Academic Research Suite for Codex
Imbad0202/academic-research-skills-codex
A router skill that sends academic work such as literature reviews, drafting, citation checks, peer review and revision to the right workflow in the ARS suite.
Orchestrates a ten-stage academic workflow from research to finished manuscript, including integrity checks, two rounds of peer review and revision.
Install Academic Research Pipeline
$ npx skills add Imbad0202/academic-research-skills --skill academic-pipeline -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install Imbad0202/academic-research-skills academic-pipeline --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/Imbad0202/academic-research-skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/academic-pipeline .claude/skills/academic-pipeline && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "academic-pipeline" agent skill from https://github.com/Imbad0202/academic-research-skills/tree/main/academic-pipeline into .claude/skills/academic-pipeline/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "academic-pipeline", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/Imbad0202/academic-research-skills/tree/main/academic-pipelineType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add Imbad0202/academic-research-skills --skill academic-pipeline -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install Imbad0202/academic-research-skills academic-pipeline --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/Imbad0202/academic-research-skills.git skills-src && mkdir -p .agents/skills && cp -r skills-src/academic-pipeline .agents/skills/academic-pipeline && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "academic-pipeline" agent skill from https://github.com/Imbad0202/academic-research-skills/tree/main/academic-pipeline into .agents/skills/academic-pipeline/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "academic-pipeline", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add Imbad0202/academic-research-skills --skill academic-pipeline -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install Imbad0202/academic-research-skills academic-pipeline --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/Imbad0202/academic-research-skills.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/academic-pipeline .cursor/skills/academic-pipeline && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "academic-pipeline" agent skill from https://github.com/Imbad0202/academic-research-skills/tree/main/academic-pipeline into .cursor/skills/academic-pipeline/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "academic-pipeline", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/Imbad0202/academic-research-skills.git --path academic-pipeline--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add Imbad0202/academic-research-skills --skill academic-pipeline -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install Imbad0202/academic-research-skills academic-pipeline --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/Imbad0202/academic-research-skills.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/academic-pipeline .gemini/skills/academic-pipeline && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "academic-pipeline" agent skill from https://github.com/Imbad0202/academic-research-skills/tree/main/academic-pipeline into .gemini/skills/academic-pipeline/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "academic-pipeline", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install Imbad0202/academic-research-skills academic-pipelineInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add Imbad0202/academic-research-skills --skill academic-pipeline -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/Imbad0202/academic-research-skills.git skills-src && mkdir -p .github/skills && cp -r skills-src/academic-pipeline .github/skills/academic-pipeline && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "academic-pipeline" agent skill from https://github.com/Imbad0202/academic-research-skills/tree/main/academic-pipeline into .github/skills/academic-pipeline/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "academic-pipeline", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add Imbad0202/academic-research-skills --skill academic-pipeline -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install Imbad0202/academic-research-skills academic-pipeline --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/Imbad0202/academic-research-skills.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/academic-pipeline .opencode/skills/academic-pipeline && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "academic-pipeline" agent skill from https://github.com/Imbad0202/academic-research-skills/tree/main/academic-pipeline into .opencode/skills/academic-pipeline/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "academic-pipeline", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
Facts
- Skill name
academic-pipeline- GitHub stars
- 51k
- Token cost
- ~15k tokens
- SKILL.md length
- 6,116 words
- Files
- 31 (incl. references)
- Skills in repo
- 5
- Repo updated
- First seen
- Licence
- Custom licence
At a glance
Orchestrates a ten-stage academic workflow from research to finished manuscript, including integrity checks, two rounds of peer review and revision.
- Works in 4 steps: INTAKE & DETECTION → MODE RECOMMENDATION → STAGE EXECUTION → …
- Taking a research idea all the way to a reviewed, revised manuscript
- SKILL.md covers Quick Start, Pasted and retrieved text is…, Trigger Conditions and Pipeline Stages (10 Stages), plus 10 more sections
- Calls python3
What it does
This is a lightweight orchestrator rather than a worker. It detects which stage a project is at, recommends a mode, dispatches the deep-research, academic-paper and academic-paper-reviewer skills, manages the handoffs between stages and tracks state. The flow runs research, writing, an integrity check, review, revision, re-review, a second revision, a final integrity check and finalization.
Integrity checks are required at set points and limited to what they can cover, review happens in two stages, and each stage leaves auditable quality-assurance artifacts. Routing is explicit: slash commands starting with `/ars-` or clear phrases like reviewing a paper go straight to the matching skill, and a `[direct-mode]` prefix on the first message skips cross-phase clarification. Supporting files include agents for orchestration, state tracking, integrity verification and claim-to-reference audits, plus worked examples of a full run, a mid-pipeline start and recovery from an integrity failure.
When your agent uses it
- Taking a research idea all the way to a reviewed, revised manuscript
- Starting mid-way with an existing draft that needs review and revision
- Running integrity checks and a second review round before submission
- Recovering after an integrity check flags problems in a draft
Example prompts
- “Run the full paper pipeline on my study of remote work and team productivity, starting from the research question.”
- “I have a finished draft in ./paper/draft.docx. Pick up the pipeline at the review stage.”
- “The integrity check flagged mismatched citations. Show me how to recover and re-run it.”
Requirements
- The deep-research, academic-paper and academic-paper-reviewer skills
Workflow steps
4 steps, taken from the step headings in SKILL.md.
- INTAKE & DETECTION
- MODE RECOMMENDATION
- STAGE EXECUTION
- TRANSITION
What it can do on your machine
Read from SKILL.md and the folder at commit ebc21bf. It shows what the files ask for, not the result of running them.
Tool permissions
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Runs code
Shell commands in SKILL.md call:
python3
From the folder's file list and the shell code blocks in SKILL.md.
