Research & Science · For researchers

GOD MODE deep research skill. An agent skill from shobcoder/shob.

shobcoder/shob

Finds, annotates, cites and tracks academic papers through subcommands for searching, turning a PDF into an annotated webpage, and daily paper discovery.

sjqsgg/Paperwise

数学建模竞赛解题全流程指导。覆盖国赛(CUMCM)和美赛(MCM/ICM)全部题型(A-F)，提供12种问题本质分析、95+场景模型决策矩阵、5本算法Cookbook、11本完整例题Playbook、22个Python+7个MATLAB可运行代码模板。与math-modeling-paper形成"解题→写作"配对。当用户提及建模思路、选什么模型、怎么建模、赛题求解、粘贴赛题文本、美赛/国赛题目分…

Lupynow/math-modeling-skills

Build a markdown baseline table for a research topic using deepxiv search, brief, head, and experiment-section reads, extracting paper title, URL, open-source status, datasets, benchmark scores, and…

DeepXiv/deepxiv_sdk

Find and read papers from the local papers library (repo papers/, mounted at /papers/).

CamusGIT/EvoQuant

A skill your agent uses when the user provides one or more academic PDF files or an existing BibTeX file and wants the search-bibtex binary to extract metadata, fuzzy-search bibliographic sources…

steeliron550-ui/search-bibtex

Route NVIDIA Parabricks pbrun tools, assess GPU/runtime readiness, and provide version-aware command guidance for FASTQ/BAM processing, RNA-seq, variant calling, BAM QC, and GVCF workflows.

NVIDIA-BioNeMo/bionemo-agent-toolkit

Download remote content (arxiv papers, YouTube videos, Bilibili videos) to local storage and route to downstream grounding pipeline.

gaotiexinqu/OneResearchClaw

系统阅读、解释和批判性分析单篇 arXiv AI / 机器人论文，并生成一份主线清楚、核心内容不缺失、审稿证据可追溯的自包含 Markdown 报告。适用于 arXiv 链接、ID 或其 PDF 的精读、方法/理论/系统讲解、完整 Claim 审查、实验/证明/协议/代码证据核对、相关文献定位和复现或验证判断；默认执行完整精读，仅在用户明确要求速读时缩减覆盖范围。当前流水线不支持无法解析出…

sodalone/paper-reading-skill

Plans and audits runs of the HypoGeniC and HypoRefine packages, which propose hypotheses from labeled text datasets, with local checks before any model call.

K-Dense-AI/scientific-agent-skills

Makes each number in a LaTeX paper link back to the code line that produced it, using hypertarget and hyperlink tags and compile-time `\num` formulas.

lingzhi227/agent-research-skills

A skill your agent uses when the user asks to write or draft an ORIGINAL RESEARCH ARTICLE — IMRaD paper, conference paper, short/workshop paper, 研究论文/期刊论文/会议论文 — reporting their own completed…

luwill/research-skills

Run SnpEff, a variant annotation and effect prediction tool for genomic variants.

pcingola/SnpEff

Explains a research paper to a non-specialist reader: what was studied, what was contributed, how the findings follow, and what the evidence does not establish.

lijigang/ljg-skill-paper

Chinese-language helper for the objectives, research content and key scientific questions sections of an NSFC grant application, tuned to the project type.

HuiyuLi-2000/Chinese-Grant-Writer-Skills

Grounds a coding agent's architecture decisions in real arXiv prior art before it builds something new.

UditAkhourii/neuroarxiv

Perform advanced Google Scholar search with filters - author, journal, date range, exact phrase, title-only.

cookjohn/gs-skills

Generates structured literature survey reports from collected papers using a multi-stage pipeline: outline generation (query-type adaptive) → draft survey → section-by-section expansion → summary…

EvoScientist/EvoSkills

Guide for contributing to the stata-skill project. An agent skill from dylantmoore/stata-skill.

dylantmoore/stata-skill

Decision-grade research, three ways: draft a deep-research prompt for the user to run in their own tool (ChatGPT, Gemini, Grok, Perplexity, …), process a finished research report — file it, distill…

delorenj/mcp-server-trello

A skill your agent uses when a contributor wants to create, repair, or complete an OpenRSI-Index AutoResearch task proposal grounded in a remote model-development repository, including…

OpenRSI-Foundation/OpenRSI-Index

Guides you through writing a systematic literature review to the PRISMA 2020 checklist, producing a journal-format Word manuscript, a flow diagram and APA 7th references.

keemanxp/slr-prisma

Summarize, organize, and normalize messy research materials into an IEEE-ready writing brief before manuscript drafting.

