GitHub organization
Agent skills by aipoch, page 4
Skills by aipoch, ranked
Ranked by score. Sort bymost stars,trending,newest,recently updated
| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 145 | 145.Sop Writer Write GCP-compliant standard operating procedures for laboratory, clinical, or research workflows; use when a reproducible SOP with roles, steps, and control points is required. | aipoch/ | 2k | — | ~2k | Automated safety check: Pass | MIT | 22 days ago |
| 146 | 146.Spreadsheet Ops Spreadsheet processing and analysis for CSV/Excel; trigger when users ask to merge/clean tabular data, run statistics, add/edit Excel formulas, apply formatting, generate charts, or force workbook… | aipoch/ | 2k | — | ~1.7k | Automated safety check: Pass | MIT | 22 days ago |
| 147 | A skill your agent uses when estimating immune infiltration from bulk RNA-seq expression matrices with ssGSEA/GSVA, comparing case versus control groups, and generating downstream immune-score… | aipoch/ | 2k | — | ~1.7k | Automated safety check: Pass | MIT | 22 days ago |
| 148 | Guided statistical analysis for test selection, assumption checks, power analysis, and APA-style reporting. | aipoch/ | 2k | — | ~2.8k | Automated safety check: Pass | MIT | 22 days ago |
| 149 | Determines the appropriate Risk of Bias assessment scale for a medical study based on its design (RCT, Cohort, etc.), using PubMed metadata lookup or text analysis. | aipoch/ | 2k | — | ~1.6k | Automated safety check: Pass | MIT | 22 days ago |
| 150 | A skill your agent uses when you need a standardized R CLI workflow to run two-class SVM-RFE feature ranking on an expression-like matrix, choose an informative feature count from cross-validated… | aipoch/ | 2k | — | ~1.8k | Automated safety check: Pass | MIT | 22 days ago |
| 151 | A skill your agent uses when analyzing transcription factor (TF) regulatory networks using Dorothea database. | aipoch/ | 2k | — | ~2.6k | Automated safety check: Pass | MIT | 22 days ago |
| 152 | A skill your agent uses when performing time-dependent ROC curve analysis for survival data with follow-up time, event status, and a numeric marker. | aipoch/ | 2k | — | ~1.5k | Automated safety check: Pass | MIT | 22 days ago |
| 153 | 153.Tone Adjuster A skill your agent uses when converting medical text between academic and patient-friendly tones, translating medical jargon for patients, adapting research papers for public audiences, or rewriting… | aipoch/ | 2k | — | ~2.3k | Automated safety check: Pass | MIT | 22 days ago |
| 154 | A skill your agent uses when performing sample-level dimensionality reduction and visualization on abundance or OTU-style matrices with a companion group file, generating UMAP and/or t-SNE… | aipoch/ | 2k | — | ~2.7k | Automated safety check: Pass | MIT | 22 days ago |
| 155 | 155.Uniprot Database Direct REST API access to UniProt for protein search, entry retrieval, and identifier mapping; use when you need programmatic UniProtKB queries or cross-database ID conversion. | aipoch/ | 2k | — | ~1.3k | Automated safety check: Pass | MIT | 22 days ago |
| 156 | A skill your agent uses when running prognostic survival analysis on a clinical cohort with time-to-event data to estimate univariate and multivariable Cox proportional hazards models, export result… | aipoch/ | 2k | — | ~2.7k | Automated safety check: Pass | MIT | 22 days ago |
| 157 | 157.Wgcna Analysis A skill your agent uses when building a weighted gene co-expression network from a bulk expression matrix and a sample group file, filtering variable genes by MAD, identifying co-expression modules… | aipoch/ | 2k | — | ~2.9k | Automated safety check: Pass | MIT | 22 days ago |
| 158 | 158.Xgboost Analysis A skill your agent uses when building XGBoost models on tabular data and returning feature importance ranking outputs. | aipoch/ | 2k | — | ~1.9k | Automated safety check: Pass | MIT | 22 days ago |
