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Model Context Protocol · For researchers
Skills
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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 145 | 145.Aer Statspai A skill your agent uses when aer-identification has fixed the design, after methodology choice and before aer-robustness or aer-tables-figures, to run an AER-track analysis with StatsPAI — the… | brycewang-stanford/ | 4.6k | — | ~3k | Automated safety check: Pass | Unknown | 6 days ago |
| 146 | 146.G1 VS-Enhanced Journal Matcher with Journal Intelligence MCP — Real-time journal data pipeline with checkpoint-based human decisions. | brycewang-stanford/ | 4.6k | — | ~3.7k | Automated safety check: Pass | Unknown | 6 days ago |
| 147 | Research Coordinator v12.0 - Human-Centered Edition (Systematic Review Automation) Context-persistent platform with 24 specialized agents across 9 categories (A-G, I, X). | brycewang-stanford/ | 4.6k | — | ~3.2k | Automated safety check: Pass | Unknown | 6 days ago |
| 148 | 148.Stata Setup Install, configure, update, or verify mcp-stata across Claude Code, Codex, Gemini CLI, Cursor, Windsurf, and VS Code. | brycewang-stanford/ | 4.6k | — | ~516 | Automated safety check: Pass | Unknown | 6 days ago |
| 149 | Search Google, Bing, Google News and Google Scholar, and read public pages, through the Serply MCP server. | davepoon/ | 3.6k | — | ~865 | Automated safety check: Pass | MIT | 2 days ago |
| 150 | Model Context Protocol (MCP) server for bioinformatics web services like GEO, STRING, and UCSC Cell Browser. | FreedomIntelligence/ | 3.1k | 1 repo | ~353 | Automated safety check: Pass | MIT | 2 mo ago |
| 151 | Find and synthesize research papers, whitepapers, PDFs, technical reports, and academic sources with Firecrawl Research, using semantic paper search, related-paper expansion, and in-body… | firecrawl/ | 117 | — | ~1.8k | Automated safety check: Pass | ISC | 3 days ago |
| 152 | Write comprehensive literature reviews for medical imaging AI research. | aipoch/ | 1.9k | — | ~1.2k | Automated safety check: Pass | MIT | 24 days ago |
| 153 | 153.Deep Research Deep research report generation for Reviva's built-in deep-researcher agent. | mingchen666/ | 244 | — | ~5.9k | Automated safety check: Pass | MIT | yesterday |
| 154 | 154.Lit Review Retrieves papers from local folder or ArXiv and Semantic Scholar using domain-aware keyword expansion, builds synthesis matrix, identifies gaps. | GRIND-Lab-Core/ | 106 | — | ~3.2k | Automated safety check: Pass | No licence | 5 mo ago |
| 155 | 155.Jacobian Math Use Jacobian's MCP operations for nontrivial mathematical computation, finite search, structural analysis, formal checking, probability, or optimization. | morluto/ | 220 | — | ~286 | Automated safety check: Pass | MIT | 6 days ago |
| 156 | Runs multi-source web research through the firecrawl and exa MCP tools and writes a cited report with source attribution. | affaan-m/ | 276k | — | ~150 | Automated safety check: Pass | MIT | yesterday |
| 157 | Deep research skill powered by NotebookLM MCP. An agent skill from davila7/claude-code-templates. | davila7/ | 33k | — | ~1.7k | Automated safety check: Pass | MIT | yesterday |
| 158 | 158.API Errors McpError constructor, JsonRpcErrorCode reference, and error handling patterns for @cyanheads/mcp-ts-core. | cyanheads/ | 158 | — | ~16k | Automated safety check: Pass | Apache-2.0 | 2 days ago |
| 159 | 159.Research Mastery Hierarchical retrieval: KB → MCP/Context7 → web. An agent skill from softspark/ai-toolkit. | softspark/ | 179 | — | ~1.8k | Automated safety check: Pass | Apache-2.0 | 3 days ago |
