Alphafold Database Fetch And Analyze
google-deepmind/science-skills
Retrieve and analyze AlphaFold predicted structures for a protein.
Query the DrugMechDB drug mechanism-of-action database. An agent skill from QSong-github/DrugClaw.
Install Drugmechdb Query
$ npx skills add QSong-github/DrugClaw --skill drugmechdb-query -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install QSong-github/DrugClaw drugmechdb-query --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/QSong-github/DrugClaw.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/drug_mechanism/drugmechdb .claude/skills/drugmechdb-query && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "drugmechdb-query" agent skill from https://github.com/QSong-github/DrugClaw/tree/main/skills/drug_mechanism/drugmechdb into .claude/skills/drugmechdb-query/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "drugmechdb-query", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/QSong-github/DrugClaw/tree/main/skills/drug_mechanism/drugmechdbType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add QSong-github/DrugClaw --skill drugmechdb-query -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install QSong-github/DrugClaw drugmechdb-query --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/QSong-github/DrugClaw.git skills-src && mkdir -p .agents/skills && cp -r skills-src/skills/drug_mechanism/drugmechdb .agents/skills/drugmechdb-query && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "drugmechdb-query" agent skill from https://github.com/QSong-github/DrugClaw/tree/main/skills/drug_mechanism/drugmechdb into .agents/skills/drugmechdb-query/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "drugmechdb-query", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add QSong-github/DrugClaw --skill drugmechdb-query -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install QSong-github/DrugClaw drugmechdb-query --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/QSong-github/DrugClaw.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/skills/drug_mechanism/drugmechdb .cursor/skills/drugmechdb-query && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "drugmechdb-query" agent skill from https://github.com/QSong-github/DrugClaw/tree/main/skills/drug_mechanism/drugmechdb into .cursor/skills/drugmechdb-query/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "drugmechdb-query", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/QSong-github/DrugClaw.git --path skills/drug_mechanism/drugmechdb--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add QSong-github/DrugClaw --skill drugmechdb-query -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install QSong-github/DrugClaw drugmechdb-query --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/QSong-github/DrugClaw.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/skills/drug_mechanism/drugmechdb .gemini/skills/drugmechdb-query && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "drugmechdb-query" agent skill from https://github.com/QSong-github/DrugClaw/tree/main/skills/drug_mechanism/drugmechdb into .gemini/skills/drugmechdb-query/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "drugmechdb-query", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install QSong-github/DrugClaw drugmechdb-queryInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add QSong-github/DrugClaw --skill drugmechdb-query -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/QSong-github/DrugClaw.git skills-src && mkdir -p .github/skills && cp -r skills-src/skills/drug_mechanism/drugmechdb .github/skills/drugmechdb-query && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "drugmechdb-query" agent skill from https://github.com/QSong-github/DrugClaw/tree/main/skills/drug_mechanism/drugmechdb into .github/skills/drugmechdb-query/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "drugmechdb-query", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add QSong-github/DrugClaw --skill drugmechdb-query -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install QSong-github/DrugClaw drugmechdb-query --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/QSong-github/DrugClaw.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/skills/drug_mechanism/drugmechdb .opencode/skills/drugmechdb-query && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "drugmechdb-query" agent skill from https://github.com/QSong-github/DrugClaw/tree/main/skills/drug_mechanism/drugmechdb into .opencode/skills/drugmechdb-query/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "drugmechdb-query", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
Facts
- Skill name
drugmechdb-query- GitHub stars
- 116
- Used in
- 1 other repo
- Token cost
- ~734 tokens
- SKILL.md length
- 195 words
- Files
- 6
- Skills in repo
- 31
- Repo updated
- First seen
- Licence
- None found
At a glance
Query the DrugMechDB drug mechanism-of-action database. An agent skill from QSong-github/DrugClaw.
- The user asks about drug mechanisms
- SKILL.md covers Data, Entity auto-detection, API and Node types (14), plus 2 more sections
- Runs Python scripts from its folder
- Drug-to-disease paths
What it does
Drugmechdb Query is an agent skill from QSong-github/DrugClaw. Query the DrugMechDB drug mechanism-of-action database. Use whenever the user asks about drug mechanisms, drug-to-disease paths, biological targets of a drug, or wants to look up any biomedical entity (drug name, protein, disease, DrugBank ID, MESH ID, UniProt ID, GO term, etc.) in DrugMechDB.
Its SKILL.md is about 730 tokens, which your agent loads only when the skill is triggered. The skill folder holds 5 other files (for example `README.md`, `__init__.py` and `drugmechdb_skill.py`).
It sits in Research & Science. It works with UniProt. The repository describes itself as: 🦀 Agentic RAG for drug intelligence · 57 skills · 15 task categories · DTI · ADR · DDI · PGx · Repurposing · Powered by LangGraph.
When your agent uses it
- The user asks about drug mechanisms
- Drug-to-disease paths
- Biological targets of a drug
- Wants to look up any biomedical entity (drug name
Example prompts
- “/drugmechdb-query”
Requirements
- Python 3
What it can do on your machine
Read from SKILL.md and the folder at commit bc7b93e. It shows what the files ask for, not the result of running them.
