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By wu-yc
Skills
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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | Retrieves chemical compound information from PubChem and ChEMBL with disambiguation, cross-referencing, and quality assessment. | wu-yc/ | 1.1k | 2 repos | ~2.3k | Automated safety check: Pass | No licence | 6 mo ago |
| 2 | Search and retrieve clinical practice guidelines across 12+ authoritative sources including NICE, WHO, ADA, AHA/ACC, NCCN, SIGN, CPIC, CMA, CTFPHC, GIN, MAGICapp, PubMed, EuropePMC, TRIP, and… | wu-yc/ | 1.1k | 2 repos | ~4.9k | Automated safety check: Pass | No licence | 6 mo ago |
| 3 | Generate comprehensive disease research reports using 100+ ToolUniverse tools. | wu-yc/ | 1.1k | 2 repos | ~4.7k | Automated safety check: Pass | No licence | 6 mo ago |
| 4 | Identify drug repurposing candidates using ToolUniverse for target-based, compound-based, and disease-driven strategies. | wu-yc/ | 1.1k | 2 repos | ~4.4k | Automated safety check: Pass | No licence | 6 mo ago |
| 5 | Retrieves gene expression and omics datasets from ArrayExpress and BioStudies with gene disambiguation, experiment quality assessment, and structured reports. | wu-yc/ | 1.1k | 2 repos | ~2.6k | Automated safety check: Pass | No licence | 6 mo ago |
| 6 | Perform comprehensive gene enrichment and pathway analysis using gseapy (ORA and GSEA), PANTHER, STRING, Reactome, and 40+ ToolUniverse tools. | wu-yc/ | 1.1k | 2 repos | ~4k | Automated safety check: Pass | No licence | 6 mo ago |
| 7 | Transform GWAS signals into actionable drug targets and repurposing opportunities. | wu-yc/ | 1.1k | 2 repos | ~4.7k | Automated safety check: Pass | No licence | 6 mo ago |
| 8 | Identify and prioritize causal variants at GWAS loci using statistical fine-mapping and locus-to-gene predictions. | wu-yc/ | 1.1k | 2 repos | ~3k | Automated safety check: Pass | No licence | 6 mo ago |
| 9 | Interpret genetic variants (SNPs) from GWAS studies by aggregating evidence from multiple databases (GWAS Catalog, Open Targets Genetics, ClinVar). | wu-yc/ | 1.1k | 2 repos | ~1.8k | Automated safety check: Pass | No licence | 6 mo ago |
| 10 | Compare GWAS studies, perform meta-analyses, and assess replication across cohorts. | wu-yc/ | 1.1k | 2 repos | ~2.9k | Automated safety check: Pass | No licence | 6 mo ago |
| 11 | Discover genes associated with diseases and traits using GWAS data from the GWAS Catalog (500,000+ associations) and Open Targets Genetics (L2G predictions). | wu-yc/ | 1.1k | 2 repos | ~2.2k | Automated safety check: Pass | No licence | 6 mo ago |
| 12 | Production-ready microscopy image analysis and quantitative imaging data skill for colony morphometry, cell counting, fluorescence quantification, and statistical analysis of imaging-derived… | wu-yc/ | 1.1k | 2 repos | ~4k | Automated safety check: Pass | No licence | 6 mo ago |
| 13 | Comprehensive immune repertoire analysis for T-cell and B-cell receptor sequencing data. | wu-yc/ | 1.1k | 3 repos | ~8k | Automated safety check: Pass | No licence | 6 mo ago |
| 14 | Analyze spatial transcriptomics data to map gene expression in tissue architecture. | wu-yc/ | 1.1k | 3 repos | ~6k | Automated safety check: Pass | No licence | 6 mo ago |
| 15 | Production-ready phylogenetics and sequence analysis skill for alignment processing, tree analysis, and evolutionary metrics. | wu-yc/ | 1.1k | 2 repos | ~4.2k | Automated safety check: Pass | No licence | 6 mo ago |
