Skill collection
LeonChaoX/qinyan-academic-skills agent skills
- skills
- 31
- GitHub stars
- 944
GitHub description: “A curated, multilingual library of 182 installable AI agent skills for end-to-end academic research—spanning literature discovery, scientific writing, grant development, bioinformatics, drug discovery, clinical research, machine learning, and data analysis.”
- Stars
- 944 (83 forks)
- Licence
- MIT
- Last push
- Jul 2026
- Created
- Feb 2026
- academic
- ai-assistant
- arxiv
- claude-code
- google-scholar
- literature-review
- openclaw
- paper-search
- pubmed
- skill
Install all skills
npx skills add LeonChaoX/qinyan-academic-skillsAdd --skill <name> for a single skill and -a <agent> to choose the agent (see the agent guides).
Skills in LeonChaoX/qinyan-academic-skills, ranked
Ranked by score. Sort bymost stars,trending,newest,recently updated
| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | Generate professional slide deck images from academic papers and content. | LeonChaoX/ | 944 | 2 repos | ~4.6k | Automated safety check: Pass | MIT | 2 mo ago |
| 2 | Search the web, extract URL content, and run deep research using the Parallel Chat API and Extract API. | LeonChaoX/ | 944 | 1 repo | ~2.9k | Automated safety check: Notes | MIT | 2 mo ago |
| 3 | Generate academic research proposals for PhD applications. An agent skill from LeonChaoX/qinyan-academic-skills. | LeonChaoX/ | 944 | 2 repos | ~4.8k | Automated safety check: Pass | MIT | 2 mo ago |
| 4 | Write comprehensive literature reviews for medical imaging AI research. | LeonChaoX/ | 944 | 3 repos | ~1.1k | Automated safety check: Notes | MIT | 2 mo ago |
| 5 | 5.Depmap Query the Cancer Dependency Map (DepMap) for cancer cell line gene dependency scores (CRISPR Chronos), drug sensitivity data, and gene effect profiles. | LeonChaoX/ | 944 | 2 repos | ~2.8k | Automated safety check: Pass | CC-BY-4.0 | 2 mo ago |
| 6 | Build and analyze phylogenetic trees using MAFFT (multiple alignment), IQ-TREE 2 (maximum likelihood), and FastTree (fast NJ/ML). | LeonChaoX/ | 944 | 2 repos | ~3.5k | Automated safety check: Pass | MIT | 2 mo ago |
| 7 | Extract cognitive patterns and thinking fingerprints from any text. | LeonChaoX/ | 944 | 1 repo | ~2.4k | Automated safety check: Pass | MIT | 2 mo ago |
| 8 | Comprehensive geospatial science skill covering remote sensing, GIS, spatial analysis, machine learning for earth observation, and 30+ scientific domains. | LeonChaoX/ | 944 | 1 repo | ~2.9k | Automated safety check: Pass | MIT | 2 mo ago |
| 9 | Query InterPro for protein family, domain, and functional site annotations. | LeonChaoX/ | 944 | 1 repo | ~2.7k | Automated safety check: Pass | CC0-1.0 | 2 mo ago |
| 10 | Run structured What-If scenario analysis with multi-branch possibility exploration. | LeonChaoX/ | 944 | 1 repo | ~2.2k | Automated safety check: Pass | MIT | 2 mo ago |
| 11 | Query BindingDB for measured drug-target binding affinities (Ki, Kd, IC50, EC50). | LeonChaoX/ | 944 | 2 repos | ~3k | Automated safety check: Pass | CC-BY-3.0 | 2 mo ago |