| 160 | 160.Chem Solution Md Set up and run molecular dynamics simulations of molecules in explicit solvent boxes using Packmol for box construction and MLIPs for dynamics. | learningmatter-mit/ | 176 | — | ~1.9k | Automated safety check: Pass | MIT | 4 days ago |
| 161 | 161.Drug Ligand Prep Prepare small-molecule ligands for docking and analysis via optional state enumeration, 3D conformer generation, MMFF/UFF minimization, and export to SDF + AutoDock PDBQT. | learningmatter-mit/ | 176 | — | ~772 | Automated safety check: Pass | MIT | 4 days ago |
| 162 | Prepare macromolecular receptor structures (PDB/mmCIF or RCSB PDB ID) for docking or simulation by fixing common structure issues and adding hydrogens. | learningmatter-mit/ | 176 | — | ~1.1k | Automated safety check: Pass | MIT | 4 days ago |
| 163 | 163.Mat DB Mp Query Materials Project database for crystal structures, computed properties, elastic/magnetic data, and structurally similar materials using the MP API. | learningmatter-mit/ | 176 | — | ~3k | Automated safety check: Pass | MIT | 4 days ago |
| 164 | Calculate charged defect formation energies and transition level diagrams using pymatgen-analysis-defects and atomate2 VASP workflows. | learningmatter-mit/ | 176 | — | ~1.6k | Automated safety check: Pass | MIT | 4 days ago |
| 165 | Generate random crystal structures for a given composition (AIRSS-style) and relax with MLIPs to find low-energy candidates. | learningmatter-mit/ | 176 | — | ~1.2k | Automated safety check: Pass | MIT | 4 days ago |
| 166 | 166.Stata Show mcp-stata identity, connected tools, and status. An agent skill from brycewang-stanford/Auto-Empirical-Research-Skills. | brycewang-stanford/ | 4.6k | — | ~519 | Automated safety check: Pass | Unknown | 6 days ago |
| 167 | 167.API Utils API reference for all utilities exported from @cyanheads/mcp-ts-core/utils. | cyanheads/ | 158 | — | ~9.1k | Automated safety check: Pass | Apache-2.0 | 2 days ago |
| 168 | 168.API Workers Cloudflare Workers deployment using createWorkerHandler from @cyanheads/mcp-ts-core/worker. | cyanheads/ | 158 | — | ~3.9k | Automated safety check: Pass | Apache-2.0 | 2 days ago |
| 169 | 169.Setup Arxiv MCP Guide for setup arXiv paper search MCP server using Docker MCP | NeoLabHQ/ | 1.8k | — | ~1k | Automated safety check: Pass | GPL-3.0 | 1 mo ago |
| 170 | 170.Novelty Check Validates that a research idea is genuinely novel vs. An agent skill from GRIND-Lab-Core/night_owl_research_agent. | GRIND-Lab-Core/ | 106 | — | ~1k | Automated safety check: Pass | No licence | 5 mo ago |
| 171 | Uses Brave MCP to search YouTube and find relevant videos on a topic. | hamzafarooq/ | 145 | — | ~508 | Automated safety check: Pass | MIT | 28 days ago |
| 172 | 172.Remember Write-side memory: stores decisions, patterns, and outcomes in the MCP memory knowledge graph as entities with typed observations and relations. | yonatangross/ | 292 | — | ~2.5k | Automated safety check: Notes | MIT | yesterday |
| 173 | Find the papers that answer a research query in Firecrawl's research paper index — a corpus of paper abstracts whose largest share is biomedical and life-science literature (PubMed, bioRxiv… | firecrawl/ | 117 | — | ~2.4k | Automated safety check: Pass | ISC | 3 days ago |
| 174 | Patsnap Scientific Literature & Journals MCP for AI agents. An agent skill from patsnap/mcp. | patsnap/ | 113 | — | ~673 | Automated safety check: Pass | Apache-2.0 | 1 mo ago |
| 175 | Patsnap Scientific & Translational Evidence MCP for AI agents. | patsnap/ | 113 | — | ~728 | Automated safety check: Pass | Apache-2.0 | 1 mo ago |
| 176 | Turn on Obsidian mode and migrate the vault to wiki links. An agent skill from davekilleen/Dex. | davekilleen/ | 494 | — | ~1.2k | Automated safety check: Pass | MIT | 2 days ago |