| 16 | Build and interpret polygenic risk scores (PRS) for complex diseases using GWAS summary statistics. | wu-yc/ | 1.1k | 2 repos | ~3.7k | Automated safety check: Pass | No licence | 6 mo ago |
| 17 | Retrieves protein structure data from RCSB PDB, PDBe, and AlphaFold with protein disambiguation, quality assessment, and comprehensive structural profiles. | wu-yc/ | 1.1k | 2 repos | ~2.8k | Automated safety check: Pass | No licence | 6 mo ago |
| 18 | Design novel protein therapeutics (binders, enzymes, scaffolds) using AI-guided de novo design. | wu-yc/ | 1.1k | 2 repos | ~4.4k | Automated safety check: Pass | No licence | 6 mo ago |
| 19 | Production-ready RNA-seq differential expression analysis using PyDESeq2. | wu-yc/ | 1.1k | 2 repos | ~4.5k | Automated safety check: Pass | No licence | 6 mo ago |
| 20 | Retrieves biological sequences (DNA, RNA, protein) from NCBI and ENA with gene disambiguation, accession type handling, and comprehensive sequence profiles. | wu-yc/ | 1.1k | 2 repos | ~2.7k | Automated safety check: Pass | No licence | 6 mo ago |
| 21 | Perform statistical modeling and regression analysis on biomedical datasets. | wu-yc/ | 1.1k | 2 repos | ~4.9k | Automated safety check: Pass | No licence | 6 mo ago |
| 22 | Comprehensive systems biology and pathway analysis using multiple pathway databases (Reactome, KEGG, WikiPathways, Pathway Commons, BioModels). | wu-yc/ | 1.1k | 2 repos | ~3.3k | Automated safety check: Pass | No licence | 6 mo ago |
| 23 | Detect and analyze adverse drug event signals using FDA FAERS data, drug labels, disproportionality analysis (PRR, ROR, IC), and biomedical evidence. | wu-yc/ | 1.1k | 2 repos | ~11k | Automated safety check: Pass | No licence | 6 mo ago |
| 24 | Comprehensive antibody engineering and optimization for therapeutic development. | wu-yc/ | 1.1k | 2 repos | ~13k | Automated safety check: Pass | No licence | 6 mo ago |
| 25 | Discover novel small molecule binders for protein targets using structure-based and ligand-based approaches. | wu-yc/ | 1.1k | 2 repos | ~12k | Automated safety check: Pass | No licence | 6 mo ago |
| 26 | Provide comprehensive clinical interpretation of somatic mutations in cancer. | wu-yc/ | 1.1k | 2 repos | ~8.9k | Automated safety check: Pass | No licence | 6 mo ago |
| 27 | Comprehensive chemical safety and toxicology assessment integrating ADMET-AI predictions, CTD toxicogenomics, FDA label safety data, DrugBank safety profiles, and STITCH chemical-protein interactions. | wu-yc/ | 1.1k | 2 repos | ~7.5k | Automated safety check: Pass | No licence | 6 mo ago |
| 28 | Strategic clinical trial design feasibility assessment using ToolUniverse. | wu-yc/ | 1.1k | 2 repos | ~11k | Automated safety check: Pass | No licence | 6 mo ago |
| 29 | AI-driven patient-to-trial matching for precision medicine and oncology. | wu-yc/ | 1.1k | 2 repos | ~13k | Automated safety check: Pass | No licence | 6 mo ago |
| 30 | Comprehensive CRISPR screen analysis for functional genomics. | wu-yc/ | 1.1k | 2 repos | ~7.9k | Automated safety check: Pass | No licence | 6 mo ago |
| 31 | Comprehensive computational validation of drug targets for early-stage drug discovery. | wu-yc/ | 1.1k | 2 repos | ~9.9k | Automated safety check: Pass | No licence | 6 mo ago |
| 32 | Production-ready genomics and epigenomics data processing for BixBench questions. | wu-yc/ | 1.1k | 2 repos | ~14k | Automated safety check: Pass | No licence | 6 mo ago |
