Academic Paper Writing Pipeline
Imbad0202/academic-research-skills
Runs a 12-agent pipeline that plans, drafts, cites, reviews and formats academic papers, with modes for revision, rebuttals, abstracts and citation checks.
Simulates a Nature-style referee assessment of a manuscript, producing three independent reviewer reports plus a synthesis, grounded in the supplied text.
$ npx skills add Yuan1z0825/nature-skills --skill nature-reviewer -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install Yuan1z0825/nature-skills nature-reviewer --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/Yuan1z0825/nature-skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/nature-reviewer .claude/skills/nature-reviewer && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "nature-reviewer" agent skill from https://github.com/Yuan1z0825/nature-skills/tree/main/skills/nature-reviewer into .claude/skills/nature-reviewer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "nature-reviewer", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/Yuan1z0825/nature-skills/tree/main/skills/nature-reviewerType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add Yuan1z0825/nature-skills --skill nature-reviewer -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install Yuan1z0825/nature-skills nature-reviewer --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/Yuan1z0825/nature-skills.git skills-src && mkdir -p .agents/skills && cp -r skills-src/skills/nature-reviewer .agents/skills/nature-reviewer && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "nature-reviewer" agent skill from https://github.com/Yuan1z0825/nature-skills/tree/main/skills/nature-reviewer into .agents/skills/nature-reviewer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "nature-reviewer", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add Yuan1z0825/nature-skills --skill nature-reviewer -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install Yuan1z0825/nature-skills nature-reviewer --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/Yuan1z0825/nature-skills.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/skills/nature-reviewer .cursor/skills/nature-reviewer && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "nature-reviewer" agent skill from https://github.com/Yuan1z0825/nature-skills/tree/main/skills/nature-reviewer into .cursor/skills/nature-reviewer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "nature-reviewer", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/Yuan1z0825/nature-skills.git --path skills/nature-reviewer--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add Yuan1z0825/nature-skills --skill nature-reviewer -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install Yuan1z0825/nature-skills nature-reviewer --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/Yuan1z0825/nature-skills.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/skills/nature-reviewer .gemini/skills/nature-reviewer && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "nature-reviewer" agent skill from https://github.com/Yuan1z0825/nature-skills/tree/main/skills/nature-reviewer into .gemini/skills/nature-reviewer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "nature-reviewer", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install Yuan1z0825/nature-skills nature-reviewerInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add Yuan1z0825/nature-skills --skill nature-reviewer -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/Yuan1z0825/nature-skills.git skills-src && mkdir -p .github/skills && cp -r skills-src/skills/nature-reviewer .github/skills/nature-reviewer && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "nature-reviewer" agent skill from https://github.com/Yuan1z0825/nature-skills/tree/main/skills/nature-reviewer into .github/skills/nature-reviewer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "nature-reviewer", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add Yuan1z0825/nature-skills --skill nature-reviewer -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install Yuan1z0825/nature-skills nature-reviewer --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/Yuan1z0825/nature-skills.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/skills/nature-reviewer .opencode/skills/nature-reviewer && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "nature-reviewer" agent skill from https://github.com/Yuan1z0825/nature-skills/tree/main/skills/nature-reviewer into .opencode/skills/nature-reviewer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "nature-reviewer", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
nature-reviewerSimulates a Nature-style referee assessment of a manuscript, producing three independent reviewer reports plus a synthesis, grounded in the supplied text.
The skill evaluates a manuscript on five source-grounded axes: originality, scientific importance, interdisciplinary readership, technical soundness and readability for nonspecialists, with a 12-axis taxonomy of technical concerns used only as an internal checklist. By default it returns three mutually blind reviewer reports and one post-review synthesis. Each reviewer gets the same manuscript packet, the same journal criteria and a preassigned emphasis, and must run in a separate context, subagent or invocation, or the output must say that blindness cannot be guaranteed.