Network
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Credentials
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Context cost
Academic Research Pipeline loads about 15k tokens when it runs, and up to ~67k if it reads all its reference files. Until then it costs about 200 tokens; SKILL.md has 6,116 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
Safety
Auto-check passed
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
SKILL.md
Its licence (Custom licence) doesn't allow us to republish the file, so here is its outline and opening line. It has 6,116 words (~14,688 tokens).
“A lightweight orchestrator that manages the complete academic pipeline from research exploration to final manuscript. It does not perform substantive work — it only detects stages, recommends modes, dispatches skills, manages transitions, and tracks state.”
- name
- academic-pipeline
- metadata.version
- 3.23.0
- metadata.last_updated
- 2026-10-03
- metadata.depends_on
- deep-research, academic-paper, academic-paper-reviewer
- metadata.status
- active
- metadata.data_access_level
- raw
- metadata.task_type
- open-ended
- metadata.related_skills
- deep-research, academic-paper, academic-paper-reviewer
Files
SKILL.md and 30 other files (references) in academic-pipeline of Imbad0202/academic-research-skills.
- SKILL.md
- agents/claim_ref_alignment_audit_agent.md
- agents/collaboration_depth_agent.md
- agents/integrity_verification_agent.md
- agents/pipeline_orchestrator_agent.md
- agents/state_tracker_agent.md
- examples/full_pipeline_example.md
- examples/integrity_failure_recovery.md
- examples/mid_entry_example.md
- references/adapters/.gitkeep
- references/adapters/overview.md
- references/ai_research_failure_modes.md
- references/changelog.md
- references/claim_audit_calibration_protocol.md
- references/claim_verification_protocol.md
- references/external_review_protocol.md
- references/integrity_review_protocol.md
- … and 14 more
Open the folder on GitHubat commit ebc21bf
Compare with similar skills
Academic Research Pipeline next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Academic Research Pipeline this skillImbad0202/academic-research-skills | 51k | — | ~15k | Automated safety check: Pass | Custom licence | |
| Academic Research Suite for CodexImbad0202/academic-research-skills-codex | 12k | — | ~12k | Automated safety check: Pass | Custom licence | |
| Social Science Paper Writingfakerqwq/social-science-paper-writing-skill | 382 | — | ~7k | Automated safety check: Pass | None | |
| Scholar Evaluationjimmc414/Kosmos | 595 | 1 repos | ~2.5k | Automated safety check: Pass | None | |
| ResearchClaw Research Pipelineaiming-lab/AutoResearchClaw | 15k | — | ~1k | Automated safety check: Pass | MIT | |
| Generate ReportGRIND-Lab-Core/night_owl_research_agent | 106 | — | ~2.2k | Automated safety check: Notes | None |
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Related
Categories
Questions about Academic Research Pipeline
What does Academic Research Pipeline do?
Orchestrates a ten-stage academic workflow from research to finished manuscript, including integrity checks, two rounds of peer review and revision. This is a lightweight orchestrator rather than a worker. It detects which stage a project is at, recommends a mode, dispatches the deep-research, academic-paper and academic-paper-reviewer skills, manages the handoffs between stages and tracks state.
When should I use Academic Research Pipeline?
Academic Research Pipeline fits situations like: taking a research idea all the way to a reviewed, revised manuscript; starting mid-way with an existing draft that needs review and revision; running integrity checks and a second review round before submission; recovering after an integrity check flags problems in a draft.
How do I install Academic Research Pipeline in Claude Code?
Run `npx skills add Imbad0202/academic-research-skills --skill academic-pipeline -a claude-code`. Or copy the skill folder (academic-pipeline in Imbad0202/academic-research-skills) into .claude/skills/academic-pipeline in your project. Claude Code loads it when a task matches its description.
How do I install Academic Research Pipeline in Codex?
Run `npx skills add Imbad0202/academic-research-skills --skill academic-pipeline -a codex`. Or copy the skill folder (academic-pipeline in Imbad0202/academic-research-skills) into .agents/skills/academic-pipeline in your project. Codex loads it when a task matches its description.
Can I use Academic Research Pipeline in Cursor, Gemini CLI or GitHub Copilot?
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add Imbad0202/academic-research-skills --skill academic-pipeline -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/academic-pipeline, .gemini/skills/academic-pipeline, .github/skills/academic-pipeline and .opencode/skills/academic-pipeline in your project.
What does Academic Research Pipeline need to run?
Going by SKILL.md and its folder, Academic Research Pipeline needs the command-line tools its instructions call (python3). Our summary lists: The deep-research, academic-paper and academic-paper-reviewer skills.
Does Academic Research Pipeline access the network?
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Is Academic Research Pipeline safe to install?
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
What licence does Academic Research Pipeline use?
Academic Research Pipeline has a licence file (the repository's licence) that doesn't match a standard licence. Read it on GitHub before reusing the skill.
How many tokens does Academic Research Pipeline use?
About 15k tokens (SKILL.md is roughly 59k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full. Its references folder adds about 52k tokens, read only when the agent opens those files.
What are the alternatives to Academic Research Pipeline?
Skills that share tags, products or a category with Academic Research Pipeline: Academic Research Suite for Codex (Imbad0202/academic-research-skills-codex, 12k stars), Social Science Paper Writing (fakerqwq/social-science-paper-writing-skill, 382 stars), Scholar Evaluation (jimmc414/Kosmos, 595 stars) and ResearchClaw Research Pipeline (aiming-lab/AutoResearchClaw, 15k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
Who maintains Academic Research Pipeline?
Imbad0202 (a GitHub user) maintains it in Imbad0202/academic-research-skills, which has 51,242 GitHub stars. The repository holds 5 skills in this directory. The repository was last updated on October 10, 2026.
Source: Imbad0202/academic-research-skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.