UniProt agent skills for Claude Code, Codex and other agents.

A skill your agent uses when a researcher needs to query biomedical databases for biomarker discovery, build target profiles from UniProt/Open Targets/STRING, rank biomarker candidates by evidence…

aws-samples/amazon-bedrock-agents-healthcare-lifesciences

A skill your agent uses when querying biomedical databases (UniProt, ClinVar, gnomAD, PDB, Reactome, Open Targets, etc.) via the Biomni AgentCore Gateway MCP server.

aws-samples/amazon-bedrock-agents-healthcare-lifesciences

A skill your agent uses when a developer needs to conduct systematic literature searches, find research papers, extract content from publications, or build evidence summaries from biomedical…

aws-samples/amazon-bedrock-agents-healthcare-lifesciences

Retrieve and analyze AlphaFold predicted structures for a protein.

google-deepmind/science-skills

Toolkit for generating PowerToys release notes from GitHub milestone PRs or commit ranges.

smith-chem-wisc/MetaMorpheus

Query 14+ biomedical databases for drug repurposing, target discovery, clinical trials, and literature research.

FreedomIntelligence/OpenClaw-Medical-Skills

Workflow for fixing or changing RNAlysis code that talks to an EXTERNAL WEB SERVICE — UniProt, Ensembl, PANTHER, PhylomeDB, OrthoInspector, KEGG, or GO.

GuyTeichman/RNAlysis

Queries the UniProt REST API directly to search proteins, fetch FASTA sequences, map IDs between databases and read Swiss-Prot and TrEMBL entries.

davila7/claude-code-templates

多源深度调研与专业报告生成。适用场景广泛——只要用户的问题涉及需要深度分析的专业话题，就应使用此技能。包括但不限于：(1) 用户明确要求调研/research/综述/报告/发现；(2) 用户提出一个技术或科学话题，话题复杂度需要多源深度分析；(3) 用户要求对比多种技术方案的优劣；(4) 涉及生物医药、蛋白质、基因、药物靶点等需要专业数据库支撑的问题。核心能力：根据问题性质自动组合 arXiv…

AgentTeam-TaichuAI/ScienceClaw

A skill your agent uses when working with scientific research tools and workflows across bioinformatics, cheminformatics, genomics, structural biology, proteomics, and drug discovery.

ynulihao/AgentSkillOS

Primary Python tool for 40+ bioinformatics services. An agent skill from davila7/claude-code-templates.

davila7/claude-code-templates

Query public biology databases and APIs including UniProt, RCSB PDB, AlphaFold DB, ClinVar, dbSNP, gnomAD, Ensembl, GEO, InterPro, KEGG, OpenTargets, Reactome, and STRING.

DrugClaw/DrugClaw

CLI/Python toolkit for rapid bioinformatics queries. An agent skill from davila7/claude-code-templates.

davila7/claude-code-templates

Perform comprehensive gene enrichment and pathway analysis using gseapy (ORA and GSEA), PANTHER, STRING, Reactome, and 40+ ToolUniverse tools.

wu-yc/LabClaw

Access AlphaFold's 200M+ AI-predicted protein structures. An agent skill from davila7/claude-code-templates.

davila7/claude-code-templates

Access 1000+ scientific tools through ToolUniverse for drug discovery, protein analysis, genomics, literature search, clinical data, ADMET prediction, molecular docking, and more.

AgentTeam-TaichuAI/ScienceClaw

Query the DrugMechDB drug mechanism-of-action database. An agent skill from QSong-github/DrugClaw.

QSong-github/DrugClaw

Access protein metadata, function, taxonomy, and sequences across UniProtKB, UniParc, and UniRef.

google-deepmind/science-skills

Fetch a regional slice of plasma pQTL summary statistics from the UK Biobank Pharma Proteomics Project (UKB-PPP; Sun 2023 Nature) for a specific (protein, ancestry) measurement.

ClawBio/ClawBio

Performs 3D structural searches of proteins against various databases (PDB, AlphaFold, CATH, MGnify, etc.) using the Foldseek API.

google-deepmind/science-skills

Canonicalise antigen.gene and antigen.species in a VDJdb chunk against the epitope dictionary and the gene and species alias tables, detect spurious values (UniProt descriptions, "[species]"…

antigenomics/vdjdb-db

Structure similarity search with Foldseek. An agent skill from adaptyvbio/protein-design-skills.

adaptyvbio/protein-design-skills

Provides a Python interface to bioinformatics services including UniProt, KEGG, ChEMBL, Reactome, QuickGO, and UniChem.