| 159 | A skill your agent uses when identifying collaboration opportunities across fields, finding experts in complementary disciplines, translating methodologies between scientific domains, or building… | aipoch/ | 2k | — | ~2.6k | Automated safety check: Pass | MIT | 22 days ago |
| 160 | A skill your agent uses when interpreting scientific graphs and charts, explaining data visualizations for research presentations, writing figure captions for publications, or analyzing trends in… | aipoch/ | 2k | — | ~3.4k | Automated safety check: Pass | MIT | 22 days ago |
| 161 | 161.Key Takeaways Extracts and summarizes key takeaways from documents, meeting notes, articles, and other text content. | aipoch/ | 2k | — | ~2.3k | Automated safety check: Pass | MIT | 22 days ago |
| 162 | Generates a PROSPERO-compliant Meta-analysis protocol based on Title and PICOS. | aipoch/ | 2k | — | ~1.5k | Automated safety check: Pass | MIT | 22 days ago |
| 163 | A skill your agent uses when finding open access journals, checking journal policies, or identifying predatory publishers. | aipoch/ | 2k | — | ~1.8k | Automated safety check: Pass | MIT | 22 days ago |
| 164 | 164.Patent Landscape A skill your agent uses when analyzing biotech patent landscapes, identifying white spaces in pharmaceutical IP, tracking competitor patents, or assessing freedom to operate for drug development. | aipoch/ | 2k | — | ~2.1k | Automated safety check: Pass | MIT | 22 days ago |
| 165 | Refines long medical academic texts into SCI-style unstructured Chinese and English abstracts; use when you need to condense drafts/reports/summaries into bilingual abstracts and generate… | aipoch/ | 2k | — | ~1.5k | Automated safety check: Pass | MIT | 22 days ago |
| 166 | Generate structured academic CVs from free-form Chinese/English text and export to Word (.docx). | aipoch/ | 2k | — | ~1.4k | Automated safety check: Pass | MIT | 22 days ago |
| 167 | 167.Adaptyv Cloud laboratory platform for automated protein testing and validation; use when you have designed protein sequences and need wet-lab experimental validation (e.g., binding, expression… | aipoch/ | 2k | — | ~3.1k | Automated safety check: Notes | MIT | 22 days ago |
| 168 | 168.Bibliography Classifies and organizes literature by theme, method, and conclusion; use when you need to batch-read a folder of PDF/MD/DOCX/TXT files and output a structured CSV for literature reviews and… | aipoch/ | 2k | — | ~1.6k | Automated safety check: Pass | MIT | 22 days ago |
| 169 | Bioinformatics literature analysis workflow extraction and customized plan design. | aipoch/ | 2k | — | ~2.6k | Automated safety check: Pass | MIT | 22 days ago |
| 170 | Generates structured biomedical outlines for review articles, discussion sections, and thesis proposals. | aipoch/ | 2k | — | ~1.5k | Automated safety check: Pass | MIT | 22 days ago |
| 171 | 171.Cellosaurus API Access Cellosaurus database for cell line information and release data. | aipoch/ | 2k | — | ~1.7k | Automated safety check: Pass | MIT | 22 days ago |
| 172 | 172.Chea API Access ChEA3 and Harmonizome ChEA data for transcription factor enrichment analysis and metadata retrieval. | aipoch/ | 2k | — | ~1.7k | Automated safety check: Pass | MIT | 22 days ago |
| 173 | A skill your agent uses when refactoring research code for publication, adding documentation to existing analysis scripts, creating reproducible computational workflows, or preparing code for… | aipoch/ | 2k | — | ~3.1k | Automated safety check: Pass | MIT | 22 days ago |
| 174 | Access CrossRef metadata for scholarly works; use when you need to resolve a DOI or search CrossRef to retrieve bibliographic details, citation/reference counts, or funder information for research… | aipoch/ | 2k | — | ~1.5k | Automated safety check: Pass | MIT | 22 days ago |
| 175 | 175.Deeptools NGS analysis toolkit. An agent skill from aipoch/medical-research-skills. | aipoch/ | 2k | — | ~3.6k | Automated safety check: Pass | MIT | 22 days ago |
