Agent skill

Soil Biology And Biochemistry

by brycewang-stanford in brycewang-stanford/Awesome-Journal-Skills

A skill your agent uses when targeting Soil Biology & Biochemistry or deciding whether a soil-science manuscript fits this venue.

MITAuto-check passed

Install Soil Biology And Biochemistry

skills CLI
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill soil-biology-and-biochemistry -a claude-code

Project install by default; add -g for ~/.claude/skills/.

GitHub CLI
$ gh skill install brycewang-stanford/Awesome-Journal-Skills soil-biology-and-biochemistry --agent claude-code

Project scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).

Manual copy
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/Agriculture-Environment-Journal-Skills/skills/soil-biology-and-biochemistry .claude/skills/soil-biology-and-biochemistry && rm -rf skills-src

Use ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.

Claude Code skills documentation · loads skills from .claude/skills/

Facts

Skill name
soil-biology-and-biochemistry
GitHub stars
1.2k
Token cost
~1.7k tokens
SKILL.md length
697 words
Files
1
Skills in repo
2,387
Repo updated
First seen
Licence
MIT

At a glance

A skill your agent uses when targeting Soil Biology & Biochemistry or deciding whether a soil-science manuscript fits this venue.

  • Targeting Soil Biology & Biochemistry
  • SKILL.md covers Journal positioning, When to trigger, Scope & topic fit and Method & evidence bar, plus 6 more sections
  • Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md
  • Deciding whether a soil-science manuscript fits this venue

What it does

Soil Biology And Biochemistry is an agent skill from brycewang-stanford/Awesome-Journal-Skills. Use when targeting Soil Biology & Biochemistry or deciding whether a soil-science manuscript fits this venue. Encodes the journal's fit, the soil-process-mechanism bar, evidence and data-reporting expectations, house style, official-submission re-check, and desk-reject heuristics.

Its SKILL.md is about 1.7k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.

The repository describes itself as: Journal-specific Claude Code/Codex skill packs covering mainstream journals — AER, QJE, Nature, Cell, 管理世界, 经济研究 & 200+ more — your fast track to getting published. | 覆盖主流期刊的… The licence is MIT.

When your agent uses it

  • Targeting Soil Biology & Biochemistry
  • Deciding whether a soil-science manuscript fits this venue

Example prompts

  • “/soil-biology-and-biochemistry”

What it can do on your machine

Read from SKILL.md and the folder at commit 932eb23. It shows what the files ask for, not the result of running them.

  • Tool permissions

    Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.

    From allowed-tools in the SKILL.md frontmatter.

  • Runs code

    No scripts in the folder and no shell commands in SKILL.md.

    From the folder's file list and the shell code blocks in SKILL.md.

  • Network

    No URLs in SKILL.md.

    From URLs in SKILL.md, links to its own repository left out.

  • Credentials

    Names no API keys, tokens, secrets or passwords.

    From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.

Context cost

Soil Biology And Biochemistry loads about 1.7k tokens when it runs. Until then it costs about 78 tokens; SKILL.md has 697 words of instructions outside code blocks.

Always · name and description, kept in context so the agent knows when to use it
~78
When it runs · the whole SKILL.md, loaded when a task matches
~1.7k

Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.

Safety

Auto-check passed

The automated check found no risky patterns in SKILL.md.

Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.

SKILL.md

The full file from brycewang-stanford/Awesome-Journal-Skills at commit 932eb23, republished under its MIT licence (© brycewang-stanford). 697 words, ~1,709 tokens.

Download SKILL.mdSave it as .claude/skills/soil-biology-and-biochemistry/SKILL.md (or your agent's skills folder).
name
soil-biology-and-biochemistry
description
Use when targeting Soil Biology & Biochemistry or deciding whether a soil-science manuscript fits this venue. Encodes the journal's fit, the soil-process-mechanism bar, evidence and data-reporting expectations, house style, official-submission re-check, and desk-reject heuristics.

Soil Biology & Biochemistry (soil-biology-and-biochemistry)

Journal positioning

Soil Biology & Biochemistry (SBB), published by Elsevier, is the leading journal for the mechanisms of soil biological and biochemical processes: soil organic matter dynamics, microbial ecology and function, nutrient cycling, soil carbon, extracellular enzymes, and the biogeochemical processes that soil biota drive. Its defining expectation is mechanistic process understanding — evidence about how soil organisms and reactions govern a process, not a descriptive inventory of what is present. A soil survey, a descriptive community census with no process link, or a management trial whose contribution is an agronomic outcome rather than a soil mechanism is a poor fit. This skill is a fit / venue-selection / re-framing tool. It does not replace the journal's current author guidelines. Before submitting, re-check the live SBB author guidance.