Reports are frozen before they are compared, and natural disagreement is kept as evidence of independence. A separate forensic consistency audit then checks arithmetic, metric bounds, aggregation levels, duplicate displays, provenance and reproducibility without feeding back into the reviewers. Every substantive concern gets a stable ID, a claim pointer and an evidence pointer. It does not draft author rebuttals. The folder has 23 files, including reference notes and tests.
10 steps, taken from the first numbered list in SKILL.md.
Read from SKILL.md and the folder at commit e605b35. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
No scripts in the folder and no shell commands in SKILL.md.
From the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Nature-Style Mock Peer Review loads about 3.2k tokens when it runs, and up to ~19k if it reads all its reference files. Until then it costs about 54 tokens; SKILL.md has 1,378 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
The full file from Yuan1z0825/nature-skills at commit e605b35, republished under its Apache-2.0 licence (© Yuan1z0825). 1,378 words, ~3,224 tokens.
.claude/skills/nature-reviewer/SKILL.md (or your agent's skills folder). This skill also uses 20 other files; get the full folder from GitHub.Use this skill to simulate a Nature-style reviewer assessment package from the referee
side.
This skill is for reviewer-style manuscript evaluation, not for drafting the authors'
response. If the user wants rebuttal writing, route to nature-response.
originality, scientific importance, interdisciplinary readership, technical soundness, and readability for nonspecialists.3 mutually blind reviewer reports + 1 post-review synthesis unless the user explicitly asks for another structure.references/forensic-consistency-audit.md as a separate editorial pass. Audit arithmetic, metric bounds, aggregation levels, prose-table ordering, duplicate displays, dispersion anomalies, provenance and reproducibility. Never feed audit findings back into reviewer contexts or edit frozen reports after comparison.claim_pointer, and a verifiable evidence_pointer; mark missing locations instead of inventing them.Major Concerns and Minor Comments. Mark a Major Concern
Blocking Yes only when the current manuscript cannot establish its central case until that
concern is resolved; Minor Comments are never blocking.R1-M1. Preserve punctuation in source-faithful titles, quotations, formulas, identifiers, URLs, times, and required machine-readable syntax when changing it would be inaccurate.nature-reviewer structure.Nature.The skill may receive:
If the provided material is partial, perform a bounded review and mark the assessment boundary explicitly.
references/technical-concern-taxonomy.md. If relevant, load only the applicable section of references/domain-specific-review-gates.md inside that same isolated context.references/forensic-consistency-audit.md. Classify findings as confirmed internal error, aggregation ambiguity, provenance gap, suspected duplication, unresolved input needed, not assessable, or passed. Do not feed audit findings back into reviewer contexts or edit frozen reports after comparison.Cross-review synthesis (post-review; not shown to reviewers) with consensus blocking concerns, other major concerns, forensic consistency findings, the minor-revision checklist, and genuine differences in emphasis or judgment.Unless the user asks for another format, return:
Review setup
- **Input scope** [value]
- **Assessment boundary** [value]
- **Shared manuscript claim summary** [value]
- **Visible evidence base** [value]
- **Missing materials affecting confidence** [value]
Reviewer 1
- **Overall assessment** [text]
- **Who would be interested in the results, and why** [text]
- **Major strengths** [text]
- **Major Concerns** [items]
- **Minor Comments** [items]
- **Technical failings that need to be addressed before the case is established** [IDs or summary]
- **Assessment against Nature-style criteria** [text]
- **Recommendation posture** [text]
For each Major Concern
- **Concern ID** R1-M1
- **Severity** Major
- **Blocking** Yes / No
- **Axis** [value]
- **Claim pointer** [value]
- **Evidence pointer** [value]
- **Concern** [text]
- **Why it matters** [text]
- **Resolution test** [text]
For each Minor Comment
- **Concern ID** R1-m1
- **Severity** Minor
- **Axis** [value]