| 176 | 176.Encode API Access the ENCODE Project REST API to search for and retrieve biological data (biosamples, experiments, etc.). | aipoch/ | 2k | — | ~1.4k | Automated safety check: Pass | MIT | 22 days ago |
| 177 | 177.Encori API Access ENCORI (StarBase) database for miRNA-target, RNA-RNA, and other regulatory data. | aipoch/ | 2k | — | ~2k | Automated safety check: Pass | MIT | 22 days ago |
| 178 | Compare experimental method details between two Zotero PDF papers, identify protocol differences (ratios, dosages, timing, conditions), search supporting literature to explain why they differ, and… | aipoch/ | 2k | — | ~3.3k | Automated safety check: Notes | MIT | 22 days ago |
| 179 | A skill your agent uses when analyzing FASTQC quality reports from sequencing data, identifying quality issues in NGS datasets, or troubleshooting sequencing problems. | aipoch/ | 2k | — | ~2.1k | Automated safety check: Pass | MIT | 22 days ago |
| 180 | 180.Gene Info Retrieves comprehensive gene information including PubMed publication counts, NCBI summaries, and Ensembl transcript data. | aipoch/ | 2k | — | ~2.3k | Automated safety check: Pass | MIT | 22 days ago |
| 181 | 181.Gokegg Analysis A skill your agent uses when performing GO and KEGG enrichment on a gene list from bulk RNA-seq or microarray studies, then generating a combined GO/KEGG dot chart. | aipoch/ | 2k | — | ~2.7k | Automated safety check: Pass | MIT | 22 days ago |
| 182 | 182.Gsea Run GSEA on a ranked gene list and produce the enrichment table, running-score table, and enrichment plots. | aipoch/ | 2k | — | ~2.2k | Automated safety check: Pass | MIT | 22 days ago |
| 183 | Recommend academic journals based on manuscript topic, abstract, and impact factor expectations. | aipoch/ | 2k | — | ~1.5k | Automated safety check: Pass | MIT | 22 days ago |
| 184 | Search and locate relevant content within a local knowledge base (files, indices, or PageIndex). | aipoch/ | 2k | — | ~1.6k | Automated safety check: Pass | MIT | 22 days ago |
| 185 | Converts LabArchives notebook data, entry metadata, and authorized ELN exports into manuscript-ready academic writing outputs such as Methods sections, data-availability statements, reproducibility… | aipoch/ | 2k | — | ~1.7k | Automated safety check: Pass | MIT | 22 days ago |
| 186 | Filter literature by publication year, journal, and predefined screening rules to produce inclusion/exclusion lists; use when conducting preliminary screening or systematic review screening to… | aipoch/ | 2k | — | ~2.3k | Automated safety check: Pass | MIT | 22 days ago |
| 187 | 187.Markitdown Convert files and Office documents into clean Markdown when you need LLM-friendly, token-efficient text (e.g., for summarization, search, RAG ingestion, or dataset preparation). | aipoch/ | 2k | — | ~1.3k | Automated safety check: Pass | MIT | 22 days ago |
| 188 | Generates a patient-friendly medical case report tweet from case images and disease name. | aipoch/ | 2k | — | ~2k | Automated safety check: Pass | MIT | 22 days ago |
| 189 | A multi-stage workflow for writing long-form medical reviews; used when the user needs to build an outline based on PubMed literature, write chapter by chapter, perform supplementary searches, and… | aipoch/ | 2k | — | ~2.7k | Automated safety check: Pass | MIT | 22 days ago |
| 190 | Vector database retrieval and evidence-based answering for medical research topics. | aipoch/ | 2k | — | ~2k | Automated safety check: Pass | MIT | 22 days ago |
| 191 | Extracts key meeting information in chronological order and outputs decisions and action items; use when you need meeting minutes, action tracking, or project sync notes from transcripts or raw notes. | aipoch/ | 2k | — | ~2.7k | Automated safety check: Pass | MIT | 22 days ago |
| 192 | Generates scientifically sound inclusion and exclusion criteria for Meta-Analysis based on a given title or keywords. | aipoch/ | 2k | — | ~1.9k | Automated safety check: Pass | MIT | 22 days ago |