| 177 | AI toolkit to parse, complete, and format academic references | wentorai/ | 298 | 1 repo | ~1.1k | Automated safety check: Pass | MIT | 3 mo ago |
| 178 | 178.Zotero MCP Guide Guide to Zotero MCP for connecting Zotero library with AI assistants | wentorai/ | 298 | 1 repo | ~2.1k | Automated safety check: Pass | MIT | 3 mo ago |
| 179 | A skill your agent uses to retrieve official biomedical or healthcare public records, choose between ClinicalTrials.gov, PubMed, FDA and CMS sources, inspect data vintage and query completeness, or… | hh-health-AI/ | 101 | — | ~696 | Automated safety check: Pass | MIT | 3 days ago |
| 180 | A skill your agent uses when retrieving ClinicalTrials.gov, PubMed, openFDA or CMS catalog and sample data, integrating public biomedical tools through MCP or checking query completeness and vintage. | hh-health-AI/ | 101 | — | ~858 | Automated safety check: Pass | MIT | 3 days ago |
| 181 | 181.Research Brief Create an automation that writes a recurring research brief. | OpenHands/ | 163 | — | ~831 | Automated safety check: Pass | MIT | 2 days ago |
| 182 | Compose auditable protein-design operations through the configured OpenAI4S protein-design MCP connector: target-conditioned RFdiffusion backbone generation, constrained ProteinMPNN sequence design… | PKU-YuanGroup/ | 622 | — | ~2.3k | Automated safety check: Pass | MIT | 2 days ago |
| 183 | 183.API Config Reference for core and server configuration in @cyanheads/mcp-ts-core. | cyanheads/ | 158 | — | ~6.8k | Automated safety check: Notes | Apache-2.0 | 2 days ago |
| 184 | 184.API Context Canonical reference for the unified Context object passed to every tool and resource handler in @cyanheads/mcp-ts-core. | cyanheads/ | 158 | — | ~17k | Automated safety check: Pass | Apache-2.0 | 2 days ago |
| 185 | A skill your agent uses for OmicVerse bulk RNA-seq, enrichment/signature scoring, metabolomics, proteomics, microbiome, and statistical table workflows. | VectorSpaceLab/ | 331 | — | ~1k | Automated safety check: Pass | GPL-3.0 | 1 mo ago |
| 186 | 经济金融研究端到端完整流程。从研究想法到可投稿论文，覆盖文献综述、想法生成、新颖性验证、实证方法设计、论文大纲、正文写作、图表生成、LaTeX编译和投稿前检查。 | csmar432/ | 109 | — | ~5.1k | Automated safety check: Pass | MIT | 5 days ago |
| 187 | 187.Zotero Research A skill your agent uses when the user wants to search, browse, read, summarize, cite, annotate, or manage their Zotero library through Zotero MCP. | hashgraph-online/ | 1.3k | — | ~2.4k | Automated safety check: Pass | Apache-2.0 | yesterday |
| 188 | Use AI4Scholar for real scholarly literature tasks through MCP or the OpenClaw plugin: paper search, Google Scholar/Semantic Scholar/PubMed/arXiv/bioRxiv/medRxiv queries, PDF download and reading… | Drchronx/ | 139 | — | ~1.4k | Automated safety check: Pass | Unknown | 4 mo ago |
| 189 | Use AMiner MCP for academic knowledge graph tasks: scholar search, author profile lookup, institution or team analysis, paper and patent discovery, academic influence checks, and research trend… | Drchronx/ | 139 | — | ~1.1k | Automated safety check: Pass | Unknown | 4 mo ago |
| 190 | Compute RDKit physicochemical descriptors and rule-based drug-likeness heuristics (Ro5, Veber, QED) from SMILES. | learningmatter-mit/ | 176 | — | ~1.1k | Automated safety check: Pass | MIT | 4 days ago |
| 191 | Compute Morgan/ECFP fingerprints, Tanimoto similarity, and optional Butina clusters/heatmaps for small-molecule comparison. | learningmatter-mit/ | 176 | — | ~1k | Automated safety check: Pass | MIT | 4 days ago |
| 192 | Perform iterative, deep, and comprehensive literature research on a specific materials/chemistry topic. | learningmatter-mit/ | 176 | — | ~1.2k | Automated safety check: Pass | MIT | 4 days ago |
