Repository
cyanheads/pubmed-mcp-server agent skills
- skills
- 30
- GitHub stars
- 158
GitHub description: “Search PubMed/Europe PMC, fetch articles and full text (PMC/EPMC/Unpaywall), citations, MeSH terms via MCP. STDIO or Streamable HTTP.”
- Stars
- 158 (24 forks)
- Licence
- Apache-2.0
- Last push
- Oct 2026
- Created
- May 2025
- ai-agents
- ai-tools
- mcp
- mcp-server
- model-context-protocol
- ncbi
- pubmed
- pubmed-api
- biomedical
- citations
- e-utilities
- mesh
- typescript
- bioinformatics
- full-text
- open-access
Install all skills
npx skills add cyanheads/pubmed-mcp-serverAdd --skill <name> for a single skill and -a <agent> to choose the agent (see the agent guides).
Skills in cyanheads/pubmed-mcp-server, ranked
Ranked by score. Sort bymost stars,trending,newest,recently updated
| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | Scaffold an MCP App tool + UI resource pair. An agent skill from cyanheads/pubmed-mcp-server. | cyanheads/ | 158 | — | ~3.2k | Automated safety check: Pass | Apache-2.0 | today |
| 2 | Scaffold a new MCP prompt template. An agent skill from cyanheads/pubmed-mcp-server. | cyanheads/ | 158 | — | ~1.6k | Automated safety check: Pass | Apache-2.0 | today |
| 3 | Scaffold a new MCP resource definition. An agent skill from cyanheads/pubmed-mcp-server. | cyanheads/ | 158 | — | ~3k | Automated safety check: Pass | Apache-2.0 | today |
| 4 | Scaffold a new service integration. An agent skill from cyanheads/pubmed-mcp-server. | cyanheads/ | 158 | — | ~3.6k | Automated safety check: Pass | Apache-2.0 | today |
| 5 | 5.Add Test Scaffold a test file for an existing tool, resource, or service. | cyanheads/ | 158 | — | ~4.1k | Automated safety check: Pass | Apache-2.0 | today |
| 6 | 6.API Auth Authentication, authorization, and multi-tenancy patterns for @cyanheads/mcp-ts-core. | cyanheads/ | 158 | — | ~2.9k | Automated safety check: Pass | Apache-2.0 | today |
| 7 | Stand up a persistent, self-refreshing local mirror of a bulk upstream dataset with the MirrorService (@cyanheads/mcp-ts-core/mirror). | cyanheads/ | 158 | — | ~2.6k | Automated safety check: Pass | Apache-2.0 | today |
| 8 | File a bug or feature request against @cyanheads/mcp-ts-core when you hit a framework issue. | cyanheads/ | 158 | — | ~3.2k | Automated safety check: Pass | Apache-2.0 | today |
| 9 | File a bug or feature request against this MCP server's own repo. | cyanheads/ | 158 | — | ~3.3k | Automated safety check: Pass | Apache-2.0 | today |
| 10 | 10.Setup Post-init orientation for an MCP server built on @cyanheads/mcp-ts-core. | cyanheads/ | 158 | — | ~3.3k | Automated safety check: Notes | Apache-2.0 | today |
| 11 | 11.Techniques Catalog of reusable response- and data-shaping techniques for MCP servers built on @cyanheads/mcp-ts-core — overflow handling, payload shaping, retrieval patterns. | cyanheads/ | 158 | — | ~534 | Automated safety check: Pass | Apache-2.0 | today |
| 12 | 12.Add Tool Scaffold a new MCP tool definition. An agent skill from cyanheads/pubmed-mcp-server. | cyanheads/ | 158 | — | ~19k | Automated safety check: Pass | Apache-2.0 | today |
| 13 | 13.API Canvas DataCanvas primitive reference — a Tier 3 SQL/analytical workspace for tabular MCP servers, backed by DuckDB. | cyanheads/ | 158 | — | ~10k | Automated safety check: Notes | Apache-2.0 | today |
| 14 | 14.API Errors McpError constructor, JsonRpcErrorCode reference, and error handling patterns for @cyanheads/mcp-ts-core. | cyanheads/ | 158 | — | ~16k | Automated safety check: Pass | Apache-2.0 | today |
| 15 | 15.API Linter MCP definition linter rules reference. An agent skill from cyanheads/pubmed-mcp-server. | cyanheads/ | 158 | — | ~18k | Automated safety check: Notes | Apache-2.0 | today |
| 16 | Catalog of OpenTelemetry instrumentation built into framework @cyanheads/mcp-ts-core — spans, metrics, completion logs, env config, runtime caveats, custom instrumentation patterns, and cardinality… | cyanheads/ | 158 | — | ~10k | Automated safety check: Pass | Apache-2.0 | today |
| 17 | Design the tool surface, resources, and service layer for a new MCP server. | cyanheads/ | 158 | — | ~22k | Automated safety check: Pass | Apache-2.0 | today |