Tool permissions
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Runs code
Ships script files (Python), which the agent can run.
From the folder's file list and the shell code blocks in SKILL.md.
Network
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Credentials
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Context cost
Drugmechdb Query loads about 734 tokens when it runs. Until then it costs about 78 tokens; SKILL.md has 195 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
Safety
Auto-check passed
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
SKILL.md
Without a licence we can't republish the file, so here is its outline and opening line. It has 195 words (~734 tokens).
“Search drug mechanism-of-action paths by entity name or ID. Each path is a directed graph: Drug → (intermediates) → Disease, with typed nodes and labeled edges.”
- name
- drugmechdb-query
Files
SKILL.md and 5 other files in skills/drug_mechanism/drugmechdb of QSong-github/DrugClaw.
- SKILL.md
- README.md
- __init__.py
- drugmechdb_skill.py
- example.py
- retrieve.py
Open the folder on GitHubat commit bc7b93e
Used in 1 other repository
We found 1 copy of this SKILL.md (exact, near-identical or edited) in other folders, from 1 other GitHub owner. This page covers the copy in QSong-github/DrugClaw, which our catalogue first saw on October 7, 2026.
Compare with similar skills
Drugmechdb Query next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Drugmechdb Query this skillQSong-github/DrugClaw | 116 | 1 repos | ~734 | Automated safety check: Pass | None | |
| Alphafold Database Fetch And Analyzegoogle-deepmind/science-skills | 3.2k | 2 repos | ~1.2k | Automated safety check: Pass | Apache-2.0 | |
| Biomarker Database Analysisaws-samples/amazon-bedrock-agents-healthcare-lifesciences | 274 | — | ~1.1k | Automated safety check: Pass | MIT-0 | |
| Medical Research ToolkitFreedomIntelligence/OpenClaw-Medical-Skills | 3.1k | 1 repos | ~2.4k | Automated safety check: Pass | None | |
| External API ChangeGuyTeichman/RNAlysis | 140 | — | ~1.8k | Automated safety check: Pass | MIT | |
| UniProt Database Accessdavila7/claude-code-templates | 32k | 15 repos | ~1.7k | Automated safety check: Pass | MIT |
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Related
Works with
Categories
Questions about Drugmechdb Query
What does Drugmechdb Query do?
Query the DrugMechDB drug mechanism-of-action database. An agent skill from QSong-github/DrugClaw. Drugmechdb Query is an agent skill from QSong-github/DrugClaw. Query the DrugMechDB drug mechanism-of-action database.
When should I use Drugmechdb Query?
Drugmechdb Query fits situations like: the user asks about drug mechanisms; drug-to-disease paths; biological targets of a drug; wants to look up any biomedical entity (drug name.
How do I install Drugmechdb Query in Claude Code?
Run `npx skills add QSong-github/DrugClaw --skill drugmechdb-query -a claude-code`. Or copy the skill folder (skills/drug_mechanism/drugmechdb in QSong-github/DrugClaw) into .claude/skills/drugmechdb-query in your project. Claude Code loads it when a task matches its description.
How do I install Drugmechdb Query in Codex?
Run `npx skills add QSong-github/DrugClaw --skill drugmechdb-query -a codex`. Or copy the skill folder (skills/drug_mechanism/drugmechdb in QSong-github/DrugClaw) into .agents/skills/drugmechdb-query in your project. Codex loads it when a task matches its description.
Can I use Drugmechdb Query in Cursor, Gemini CLI or GitHub Copilot?
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add QSong-github/DrugClaw --skill drugmechdb-query -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/drugmechdb-query, .gemini/skills/drugmechdb-query, .github/skills/drugmechdb-query and .opencode/skills/drugmechdb-query in your project.
What does Drugmechdb Query need to run?
Going by SKILL.md and its folder, Drugmechdb Query needs Python for the scripts in its folder. Our summary lists: Python 3.
Does Drugmechdb Query access the network?
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Is Drugmechdb Query safe to install?
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
What licence does Drugmechdb Query use?
No licence was found for Drugmechdb Query or its repository. Without one, default copyright applies: ask the author before reusing or redistributing it.
How many tokens does Drugmechdb Query use?
About 734 tokens (SKILL.md is roughly 2.9k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
What are the alternatives to Drugmechdb Query?
Skills that share tags, products or a category with Drugmechdb Query: Alphafold Database Fetch And Analyze (google-deepmind/science-skills, 3.2k stars), Biomarker Database Analysis (aws-samples/amazon-bedrock-agents-healthcare-lifesciences, 274 stars), Medical Research Toolkit (FreedomIntelligence/OpenClaw-Medical-Skills, 3.1k stars) and External API Change (GuyTeichman/RNAlysis, 140 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
Who maintains Drugmechdb Query?
QSong-github (a GitHub user) maintains it in QSong-github/DrugClaw, which has 116 GitHub stars. The repository holds 31 skills in this directory. The repository was last updated on August 25, 2026.
Source: QSong-github/DrugClaw on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.