CloudWave818/ieee-skills

Runs a survey-grade literature investigation: fixes the research questions, searches from adversarial angles, verifies citations and writes an evidence-first report.

HKUSTDial/Supervisor-Skills

Builds or loads a genome-scale metabolic model in COBRApy, sets its growth medium and objective, and exports it as a validated JSON file for flux analysis.

aiming-lab/AutoResearchClaw

Score, embed, and generate DNA sequences with Evo 2, a long-context genomic foundation model.

JimLiu/science-skills

Recommends five pairs of NSFC application codes, primary and secondary, from a grant proposal's text and writes the reasons to a Markdown report.

huangwb8/ChineseResearchLaTeX

Turn vague or partially formed AI, computer-science, data-driven, and engineering-method research directions into evidence-grounded, falsifiable, paper-ready Research Idea Briefs through heuristic…

cpt13-g/clarify-research-idea

End-to-end paper reproduction from arxiv URL through smoke runs to replication experiments.

fcakyon/phd-skills

A skill your agent uses when the user asks for discovery-scale research that informs a decision: brainstorming a project or feature, choosing a technology, or requests like "research X", "what's the…

DanMcInerney/architect-loop

Prepare PBS HPC jobs, choose allocation and filesystem settings, submit and monitor jobs, and diagnose job output.

argonne-lcf/ChemGraph

Judge and reshape the story told by an entire paper figure deck.

aipoch/open-science

从 news/source-from-doc.md 和 news/source-daily.md 中识别论文与综述标题，在线搜索 arXiv、期刊或实验室页面等原文来源，使用 WebSearch/WebFetch 抓取可公开的摘要或介绍内容，结合本仓库已有整理生成结构化中文摘要 Markdown 文件到 news/papers/ 下，并可选在 news/source-daily.md…

Xbotics-Embodied-AI-club/Xbotics-Embodied-Guide

A skill your agent uses when the user wants a paper audited for integrity issues — image misuse, numerical anomalies, logical gaps — and needs a reviewable evidence report.

ai4s-research/ai4s-skills

Query TCGA tumor biology through the ucscxenatoolspy API. An agent skill from ClawBio/ClawBio.

ClawBio/ClawBio

Create a new model wrapper for the PhysicsNeMo CFD benchmarking workflow.

NVIDIA/physicsnemo-cfd

Builds conference-size scientific posters in LaTeX with beamerposter, tikzposter or baposter, including figure preparation, compilation and print preflight checks.

K-Dense-AI/claude-scientific-writer

论文精读：把一篇论文讲透，不只是译出来。用户说“讲透这篇”“精读这篇”“这篇到底是怎么想出来的”“x-ray 一下”时使用——先通读全文含附录，还原作者真实的思考起点、押的那个赌注和证据落在哪，把每个符号和关键公式落到能自己动手算的小例子上，再怀疑式地过一遍超参、消融、基线和数字。产出写进 EasyRead 的页边讨论条目并锚到对应段落，也可以另存一份长文 Markdown。用于…

Edwardxlai/easyread

Systematic framework for evaluating scholarly and research work based on the ScholarEval methodology.

jimmc414/Kosmos

Independently verify Lean mathematical proofs in awards PRs, Erdős problems, or pinned source revisions.

TheJustinSunPrize/awards

Design and run computational protein and ligand workflows on a GPU: binder and enzyme design, de novo backbone generation, inverse folding and sequence redesign, structure prediction, protein-ligand…

locbp-uzh/biopipelines

Generate sashimi-style genome visualization plots (coverage, line, heatmap, IGV read-by-read, HiC, circRNA, motif) from BAM/bigWig/depth/HiC inputs.

ygidtu/trackplot

Transform Claude Code into an AI Scientist that orchestrates research workflows using tree-based hypothesis exploration.

sundial-org/skills

Searches the live web with citations through perplexity-mcp v2 tools or a bundled Python REST client, with focused ask, deep research and detached tasks.

escapeWu/perplexity-ai

This skill should be used when a user wants to build a structured research query interactively before starting deep research.

fivetaku/insane-research

A skill your agent uses when turning a folder of research PDFs into Obsidian notes, even if Obsidian is not named.

Aperivue/medsci-skills

Maintains a project-scoped Obsidian research knowledge base: bootstrapping its folders, routing notes, updating hub, plan and index notes, and linting.

Galaxy-Dawn/claude-scholar

Plans, writes prompts for, renders and audits academic figures from repos, papers or notes, with an option to turn rendered text into editable PowerPoint.

Azhi-ss/academic-figure-skills