When to trigger

  • The author names SBB and wants a fit/framing check for a soil-process or soil-microbial paper.
  • A microbial-community or soil-carbon dataset must be re-framed around the process mechanism it explains rather than a description of community composition.
  • The author is choosing between SBB, agriculture-ecosystems-and-environment (agroecosystem environmental outcomes), and a broader biogeochemistry venue.
  • The author needs SBB's desk-reject heuristics and a credible alternative route.

Scope & topic fit

  • Soil organic matter formation, stabilization, and decomposition, and the controls on soil carbon persistence.
  • Soil microbial ecology and function: community assembly, activity, and the links between diversity and process rates.
  • Nutrient cycling and transformations (C, N, P, S) and the microbial/enzymatic mechanisms behind them.
  • Extracellular enzymes, microbial physiology, and carbon/nutrient-use efficiency as process drivers.
  • Soil fauna, the soil microbiome, and biotic interactions where they mechanistically shape soil processes.
  • Rhizosphere and root–soil–microbe interactions framed around process mechanism.

Method & evidence bar

  • The central claim must be a soil-process mechanism: evidence that links soil biota or reactions to a measured process rate or pool change, not co-occurrence or description.
  • Microbial-community data must be tied to function (rates, isotopes, enzyme activity, gene expression), not presented as composition alone; '-omics' needs process-level interpretation.
  • Incubation and field studies need adequate replication, appropriate controls, and statistics that respect spatial/temporal structure; isotope and tracer work needs proper mass balance.
  • Process rates and pools require validated methods, reported detection limits/uncertainty, and reproducible analytical protocols.
  • Sequence data must be deposited with accessions; data and code underpinning the process conclusions should be available per Elsevier policy.

Structure & house style

  • Standard IMRaD; the introduction must state the soil-process question and the mechanistic gap, not just the study site or community of interest.
  • Methods must document soil properties, sampling design, and analytical/incubation protocols in reproducible detail.
  • Figures should make the mechanism visible (rate–driver relationships, isotopic partitioning, enzyme/process links) with variability and controls shown.
  • A data-availability statement, sequence accessions, and complete soil metadata are expected; supplementary material carries analytical detail.
Show full SKILL.md (245 more words)Show less

Official-submission checklist

  • Before giving submission-ready advice, read ../../resources/source-basis.md and ../../resources/official-source-map.md; start from the official source anchors, then cite the current Soil Biology & Biochemistry page you checked.
  • Search the live site for "Soil Biology & Biochemistry guide for authors" and follow the current Elsevier version.
  • Re-check article types, structure, word/figure expectations, and abstract format.
  • Confirm sequence-data deposition/accession requirements and the data-availability policy.
  • Re-check competing-interests, funding, author-contribution, and AI-use disclosure, and open-access terms.
  • If the live official instructions conflict with this skill, the official instructions win.

Pre-submission self-check

  • The central contribution is a soil-process mechanism, not a descriptive inventory.
  • Microbial-community data are tied to function (rates, isotopes, enzymes, expression).
  • Replication, controls, and statistics respect spatial/temporal structure; mass balance holds.
  • Process rates/pools use validated methods with reported uncertainty and detection limits.
  • Sequence accessions and a data-availability statement are prepared.
  • Soil metadata and analytical protocols are documented for reproducibility.

Common desk-reject triggers

  • A descriptive soil survey or community census with no process mechanism.
  • Microbial composition reported with no link to a measured process or function.
  • '-omics' catalogues with no process-level interpretation or validation.
  • Under-replicated or pseudoreplicated incubations/field studies presented as general.
  • A management trial whose real contribution is an agronomic outcome, not a soil mechanism.

Re-routing decision

  • Agroecosystem environmental outcomes (GHG, nutrient losses, biodiversity) at field-landscape scale → agriculture-ecosystems-and-environment.
  • Crop yield/agronomy and resource-use efficiency is the core → field-crops-research.
  • Sustainability-framed soil/cropping-system synthesis or meta-analysis → agronomy-for-sustainable-development.
  • Large-scale climate/global-change soil-carbon process dominant → global-change-biology.
  • Broad, headline biogeochemistry significance → nature-communications or a global-biogeochemistry venue.