- **Affected element** [value]
- **Evidence pointer** [value]
- **Issue** [text]
- **Required correction** [text]
Reviewer 2
[Same structure]
Reviewer 3
[Same structure]
Cross-review synthesis (post-review; not shown to reviewers)
- **Consensus strengths** [text]
- **Consensus blocking concerns** [items]
- **Other consensus major concerns** [items]
- **Where emphasis differs across reviewers** [text]
- **Forensic consistency findings** [confirmed errors, aggregation ambiguities, provenance gaps, suspected duplication, unresolved author input]
- **Minor revision checklist** [items]
- **Broad-interest / significance readout** [text]
- **Most important issues to resolve before a strong Nature-style case is established** [items]
Risk / unsupported claims
- [specific unsupported or not-assessable items]Nature as a settled fact.| File | Open when |
|---|---|
| references/source-basis.md | You need source provenance, local rule summaries, or source-vs-implementation boundaries |
| references/reviewer-workflow.md | You need the invocation order, fact-base extraction flow, or synthesis rules |
| references/review-axes.md | You need the evaluation axes or reviewer weighting logic |
| references/technical-concern-taxonomy.md | You need the internal 12-axis coverage check, concern ledger, or claim/evidence-pointer rules |
| references/domain-specific-review-gates.md | The manuscript has clear chemistry, engineering, materials, atmospheric, climate-ecology, hydrology, or remote-sensing evidence chains |
| references/report-structure.md | You need the default output contract or section anatomy |
| references/role-boundaries.md | You need constraints on reviewer differences and editor-versus-reviewer boundaries |
| references/qa-checklist.md | You are finalizing an output and need groundedness / non-invention checks |
| references/forensic-consistency-audit.md | You need the mandatory post-review audit of arithmetic, metric bounds, aggregation level, prose-table consistency, provenance, dispersion anomalies, or reproducibility gates |
| ../nature-shared/core/consistency-sweep.md | You are checking the manuscript against itself: headline counts that do not reconcile with the Methods, one metric at two precisions, a superlative contradicted by the paper's own table, overlapping error bars presented as an advantage, or internal summaries that disagree |
| references/editorial criteria and processes.md | You need the primary local Nature source text |
Use sources in this order:
references/editorial criteria and processes.mdreferences/source-basis.mdreferences/domain-specific-review-gates.mdIf a user asks for policy-level certainty beyond this local source, state the limit instead of improvising broader journal policy.
© Yuan1z0825, Apache-2.0. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
SKILL.md and 20 other files (references) in skills/nature-reviewer of Yuan1z0825/nature-skills.
Open the folder on GitHubat commit e605b35
Nature-Style Mock Peer Review next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Nature-Style Mock Peer Review this skillYuan1z0825/nature-skills | 47k | — | ~3.2k | Automated safety check: Pass | Apache-2.0 | |
| Academic Paper Writing PipelineImbad0202/academic-research-skills | 51k | — | ~16k | Automated safety check: Pass | Custom licence | |
| Academic Paper ReviewerImbad0202/academic-research-skills | 51k | — | ~11k | Automated safety check: Pass | Custom licence | |
| Academic Research PipelineImbad0202/academic-research-skills | 51k | — | ~15k | Automated safety check: Pass | Custom licence | |
| Benchmark Paper TemplateHKUSTDial/Supervisor-Skills | 8.8k | — | ~2.8k | Automated safety check: Pass | CC-BY-4.0 | |
| Academic Research Suite for CodexImbad0202/academic-research-skills-codex | 12k | — | ~12k | Automated safety check: Pass | Custom licence |
Imbad0202/academic-research-skills
Runs a 12-agent pipeline that plans, drafts, cites, reviews and formats academic papers, with modes for revision, rebuttals, abstracts and citation checks.
Imbad0202/academic-research-skills
Simulates a journal peer review of a manuscript with a five-seat reviewer panel, an editorial synthesizer and several review modes.
Imbad0202/academic-research-skills
Orchestrates a ten-stage academic workflow from research to finished manuscript, including integrity checks, two rounds of peer review and revision.
