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PubMed
Skills
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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | Screens records for systematic, scoping and rapid reviews against fixed eligibility rules, using two blinded AI reviewers and a third adjudicator, with traceable PRISMA counts. | Imbad0202/ | 51k | — | ~8.4k | Automated safety check: Pass | Unknown | today |
| 2 | Conduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). | neflibata-feng/ | 126 | 20 repos | ~5.9k | Automated safety check: Notes | MIT | today |
| 3 | Finds papers in OpenAlex, PubMed and Google Scholar, turns DOIs, PMIDs and arXiv IDs into clean BibTeX, and validates citations for a manuscript or thesis. | K-Dense-AI/ | 2.4k | 2 repos | ~3.9k | Automated safety check: Notes | MIT | 2 days ago |
| 4 | Comprehensive citation management for academic research. An agent skill from neflibata-feng/MyArxiv-Agent. | neflibata-feng/ | 126 | 19 repos | ~8.1k | Automated safety check: Notes | MIT | today |
| 5 | Search, download, and read academic papers from 20+ sources (arXiv, PubMed, Semantic Scholar, CrossRef, etc). | openags/ | 2.8k | — | ~1.2k | Automated safety check: Notes | MIT | 9 days ago |
| 6 | A skill your agent uses when users ask to 找文献、做文献检索、查论文、查临床试验、核验引用、去重文献、设计 PubMed/MeSH 检索式、追踪上下游引文、解析 DOI/PMID/PMCID/arXiv/OpenAlex/Semantic Scholar/NCT ID, 或导出 RIS、BibTeX、NBIB、ENW;also use for… | wp-a/ | 304 | — | ~1.4k | Automated safety check: Pass | MIT | 9 days ago |
| 7 | Recommends journals for a manuscript by filtering a bundled impact-factor catalog, verifying scope and quality online, and writing a ranked Markdown report. | huangwb8/ | 2.9k | — | ~1.7k | Automated safety check: Pass | MIT | 7 days ago |
| 8 | Search, download, and read academic papers through the paper-search MCP tools (mcppaper-search), covering arXiv, PubMed, bioRxiv, Semantic Scholar, Crossref, OpenAlex and 15+ other sources. | openags/ | 2.8k | — | ~794 | Automated safety check: Notes | MIT | 9 days ago |
| 9 | Deterministic deep research via RivalSearchMCP. An agent skill from damionrashford/RivalSearchMCP. | damionrashford/ | 132 | — | ~796 | Automated safety check: Pass | MIT | yesterday |
| 10 | Finds papers across literature sources, verifies and converts citations, builds MeSH strategies and audits independent citations of a paper. | Yuan1z0825/ | 47k | — | ~884 | Automated safety check: Pass | Apache-2.0 | today |
| 11 | Multi-source literature search, citation verification, MeSH search strategy, citation file management (.nbib/.ris/.bib conversion), and reference management (BibTeX, related articles, ID conversion)… | jing1312/ | 171 | — | ~1.3k | Automated safety check: Notes | MIT | 1 mo ago |
| 12 | 12.Paper Search 学术文献检索与论文获取调度器,基于 paper-search CLI,而不是 MCP server. An agent skill from dr-dumpling/paper-search-cli. | dr-dumpling/ | 135 | — | ~1.1k | Automated safety check: Pass | MIT | 3 mo ago |
| 13 | Search and retrieve clinical practice guidelines across 12+ authoritative sources including NICE, WHO, ADA, AHA/ACC, NCCN, SIGN, CPIC, CMA, CTFPHC, GIN, MAGICapp, PubMed, EuropePMC, TRIP, and… | wu-yc/ | 1.1k | 2 repos | ~4.9k | Automated safety check: Pass | No licence | 6 mo ago |
| 14 | 14.Paper Lookup Search 10 academic literature APIs for papers, preprints, citations, and open-access full text, and return results with reproducible provenance. | spacering-net/ | 3.9k | — | ~3.7k | Automated safety check: Notes | MIT | today |
| 15 | Publish proofread VDJdb chunks through dev, reconcile publication issues, preserve record identity, keep validation changes separate, and close completed imports while tracking unresolved… | antigenomics/ | 157 | — | ~2k | Automated safety check: Pass | Unknown | today |
| 16 | Exhaustively verify English and Chinese manuscript references before journal submission. | Liuxiangjian-ai/ | 140 | — | ~5.4k | Automated safety check: Pass | MIT | 4 mo ago |