Output format

text
[Fit] High / Medium / Low (one-line reason)
[Target] Soil Biology & Biochemistry
[Topic tags] <2–3 closest soil-process topics>
[Process mechanism] <the soil biota/reaction → process-rate/pool link being established>
[Method/evidence] <does function-linkage + replication + method rigor clear SBB's bar?>
[Top risk] <the single most likely reason for rejection>
[Official items to re-check] <article type / sequence deposition / data policy / disclosures>
[Re-route suggestion] <if not a fit, a better-matched venue>

© brycewang-stanford, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file

Files

Just SKILL.md in Agriculture-Environment-Journal-Skills/skills/soil-biology-and-biochemistry of brycewang-stanford/Awesome-Journal-Skills.

Open the folder on GitHubat commit 932eb23

Compare with similar skills

Soil Biology And Biochemistry next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.

Soil Biology And Biochemistry compared with similar skills
SkillStarsUsed inTokensAuto-checkLicenceRepo updated
Soil Biology And Biochemistry this skillbrycewang-stanford/Awesome-Journal-Skills1.2k—~1.7kAutomated safety check: PassMIT
Touch Targetsthedaviddias/Front-End-Checklist74k—~938Automated safety check: PassMIT
Implementing Mimecast Targeted Attack Protectionmukul975/Anthropic-Cybersecurity-Skills34k—~1.8kAutomated safety check: PassApache-2.0
Target Journalbrycewang-stanford/Auto-Empirical-Research-Skills4.6k—~1.1kAutomated safety check: PassCustom licence
Target Novelty Scoreraipoch/medical-research-skills1.9k—~2.3kAutomated safety check: PassMIT
Workflow Score To TargetMengTo/Skills6.7k—~1.3kAutomated safety check: PassMIT

Similar skills

  • Touch Targets

    thedaviddias/Front-End-Checklist

    A skill your agent uses when applies to all interactive elements on touchscreen interfaces: buttons, links, checkboxes, radio buttons, form inputs, icon buttons, and menu items.

    74k GitHub stars~938 tokensUpdated 4 days ago
    MobileAuto-check passed
  • Implementing Mimecast Targeted Attack Protection

    mukul975/Anthropic-Cybersecurity-Skills

    Deploys and configures Mimecast Targeted Threat Protection (TTP) modules -- URL Protect (click-time URL rewriting/analysis), Attachment Protect (sandbox detonation), Impersonation Protect…

    34k GitHub stars~1.8k tokensUpdated 1 mo ago
    Documents & OfficeAuto-check passed
  • Target Journal

    brycewang-stanford/Auto-Empirical-Research-Skills

    Journal targeting analysis for the sewage-house-prices paper.

    4.6k GitHub stars~1.1k tokensUpdated 5 days ago
    Research & ScienceAuto-check passed
  • Target Novelty Scorer

    aipoch/medical-research-skills

    Score the novelty of biological targets through literature mining and.

    1.9k GitHub stars~2.3k tokensUpdated 24 days ago
    Research & ScienceAuto-check passed
  • Score work out of 10 against a clear rubric, then improve it round by round until every item reaches the target score the user named (for example "get it to 8 out of 10", "bring everything under 6…

    6.7k GitHub stars~1.3k tokensUpdated 4 days ago
    EducationAuto-check passed
  • Open Targets DB

    aipoch/medical-research-skills

    Query the Open Targets Platform to retrieve targets, diseases, or evidence records when you need target-disease association data and evidence-based scores for therapeutic discovery.

    1.9k GitHub stars~1.6k tokensUpdated 24 days ago
    Research & ScienceAuto-check passed

More from brycewang-stanford/Awesome-Journal-Skills

All 2,387 skills in this repo
  • Aaag Data Analysis

    brycewang-stanford/Awesome-Journal-Skills

    A skill your agent uses when running and reporting the analysis for an Annals of the American Association of Geographers manuscript — spatial statistics and modeling, remote-sensing accuracy, or…

    1.2k GitHub stars~1.3k tokensUpdated 14 days ago
    Auto-check passed
  • Aaag Literature Positioning

    brycewang-stanford/Awesome-Journal-Skills

    A skill your agent uses when positioning an Annals of the American Association of Geographers manuscript in the literature — engaging geographic scholarship across the relevant area and the…