| 33 | Predict patient response to immune checkpoint inhibitors (ICIs) using multi-biomarker integration. | wu-yc/ | 1.1k | 2 repos | ~8.3k | Automated safety check: Pass | No licence | 6 mo ago |
| 34 | Rapid pathogen characterization and drug repurposing analysis for infectious disease outbreaks. | wu-yc/ | 1.1k | 2 repos | ~5.2k | Automated safety check: Pass | No licence | 6 mo ago |
| 35 | Conduct comprehensive literature research with target disambiguation, evidence grading, and structured theme extraction. | wu-yc/ | 1.1k | 2 repos | ~8.2k | Automated safety check: Pass | No licence | 6 mo ago |
| 36 | Analyze metabolomics data including metabolite identification, quantification, pathway analysis, and metabolic flux. | wu-yc/ | 1.1k | 2 repos | ~5.9k | Automated safety check: Pass | No licence | 6 mo ago |
| 37 | Integrate and analyze multiple omics datasets (transcriptomics, proteomics, epigenomics, genomics, metabolomics) for systems biology and precision medicine. | wu-yc/ | 1.1k | 2 repos | ~6k | Automated safety check: Pass | No licence | 6 mo ago |
| 38 | Comprehensive multi-omics disease characterization integrating genomics, transcriptomics, proteomics, pathway, and therapeutic layers for systems-level understanding. | wu-yc/ | 1.1k | 2 repos | ~10k | Automated safety check: Pass | No licence | 6 mo ago |
| 39 | Construct and analyze compound-target-disease networks for drug repurposing, polypharmacology discovery, and systems pharmacology. | wu-yc/ | 1.1k | 2 repos | ~12k | Automated safety check: Pass | No licence | 6 mo ago |
| 40 | Analyze drug safety signals from FDA adverse event reports, label warnings, and pharmacogenomic data. | wu-yc/ | 1.1k | 2 repos | ~5.5k | Automated safety check: Pass | No licence | 6 mo ago |
| 41 | Comprehensive patient stratification for precision medicine by integrating genomic, clinical, and therapeutic data. | wu-yc/ | 1.1k | 2 repos | ~12k | Automated safety check: Pass | No licence | 6 mo ago |
| 42 | Provide actionable treatment recommendations for cancer patients based on molecular profile. | wu-yc/ | 1.1k | 2 repos | ~8.4k | Automated safety check: Pass | No licence | 6 mo ago |
| 43 | Analyze mass spectrometry proteomics data including protein quantification, differential expression, post-translational modifications (PTMs), and protein-protein interactions. | wu-yc/ | 1.1k | 2 repos | ~6.6k | Automated safety check: Pass | No licence | 6 mo ago |
| 44 | Provide differential diagnosis for patients with suspected rare diseases based on phenotype and genetic data. | wu-yc/ | 1.1k | 2 repos | ~9.7k | Automated safety check: Pass | No licence | 6 mo ago |
| 45 | Computational analysis framework for spatial multi-omics data integration. | wu-yc/ | 1.1k | 2 repos | ~12k | Automated safety check: Pass | No licence | 6 mo ago |
| 46 | Comprehensive structural variant (SV) analysis skill for clinical genomics. | wu-yc/ | 1.1k | 2 repos | ~12k | Automated safety check: Pass | No licence | 6 mo ago |
| 47 | Gather comprehensive biological target intelligence from 9 parallel research paths covering protein info, structure, interactions, pathways, expression, variants, drug interactions, and literature. | wu-yc/ | 1.1k | 2 repos | ~13k | Automated safety check: Pass | No licence | 6 mo ago |
| 48 | Systematic clinical variant interpretation from raw variant calls to ACMG-classified recommendations with structural impact analysis. | wu-yc/ | 1.1k | 2 repos | ~9.5k | Automated safety check: Pass | No licence | 6 mo ago |