| 17 | 中文文献检索、筛选、批量采集和合法全文获取助手。用于用户需要查找论文、下载可合法获取的 PDF/HTML/XML 全文、生成关键词和检索式、查询 DOI/PMID、筛选高影响因子或高分区期刊、检查开放获取、做引用链扩展、批量文献候选表、下载日志、去重清单、Zotero/BibTeX 整理,或解决文献难下载问题;禁止绕过付费墙、盗版下载、共享账号或规避版权限制。 | Lucaswangzcx/ | 239 | — | ~1.4k | Automated safety check: Pass | MIT | 5 mo ago |
| 18 | Runs systematic, scoping or narrative literature reviews across PubMed, arXiv, bioRxiv and Semantic Scholar, with citation checks and Markdown or PDF output. | K-Dense-AI/ | 48k | 1 repo | ~3.2k | Automated safety check: Notes | MIT | 5 days ago |
| 19 | 多源深度调研与专业报告生成。适用场景广泛——只要用户的问题涉及需要深度分析的专业话题,就应使用此技能。包括但不限于:(1) 用户明确要求调研/research/综述/报告/发现;(2) 用户提出一个技术或科学话题,话题复杂度需要多源深度分析;(3) 用户要求对比多种技术方案的优劣;(4) 涉及生物医药、蛋白质、基因、药物靶点等需要专业数据库支撑的问题。核心能力:根据问题性质自动组合 arXiv… | AgentTeam-TaichuAI/ | 671 | — | ~5.7k | Automated safety check: Pass | No licence | 5 mo ago |
| 20 | Searches PubMed directly through its E-utilities REST API, with guidance on Boolean and MeSH query syntax, batch retrieval and citation data. | davila7/ | 33k | 14 repos | ~3.9k | Automated safety check: Pass | MIT | today |
| 21 | Local workflow that searches PubMed, Europe PMC, Crossref and OpenAlex for topic keywords, downloads accessible PDFs into a PDF-only folder and removes duplicates. | Jinze-Lee/ | 109 | — | ~952 | Automated safety check: Pass | MIT | 5 mo ago |
| 22 | A skill your agent uses when writing literature review sections - guides searching, organizing, and synthesizing academic sources | Norman-bury/ | 3.4k | — | ~2.2k | Automated safety check: Notes | MIT | 4 mo ago |
| 23 | Query 14+ biomedical databases for drug repurposing, target discovery, clinical trials, and literature research. | FreedomIntelligence/ | 3.1k | 1 repo | ~2.4k | Automated safety check: Pass | No licence | 2 mo ago |
| 24 | 24.Paper Lookup Search 10 academic paper databases via REST APIs for research papers, preprints, and scholarly articles. | zLanqing/ | 4.7k | 2 repos | ~2.4k | Automated safety check: Notes | MIT | 5 mo ago |
| 25 | Conduct literature searches for meta-analysis using Python with uv, query PubMed and other databases, deduplicate results, and store round-based bibliographies with notes. | htlin222/ | 139 | — | ~2.1k | Automated safety check: Notes | Unknown | 18 days ago |
| 26 | 26.Biopython Primary Python toolkit for molecular biology. An agent skill from davila7/claude-code-templates. | davila7/ | 33k | 12 repos | ~3.4k | Automated safety check: Pass | MIT | today |
| 27 | Search PubMed for scientific literature, including published clinical trials. | google-deepmind/ | 3.2k | 2 repos | ~2.1k | Automated safety check: Notes | Apache-2.0 | yesterday |
| 28 | 28.Tooluniverse Access 1000+ scientific tools through ToolUniverse for drug discovery, protein analysis, genomics, literature search, clinical data, ADMET prediction, molecular docking, and more. | AgentTeam-TaichuAI/ | 671 | — | ~1.2k | Automated safety check: Pass | No licence | 5 mo ago |
| 29 | Retrieve protein and nucleotide sequences from NCBI databases using E-utilities. | google-deepmind/ | 3.2k | 1 repo | ~2.3k | Automated safety check: Notes | Apache-2.0 | yesterday |
| 30 | Recommends target journals for manuscript submission by analyzing the paper topic/abstract and the journal distribution of similar PubMed literature; use when users ask for journal… | aipoch/ | 1.9k | — | ~1.7k | Automated safety check: Pass | MIT | 24 days ago |
| 31 | Turns DOIs, PMIDs and arXiv IDs into clean BibTeX, searches Google Scholar and PubMed, and checks and deduplicates a reference list. | foryourhealth111-pixel/ | 3.6k | — | ~7.6k | Automated safety check: Notes | MIT | 1 mo ago |
| 32 | Zero-cost fallback for the argo search skill, wrapping 29 local engines for web, news, academic, code and reference queries when paid API quota should be saved. | taxueseek/ | 188 | — | ~949 | Automated safety check: Pass | MIT | 4 days ago |