    1.2k GitHub stars~1.3k tokensUpdated 14 days ago
    Auto-check passed
  • Aaag Rebuttal

    brycewang-stanford/Awesome-Journal-Skills

    A skill your agent uses when responding to an Annals of the American Association of Geographers decision letter (major/minor revision) — building a point-by-point response to the subject editor and…

    1.2k GitHub stars~1.4k tokensUpdated 14 days ago
    Auto-check passed
  • Aaag Research Design

    brycewang-stanford/Awesome-Journal-Skills

    A skill your agent uses when defending the research design of an Annals of the American Association of Geographers manuscript — spatial/quantitative analysis and GIScience, remote-sensing and…

    1.2k GitHub stars~1.4k tokensUpdated 14 days ago
    Auto-check passed
  • Aaag Review Process

    brycewang-stanford/Awesome-Journal-Skills

    A skill your agent uses when you need to understand how the Annals of the American Association of Geographers evaluates a manuscript — double-anonymous review routed through a subject editor by…

    1.2k GitHub stars~1.3k tokensUpdated 14 days ago
    Auto-check passed
  • Aaag Submission

    brycewang-stanford/Awesome-Journal-Skills

    A skill your agent uses when running the final pre-submission preflight for the Annals of the American Association of Geographers via ScholarOne Manuscripts — area/article-type selection…

    1.2k GitHub stars~1.6k tokensUpdated 14 days ago
    Auto-check passed

Questions about Soil Biology And Biochemistry

What does Soil Biology And Biochemistry do?

A skill your agent uses when targeting Soil Biology & Biochemistry or deciding whether a soil-science manuscript fits this venue. Soil Biology And Biochemistry is an agent skill from brycewang-stanford/Awesome-Journal-Skills. Use when targeting Soil Biology & Biochemistry or deciding whether a soil-science manuscript fits this venue.

When should I use Soil Biology And Biochemistry?

Soil Biology And Biochemistry fits situations like: targeting Soil Biology & Biochemistry; deciding whether a soil-science manuscript fits this venue.

How do I install Soil Biology And Biochemistry in Claude Code?

Run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill soil-biology-and-biochemistry -a claude-code`. Or copy the skill folder (Agriculture-Environment-Journal-Skills/skills/soil-biology-and-biochemistry in brycewang-stanford/Awesome-Journal-Skills) into .claude/skills/soil-biology-and-biochemistry in your project. Claude Code loads it when a task matches its description.

How do I install Soil Biology And Biochemistry in Codex?

Run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill soil-biology-and-biochemistry -a codex`. Or copy the skill folder (Agriculture-Environment-Journal-Skills/skills/soil-biology-and-biochemistry in brycewang-stanford/Awesome-Journal-Skills) into .agents/skills/soil-biology-and-biochemistry in your project. Codex loads it when a task matches its description.

Can I use Soil Biology And Biochemistry in Cursor, Gemini CLI or GitHub Copilot?

Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill soil-biology-and-biochemistry -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/soil-biology-and-biochemistry, .gemini/skills/soil-biology-and-biochemistry, .github/skills/soil-biology-and-biochemistry and .opencode/skills/soil-biology-and-biochemistry in your project.

What does Soil Biology And Biochemistry need to run?

SKILL.md names no scripts, command-line tools or credentials: Soil Biology And Biochemistry is instructions for the agent only.

Does Soil Biology And Biochemistry access the network?

SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.

Is Soil Biology And Biochemistry safe to install?

Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.

What licence does Soil Biology And Biochemistry use?

Soil Biology And Biochemistry is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.

How many tokens does Soil Biology And Biochemistry use?

About 1.7k tokens (SKILL.md is roughly 6.8k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.

What are the alternatives to Soil Biology And Biochemistry?

Skills that share tags, products or a category with Soil Biology And Biochemistry: Touch Targets (thedaviddias/Front-End-Checklist, 74k stars), Implementing Mimecast Targeted Attack Protection (mukul975/Anthropic-Cybersecurity-Skills, 34k stars), Target Journal (brycewang-stanford/Auto-Empirical-Research-Skills, 4.6k stars) and Target Novelty Scorer (aipoch/medical-research-skills, 1.9k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.

Who maintains Soil Biology And Biochemistry?

brycewang-stanford (a GitHub user) maintains it in brycewang-stanford/Awesome-Journal-Skills, which has 1,231 GitHub stars. The repository holds 2,387 skills in this directory. The repository was last updated on September 27, 2026.

Source: brycewang-stanford/Awesome-Journal-Skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.