K-Dense-AI/scientific-agent-skills

Fetch and analyze protein structures from RCSB PDB. An agent skill from adaptyvbio/protein-design-skills.

adaptyvbio/protein-design-skills

Load when converting gene identifiers between Ensembl, Entrez, and HGNC symbol in a bulk RNA-seq count matrix.

TianGzlab/OmicsClaw

Access UniProt for protein sequence and annotation retrieval.

adaptyvbio/protein-design-skills

Computational molecular biology library (sequence I/O, alignment, phylogenetics).

lamm-mit/scienceclaw

Query BindingDB for measured drug-target binding affinities (Ki, Kd, IC50, EC50).

LeonChaoX/qinyan-academic-skills

Production-ready phylogenetics and sequence analysis skill for alignment processing, tree analysis, and evolutionary metrics.

wu-yc/LabClaw

Retrieves protein structure data from RCSB PDB, PDBe, and AlphaFold with protein disambiguation, quality assessment, and comprehensive structural profiles.

wu-yc/LabClaw

Production-ready RNA-seq differential expression analysis using PyDESeq2.

wu-yc/LabClaw

Bulk-query Ensembl BioMart (and other BioMart instances) for cross-database ID mapping, gene/transcript/exon coordinates, and ortholog tables.

GPTomics/bioSkills

Plot per-gene mutation distributions on a protein-domain map (lollipop / needle plots) showing mutation position, recurrence count, and variant classification with maftools, g3-lollipop…

GPTomics/bioSkills

Query UniProt's REST API (post-2022 endpoint at rest.uniprot.org) for protein sequences, annotations, GO terms, cross-references, ID mappings, and proteomes.

GPTomics/bioSkills

Conduct comprehensive literature research with target disambiguation, evidence grading, and structured theme extraction.

wu-yc/LabClaw

Gather comprehensive biological target intelligence from 9 parallel research paths covering protein info, structure, interactions, pathways, expression, variants, drug interactions, and literature.

wu-yc/LabClaw

Systematic clinical variant interpretation from raw variant calls to ACMG-classified recommendations with structural impact analysis.

wu-yc/LabClaw

Access and analyze AlphaFold protein structure predictions. An agent skill from FreedomIntelligence/OpenClaw-Medical-Skills.

FreedomIntelligence/OpenClaw-Medical-Skills

Access over 200M protein structures from AlphaFold DB; use when you need to retrieve predicted 3D structures (PDB/mmCIF), confidence metrics (pLDDT/PAE), or protein metadata by UniProt accession.

aipoch/medical-research-skills

Unified Python access to 40+ bioinformatics web services; use when you need to query multiple databases (e.g., UniProt/KEGG/ChEMBL/Reactome) with one consistent API in a single workflow, especially…

aipoch/medical-research-skills

Unified CLI/Python interface for querying genomic, proteomic, structure, and expression data across 20+ bioinformatics databases; use when you need fast, scriptable retrieval by gene/protein IDs or…

aipoch/medical-research-skills

Direct REST API access to UniProt for protein search, entry retrieval, and identifier mapping; use when you need programmatic UniProtKB queries or cross-database ID conversion.

aipoch/medical-research-skills

Retrieves and interprets AlphaFold Protein Structure Database (AFDB) models by UniProt accession, reading pLDDT and PAE confidence correctly.

GPTomics/bioSkills

Navigate the Bio.PDB SMCRA hierarchy (Structure-Model-Chain-Residue-Atom) safely, surfacing the heterogeneity it hides by default.

GPTomics/bioSkills

Query the BindingDB drug-target binding affinity database. An agent skill from QSong-github/DrugClaw.

QSong-github/DrugClaw

Maps between gene identifier systems (Ensembl, Entrez, HGNC symbol, UniProt, RefSeq, MANE) using AnnotationDbi, biomaRt, mygene, pyensembl, and Ensembl REST.

GPTomics/bioSkills

Access AlphaFold DB's 200M+ predicted structures by UniProt ID.

jaechang-hits/SciAgent-Skills

Query EBI QuickGO REST API for GO terms and protein annotations.

jaechang-hits/SciAgent-Skills