| 33 | 33.Sci Search Academic paper search and metrics analysis. An agent skill from ShZhao27208/Aut_Sci_Write. | ShZhao27208/ | 209 | — | ~1.7k | Automated safety check: Notes | MIT | 1 mo ago |
| 34 | Routes literature searches through the PaperSeek launcher, picks suitable scholarly sources, parses JSON output and keeps API keys out of the chat. | MingfengHong/ | 0 | — | ~1.6k | Automated safety check: Pass | Apache-2.0 | yesterday |
| 35 | Programmatic PubMed access via NCBI E-utilities REST API. An agent skill from jaechang-hits/SciAgent-Skills. | jaechang-hits/ | 374 | 1 repo | ~4.4k | Automated safety check: Pass | CC-BY-4.0 | 12 days ago |
| 36 | Lays out a systematic literature review method: PICO-based search strategy, inclusion criteria, PRISMA screening, quality assessment tools and synthesis approaches. | aiming-lab/ | 15k | — | ~709 | Automated safety check: Pass | MIT | 1 mo ago |
| 37 | Direct PubMed and NCBI E-utilities search workflows for biomedical literature, MeSH queries, PMID lookup, citation retrieval, and API-backed literature monitoring. | affaan-m/ | 277k | 1 repo | ~1.2k | Automated safety check: Pass | MIT | today |
| 38 | Semantic Similarity Index for disease research literature using PubMedBERT embeddings | ClawBio/ | 1.2k | 3 repos | ~1.4k | Automated safety check: Pass | MIT | yesterday |
| 39 | Produce an intensive, cited analytical report: executive summary, multi-angle findings, contrarian views, open questions, and full sources. | firecrawl/ | 117 | — | ~1.4k | Automated safety check: Pass | ISC | 2 days ago |
| 40 | Searches and fetches PubMed and PMC via NCBI E-utilities (ESearch then EFetch/ESummary) to gather biomedical evidence and build text corpora. | maziyarpanahi/ | 5.5k | — | ~1.7k | Automated safety check: Pass | Apache-2.0 | today |
| 41 | 41.Sci Download 学术论文 PDF 下载。支持 8 个数据源:Elsevier、Springer Nature、IEEE Xplore、 arXiv、Unpaywall、Semantic Scholar、PubMed Central、知网(CNKI)。 | ShZhao27208/ | 209 | — | ~1k | Automated safety check: Notes | MIT | 1 mo ago |
| 42 | Multi-database literature search and search-strategy design that outputs structured, reproducible result lists; use when you need reference retrieval, systematic searching, review topic selection… | aipoch/ | 1.9k | — | ~2k | Automated safety check: Pass | MIT | 24 days ago |
| 43 | 43.Biopython Provides Biopython workflows for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed access (Bio.Entrez). | K-Dense-AI/ | 48k | 1 repo | ~4.3k | Automated safety check: Notes | MIT | 5 days ago |
| 44 | analyze a professor from google scholar, publication lists, personal websites, lab pages, and field-specific bibliographic databases (e.g., DBLP, PubMed, SSRN, PhilPapers, MathSciNet, arXiv, Scopus)… | voidful/ | 135 | — | ~13k | Automated safety check: Pass | MIT | 6 mo ago |
| 45 | 45.Biopython Computational molecular biology library (sequence I/O, alignment, phylogenetics). | lamm-mit/ | 246 | — | ~3.9k | Automated safety check: Pass | Apache-2.0 | 1 mo ago |
| 46 | Multi-source literature search, citation verification, strict independent other-citation audits, article-level citation metric tables, influential citer profiling with citation-context extraction… | Tai609/ | 100 | — | ~1.2k | Automated safety check: Pass | Unknown | 1 mo ago |
| 47 | 47.Bgpt MCP Search scientific papers via the BGPT MCP server and retrieve structured experimental data — methods, results, conclusions, quality scores, and 25+ metadata fields per paper. | ClawBio/ | 1.2k | 1 repo | ~3.2k | Automated safety check: Pass | MIT | yesterday |
| 48 | Search PubMed and bioRxiv for bioinformatics literature, synthesise results into a structured report, and build a citation graph — all locally, with a reproducibility bundle. | ClawBio/ | 1.2k | 1 repo | ~2.5k | Automated safety check: Pass | MIT | yesterday |