HKUSTDial/Supervisor-Skills
Structures benchmark and evaluation papers around five pillars, with a completeness audit, an Introduction logic chain, a section skeleton and a pre-submission checklist.
Imbad0202/academic-research-skills-codex
A router skill that sends academic work such as literature reviews, drafting, citation checks, peer review and revision to the right workflow in the ARS suite.
HKUSTDial/Supervisor-Skills
Turns pasted peer-review comments into a per-concern rebuttal plan, with reviewer mindset matching and strategy priorities, but not the final rebuttal text.
Yuan1z0825/nature-skills
Builds a structured deep-reading card for one scientific paper, covering methods, how experiments support claims, limitations and research ideas, with a script to prepare the source.
Yuan1z0825/nature-skills
Creates, revises, audits and exports manuscript-ready scientific figures in Python or R, and routes AI-generated graphical abstracts to a separate workflow.
Yuan1z0825/nature-skills
Drafts Chinese invention patent applications and technical disclosures from research papers or inventor materials, tying each claim feature to source evidence.
Yuan1z0825/nature-skills
Composes, revises or audits research proposals and opening reports through an evidence-first state machine with argument maps, section contracts and dynamic expert reviewers.
Yuan1z0825/nature-skills
Routes literature requests to lawful full-text sources: open access, publisher APIs, CNKI and institutional browser access, with a supporting-information gate.
Yuan1z0825/nature-skills
Rebuilds slide images, screenshots, scanned PDFs or image-only PPTX files as PowerPoint with editable objects, using a local CLI with per-page manifests and QA.
Categories
Simulates a Nature-style referee assessment of a manuscript, producing three independent reviewer reports plus a synthesis, grounded in the supplied text. The skill evaluates a manuscript on five source-grounded axes: originality, scientific importance, interdisciplinary readership, technical soundness and readability for nonspecialists, with a 12-axis taxonomy of technical concerns used only as an internal checklist. By default it returns three mutually blind reviewer reports and one post-review synthesis.
Nature-Style Mock Peer Review fits situations like: self-reviewing a manuscript from the referee's side before submission; getting a structured list of major and minor concerns with evidence pointers; stress-testing a paper's claims against independent reviewer perspectives.
Run `npx skills add Yuan1z0825/nature-skills --skill nature-reviewer -a claude-code`. Or copy the skill folder (skills/nature-reviewer in Yuan1z0825/nature-skills) into .claude/skills/nature-reviewer in your project. Claude Code loads it when a task matches its description.
Run `npx skills add Yuan1z0825/nature-skills --skill nature-reviewer -a codex`. Or copy the skill folder (skills/nature-reviewer in Yuan1z0825/nature-skills) into .agents/skills/nature-reviewer in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add Yuan1z0825/nature-skills --skill nature-reviewer -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/nature-reviewer, .gemini/skills/nature-reviewer, .github/skills/nature-reviewer and .opencode/skills/nature-reviewer in your project.
SKILL.md names no scripts, command-line tools or credentials: Nature-Style Mock Peer Review is instructions for the agent only. Our summary lists: The manuscript or excerpt text supplied by you.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
Nature-Style Mock Peer Review is published under the Apache-2.0 licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
About 3.2k tokens (SKILL.md is roughly 13k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full. Its references folder adds about 16k tokens, read only when the agent opens those files.
Skills that share tags, products or a category with Nature-Style Mock Peer Review: Academic Paper Writing Pipeline (Imbad0202/academic-research-skills, 51k stars), Academic Paper Reviewer (Imbad0202/academic-research-skills, 51k stars), Academic Research Pipeline (Imbad0202/academic-research-skills, 51k stars) and Benchmark Paper Template (HKUSTDial/Supervisor-Skills, 8.8k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
Yuan1z0825 (a GitHub user) maintains it in Yuan1z0825/nature-skills, which has 47,222 GitHub stars. The repository holds 23 skills in this directory. The repository was last updated on October 11, 2026.
Source: Yuan1z0825/nature-skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.