| 12 | Submit and manage protocols on Ginkgo Bioworks Cloud Lab (cloud.ginkgo.bio), a web-based interface for autonomous lab execution on Reconfigurable Automation Carts (RACs). | LeonChaoX/ | 944 | 2 repos | ~868 | Automated safety check: Pass | MIT | 2 mo ago |
| 13 | Query GTEx (Genotype-Tissue Expression) portal for tissue-specific gene expression, eQTLs (expression quantitative trait loci), and sQTLs. | LeonChaoX/ | 944 | 2 repos | ~2.8k | Automated safety check: Pass | CC-BY-4.0 | 2 mo ago |
| 14 | Run and analyze molecular dynamics simulations with OpenMM and MDAnalysis. | LeonChaoX/ | 944 | 2 repos | ~3.7k | Automated safety check: Pass | MIT | 2 mo ago |
| 15 | Run a multi-perspective Mind Council deliberation on any question, decision, or creative challenge. | LeonChaoX/ | 944 | — | ~2.2k | Automated safety check: Pass | MIT | 2 mo ago |
| 16 | Query cBioPortal for cancer genomics data including somatic mutations, copy number alterations, gene expression, and survival data across hundreds of cancer studies. | LeonChaoX/ | 944 | 1 repo | ~3.3k | Automated safety check: Pass | LGPL-3.0 | 2 mo ago |
| 17 | Query gnomAD (Genome Aggregation Database) for population allele frequencies, variant constraint scores (pLI, LOEUF), and loss-of-function intolerance. | LeonChaoX/ | 944 | 1 repo | ~3.1k | Automated safety check: Pass | CC0-1.0 | 2 mo ago |
| 18 | Query JASPAR for transcription factor binding site (TFBS) profiles (PWMs/PFMs). | LeonChaoX/ | 944 | 1 repo | ~3k | Automated safety check: Pass | CC0-1.0 | 2 mo ago |
| 19 | 面向 Nature Portfolio 与高影响力期刊的证据驱动科研绘图技能。用于从原始或汇总数据设计单图与多面板 figure、选择合适图形语法、编写 Python/R 绘图代码、重绘现有图件、生成机制示意图草案、撰写图注并导出可编辑 SVG/PDF 与高分辨率 TIFF/PNG；同时检查数据完整性、颜色可访问性、统计标注和最终尺寸可读性。触发场景包括 Nature… | LeonChaoX/ | 944 | — | ~600 | Automated safety check: Pass | MIT | 2 mo ago |
| 20 | 面向 Nature、Nature Communications 及高影响力期刊的可追溯投稿前评审技能。用于模拟同行评审、检查原创性与广泛意义、压力测试技术严谨性、核验主张—证据链、评估可重复性与表达清晰度，并生成带严重级别、证据指针和解决标准的审稿报告及交叉综合。触发场景包括 Nature review、模拟审稿、投稿前预审、peer review、reviewer… | LeonChaoX/ | 944 | — | ~546 | Automated safety check: Pass | MIT | 2 mo ago |
| 21 | 面向 Nature Portfolio 与高影响力期刊的实验设计一致型统计分析、审查和报告技能。用于定义独立实验单位与重复层级、制定统计分析计划、检查数据质量、选择模型与估计量、计算效应量和不确定性、处理多重比较与敏感性分析，并重写 Methods、Results、表格和图注中的统计文本。触发场景包括 Nature 统计、数据统计、statistical analysis、p… | LeonChaoX/ | 944 | — | ~639 | Automated safety check: Pass | MIT | 2 mo ago |
| 22 | 面向 Nature、Nature Communications 及同等级综合期刊的证据驱动论文写作技能。用于从已核验的结果、图表、实验记录或中英文草稿构建标题、摘要、引言、结果、方法、讨论、结论和首次投稿材料；也用于重组论文论证、建立 claim–evidence map、控制声称边界和开展投稿前完整性检查。触发场景包括 Nature 写作、论文起草、章节重写、scientific… | LeonChaoX/ | 944 | — | ~577 | Automated safety check: Pass | MIT | 2 mo ago |
| 23 | Analyze and engineer protein glycosylation. An agent skill from LeonChaoX/qinyan-academic-skills. | LeonChaoX/ | 944 | 2 repos | ~3.1k | Automated safety check: Warn | MIT | 2 mo ago |
| 24 | 沁言学术文献引用 - 先通过沁言学术OpenAPI检索文献，然后按照GB/T 7714、IEEE、APA、MLA、Chicago、Harvard等标准格式输出引用参考文献。严格遵循学术规范，未获取的信息保留省略号。触发词：文献引用、参考文献、引用格式、citation、reference format、生成引用、引用管理、参考文献格式 | LeonChaoX/ | 944 | — | ~1.1k | Automated safety check: Pass | MIT | 2 mo ago |
| 25 | 面向 Nature、Nature Communications 及高影响力期刊的学术语言重构与润色技能。用于中译英、英文精修、摘要压缩、段落逻辑修复、术语统一、语气校准、过度声称检查和去除模板化 AI 文风，同时严格保持数据、引用意图和科学含义不变。触发场景包括 Nature 润色、SCI 英文润色、academic editing、paper… | LeonChaoX/ | 944 | — | ~441 | Automated safety check: Pass | MIT | 2 mo ago |
