Repository
pcingola/SnpEff agent skills
- skills
- 2
- GitHub stars
- 313
GitHub description: “Genomic variant annotation and functional effect prediction”
- Stars
- 313 (85 forks)
- Licence
- Unknown
- Last push
- Mar 2026
- Created
- Jan 2014
Install all skills
npx skills add pcingola/SnpEffAdd --skill <name> for a single skill and -a <agent> to choose the agent (see the agent guides).
Skills in pcingola/SnpEff, ranked
Ranked by score. Sort bymost stars,trending,newest,recently updated
| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | 1.Snpeff Run SnpEff, a variant annotation and effect prediction tool for genomic variants. | pcingola/ | 313 | — | ~823 | Automated safety check: Notes | Unknown | 7 mo ago |
| 2 | 2.Snpsift Run SnpSift, a toolbox for filtering and manipulating annotated VCF files. | pcingola/ | 313 | — | ~851 | Automated safety check: Notes | Unknown | 7 mo ago |
Questions, answered from the data.
What is the best skill in pcingola/SnpEff?
Snpeff from pcingola/SnpEff ranks first of the 2 skills in pcingola/SnpEff listed here, with the highest score: its repository has 313 GitHub stars, its SKILL.md loads about 823 tokens and it has informational notes only in the automated safety check. Next come Snpsift.
Are the skills in pcingola/SnpEff official?
None yet. All 2 skills in pcingola/SnpEff listed here come from community repositories; a skill counts as official when the product's own GitHub organization publishes it.
How do I install all skills from pcingola/SnpEff?
Run npx skills add pcingola/SnpEff in your project: the open-source skills CLI installs the repository's skills into your coding agent's skills folder. To install a single skill, open its page here for the exact command.
How are these skills ranked?
By Skill Navigator score, which combines the GitHub stars of the skill's repository (shared across that repo's skills and discounted for large collections), how many other GitHub owners carry a copy of the skill, and automated SKILL.md quality checks, minus penalties for safety-check warnings and for each further skill from the same repository. Skills that fail the safety check are not listed.