| 18 | 18.Field Test Exercise tools, resources, and prompts against a live HTTP server via MCP JSON-RPC over curl. | cyanheads/ | 158 | — | ~11k | Automated safety check: Pass | Apache-2.0 | today |
| 19 | Review an MCP server for common security gaps: LLM-facing surfaces as injection vector (tools, resources, prompts, descriptions), scope blast radius, destructive ops without consent, upstream auth… | cyanheads/ | 158 | — | ~6.4k | Automated safety check: Pass | Apache-2.0 | today |
| 20 | 20.API Utils API reference for all utilities exported from @cyanheads/mcp-ts-core/utils. | cyanheads/ | 158 | — | ~9.1k | Automated safety check: Pass | Apache-2.0 | today |
| 21 | 21.API Workers Cloudflare Workers deployment using createWorkerHandler from @cyanheads/mcp-ts-core/worker. | cyanheads/ | 158 | — | ~3.9k | Automated safety check: Pass | Apache-2.0 | today |
| 22 | Finalize documentation and project metadata for a ship-ready MCP server. | cyanheads/ | 158 | — | ~5.6k | Automated safety check: Pass | Apache-2.0 | today |
| 23 | Review pass on an open release PR (release/<version → main) — the step between git-wrapup and release-and-publish when a project releases in gated release PR mode. | cyanheads/ | 158 | — | ~4.4k | Automated safety check: Pass | Apache-2.0 | today |
| 24 | Read-only audit of MCP definition language across an existing surface — tools, resources, prompts, server instructions. | cyanheads/ | 158 | — | ~4.9k | Automated safety check: Pass | Apache-2.0 | today |
| 25 | 25.API Config Reference for core and server configuration in @cyanheads/mcp-ts-core. | cyanheads/ | 158 | — | ~6.8k | Automated safety check: Notes | Apache-2.0 | today |
| 26 | 26.API Context Canonical reference for the unified Context object passed to every tool and resource handler in @cyanheads/mcp-ts-core. | cyanheads/ | 158 | — | ~17k | Automated safety check: Pass | Apache-2.0 | today |
| 27 | 27.API Services API reference for built-in service providers (LLM, Speech, Graph). | cyanheads/ | 158 | — | ~251 | Automated safety check: Pass | Apache-2.0 | today |
| 28 | 28.API Testing Testing patterns for MCP tool/resource handlers using createMockContext and Vitest. | cyanheads/ | 158 | — | ~8.2k | Automated safety check: Pass | Apache-2.0 | today |
| 29 | 29.Git Wrapup Land working-tree changes as logical commits — the work grouped by concern, topped by a release commit (version bump, changelog, regenerated artifacts). | cyanheads/ | 158 | — | ~7.5k | Automated safety check: Pass | Apache-2.0 | today |
| 30 | 30.Maintenance Investigate, adopt, and verify dependency updates — with special handling for @cyanheads/mcp-ts-core. | cyanheads/ | 158 | — | ~5.9k | Automated safety check: Pass | Apache-2.0 | today |
Questions, answered from the data.
What is the best skill in cyanheads/pubmed-mcp-server?
Add App Tool from cyanheads/pubmed-mcp-server ranks first of the 30 skills in cyanheads/pubmed-mcp-server listed here, with the highest score: its repository has 158 GitHub stars, its SKILL.md loads about 3.2k tokens and it passes the automated safety check with no findings. Next come Add Prompt and Add Resource.
Are the skills in cyanheads/pubmed-mcp-server official?
None yet. All 30 skills in cyanheads/pubmed-mcp-server listed here come from community repositories; a skill counts as official when the product's own GitHub organization publishes it.
How do I install all skills from cyanheads/pubmed-mcp-server?
Run npx skills add cyanheads/pubmed-mcp-server in your project: the open-source skills CLI installs the repository's skills into your coding agent's skills folder. To install a single skill, open its page here for the exact command.
How are these skills ranked?
By Skill Navigator score, which combines the GitHub stars of the skill's repository (shared across that repo's skills and discounted for large collections), how many other GitHub owners carry a copy of the skill, and automated SKILL.md quality checks, minus penalties for safety-check warnings and for each further skill from the same repository. Skills that fail the safety check are not listed.