| 26 | 沁言学术论文分析 - 对单篇学术论文进行深度分析解读，提取研究目标、方法论、主要发现和研究限制。通过沁言学术OpenAPI的analyze接口实现。触发词：论文分析、论文解读、分析论文、paper analysis、analyze paper、论文解析 | LeonChaoX/ | 944 | — | ~610 | Automated safety check: Pass | MIT | 2 mo ago |
| 27 | 沁言学术文献检索 - 支持从 Google Scholar、万方(Wanfang)、PubMed、ArXiv 四大学术数据库检索文献。智能选择检索策略：中文优先万方、英文优先Google Scholar、医学类优先PubMed、理工计算机类优先ArXiv。使用沁言学术OpenAPI。触发词：文献检索、论文搜索、搜索论文、查找文献、paper search、find papers、search… | LeonChaoX/ | 944 | — | ~918 | Automated safety check: Pass | MIT | 2 mo ago |
| 28 | 沁言学术AI选题分析 - 基于大量文献检索结果，为科研人员提供智能选题建议，包括选题方向、研究价值、研究内容概述、研究难点分析和相关文献推荐。使用沁言学术OpenAPI进行文献检索。触发词：选题分析、选题建议、研究选题、topic analysis、research topic、帮我选题、选题推荐 | LeonChaoX/ | 944 | — | ~598 | Automated safety check: Pass | MIT | 2 mo ago |
| 29 | 撰写国家自然科学基金（NSFC）申请书，覆盖青年科学基金（C类）、优秀青年科学基金（B类）、国家杰出青年科学基金（A类）2026年度最新规范。提供分阶段写作工作流：基本信息、摘要、立项依据、研究内容、研究基础、个人简历、伦理与AI辅助声明等模块；内置文献检索策略与质量自查清单。工具中性，适配 Claude Code / Cursor / Codex / OpenClaw / Gemini… | LeonChaoX/ | 944 | — | ~1.3k | Automated safety check: Pass | MIT | 2 mo ago |
| 30 | 撰写国家社会科学基金（NSSFC）年度项目申请书，依据 2025 年全国哲学社会科学工作办公室官方模板，覆盖重点项目（A）、一般项目（B）、青年项目（C）、西部项目（X）四类。提供分阶段写作工作流：数据表、选题说明（300字）、选题依据、研究内容、创新之处、研究基础、经费概算、活页匿名化等模块；内置社科文献检索策略与质量自查清单。工具中性，适配 Claude Code / Cursor /… | LeonChaoX/ | 944 | — | ~1.4k | Automated safety check: Pass | MIT | 2 mo ago |
| 31 | 沁言学术通用论文润色优化 - 按照专业学术规范对中英文学术论文、学位论文和专业报告进行语言润色，提升表达质量、逻辑连贯性和格式规范性。适用于未指定期刊的常规润色；若用户明确要求 Nature/Nature Communications 风格、章节级论证重构、声称—证据边界审查或投稿级英文精修，改用 qinyan-nature-polishing。触发词：论文润色、论文修改、润色优化、paper… | LeonChaoX/ | 944 | — | ~603 | Automated safety check: Pass | MIT | 2 mo ago |
Questions, answered from the data.
What is the best skill in LeonChaoX/qinyan-academic-skills?
Paper Slide Deck from LeonChaoX/qinyan-academic-skills ranks first of the 31 skills in LeonChaoX/qinyan-academic-skills listed here, with the highest score: its repository has 944 GitHub stars, 2 other GitHub owners carry a copy, its SKILL.md loads about 4.6k tokens and it passes the automated safety check with no findings. Next come Parallel Web and Research Proposal.
Are the skills in LeonChaoX/qinyan-academic-skills official?
None yet. All 31 skills in LeonChaoX/qinyan-academic-skills listed here come from community repositories; a skill counts as official when the product's own GitHub organization publishes it.
How do I install all skills from LeonChaoX/qinyan-academic-skills?
Run npx skills add LeonChaoX/qinyan-academic-skills in your project: the open-source skills CLI installs the repository's skills into your coding agent's skills folder. To install a single skill, open its page here for the exact command.
How are these skills ranked?
By Skill Navigator score, which combines the GitHub stars of the skill's repository (shared across that repo's skills and discounted for large collections), how many other GitHub owners carry a copy of the skill, and automated SKILL.md quality checks, minus penalties for safety-check warnings and for each further skill from the same repository. Skills that fail the safety check are not listed.