A skill your agent uses to convert references to the current Cell Press numbered style used by Molecular Cell — superscript numbers in order of first appearance, a reference list numbered in that…

MITAuto-check passedResearch & Science

Install Molcell Citation

skills CLI
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill molcell-citation -a claude-code

Project install by default; add -g for ~/.claude/skills/.

GitHub CLI
$ gh skill install brycewang-stanford/Awesome-Journal-Skills molcell-citation --agent claude-code

Project scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).

Manual copy
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/Molecular-Cell-Skills/skills/molcell-citation .claude/skills/molcell-citation && rm -rf skills-src

Use ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.

Claude Code skills documentation · loads skills from .claude/skills/

Facts

Skill name
molcell-citation
GitHub stars
1.2k
Token cost
~1.6k tokens
SKILL.md length
756 words
Files
1
Skills in repo
2,387
Repo updated
First seen
Licence
MIT

At a glance

A skill your agent uses to convert references to the current Cell Press numbered style used by Molecular Cell — superscript numbers in order of first appearance, a reference list numbered in that…

  • Convert references to the current Cell Press numbered style used by Molecular Cell — superscript numbers in order of first appearance
  • SKILL.md covers When to trigger, Cell Press numbered citation…, Reference formats (shape —… and Common conversion fixes…, plus 5 more sections
  • Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md
  • A reference list numbered in that order

What it does

Molcell Citation is an agent skill from brycewang-stanford/Awesome-Journal-Skills. Use to convert references to the current Cell Press numbered style used by Molecular Cell — superscript numbers in order of first appearance, a reference list numbered in that order, full author lists (no et al.), abbreviated journal names. This is NOT author-date; older Cell Press author-date manuscripts must be renumbered.

Its SKILL.md is about 1.6k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.

It sits in Research & Science, covering Citation management. The repository describes itself as: Journal-specific Claude Code/Codex skill packs covering mainstream journals — AER, QJE, Nature, Cell, 管理世界, 经济研究 & 200+ more — your fast track to getting published. | 覆盖主流期刊的… The licence is MIT.

When your agent uses it

  • Convert references to the current Cell Press numbered style used by Molecular Cell — superscript numbers in order of first appearance
  • A reference list numbered in that order
  • Full author lists (no et al.)
  • Abbreviated journal names

Example prompts

  • “/molcell-citation”

What it can do on your machine

Read from SKILL.md and the folder at commit 932eb23. It shows what the files ask for, not the result of running them.

  • Tool permissions

    Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.

    From allowed-tools in the SKILL.md frontmatter.

  • Runs code

    No scripts in the folder and no shell commands in SKILL.md.

    From the folder's file list and the shell code blocks in SKILL.md.

  • Network

    No URLs in SKILL.md.

    From URLs in SKILL.md, links to its own repository left out.

  • Credentials

    Names no API keys, tokens, secrets or passwords.

    From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.

Context cost

Molcell Citation loads about 1.6k tokens when it runs. Until then it costs about 86 tokens; SKILL.md has 756 words of instructions outside code blocks.

Always · name and description, kept in context so the agent knows when to use it
~86
When it runs · the whole SKILL.md, loaded when a task matches
~1.6k

Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.

Safety

Auto-check passed

The automated check found no risky patterns in SKILL.md.

Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.

SKILL.md

The full file from brycewang-stanford/Awesome-Journal-Skills at commit 932eb23, republished under its MIT licence (© brycewang-stanford). 756 words, ~1,578 tokens.

Download SKILL.mdSave it as .claude/skills/molcell-citation/SKILL.md (or your agent's skills folder).
name
molcell-citation
description
Use to convert references to the current Cell Press numbered style used by Molecular Cell — superscript numbers in order of first appearance, a reference list numbered in that order, full author lists (no et al.), abbreviated journal names. This is NOT author-date; older Cell Press author-date manuscripts must be renumbered.

Reference Style (molcell-citation)

When to trigger

  • References are author–date "(Smith et al., 2021)" and must become Cell Press numbered.
  • The reference list is alphabetical instead of ordered by first appearance.
  • Author lists are truncated with "et al." in the bibliography.
  • You are porting a manuscript from a name–year journal (or an older Cell Press template) to Molecular Cell.

Cell Press numbered citation mechanics (current)

Cell Press moved its journals — including Molecular Cell — to a numbered referencing style. Confirm the live format, but the working model is:

  • In-text: superscript numbers, assigned in order of first appearance (e.g., "…unwinds DNA.^1,2" and later "…as shown previously.^1").
  • Reference list: numbered in citation order — NOT alphabetical, NOT author–date.
  • Full author lists in each entry (Cell Press does not truncate to "et al." for typical author counts; confirm the cutoff).
  • Abbreviated journal names, with year in parentheses, volume, and pages/article number.
  • A single reference list covering the main text and STAR Methods.
  • Reuse the same number on every later citation of a source; never assign a source two numbers.

This is the opposite of the old Cell Press author–date convention and of journals like Genetics that stay name–year. Porting in from an author–date manuscript is a mechanical but error-prone renumbering — do it in one pass so the in-text superscripts and the list stay in sync.

Reference formats (shape — confirm against the live Cell Press style)

  • Journal article: Author, A.B., Author, C.D., and Author, E.F. (2021). Title of the article. Abbrev. Journal Name 152, 1173–1183.
  • Book: Author, A.B. (2020). Book Title, edition (Publisher).
  • Chapter: Author, A.B. (2020). Chapter title. In Book Title, C.D. Editor, ed. (Publisher), pp. xx–yy.
  • Dataset/structure/code: cite with repository, accession/DOI, and year (consistent with molcell-data).
  • Preprint: include the server (e.g., bioRxiv) and DOI.

Surname precedes initials; "and" before the final author; year in parentheses after the author list. The entry is preceded by its number in the list.

Common conversion fixes (author–date → Cell Press numbered)

From (author–date)To (Cell Press numbered)
"(Smith et al., 2021)" in textsuperscript "^12" in order of appearance
List alphabetical by first authorlist numbered by order of first appearance
Same source cited twice with two tagsone number, reused at every citation
Truncated "et al." in the bibliofull author list
Separate STAR Methods bibliographyone merged, continuously numbered list
Narrative "Smith et al. (2021) showed""Smith et al.^12 showed" (name in text, number superscript)
Show full SKILL.md (359 more words)Show less

Worked conversion (author–date → Cell Press numbered)

An author–date sentence and its list entry:

Loss of XYZ slows fork progression (Smith et al., 2021). Smith, A.B., Lee, C.D., and Wong, E.F. (2021). Title. Mol. Cell 81, 233–247.

Converted to the current Cell Press numbered style, the in-text token becomes a superscript number set by where the source first appears, and the entry keeps full authors but is placed at that number in the citation-ordered list:

Loss of XYZ slows fork progression.^7 7. Smith, A.B., Lee, C.D., and Wong, E.F. (2021). Title. Mol. Cell 81, 233–247.

Mechanical traps: the number is fixed the first time the source appears and reused thereafter (do not renumber on later mentions); a source deleted from the text must be removed and everything after it renumbered; and a narrative citation keeps the author name in the sentence but still carries the superscript number.

STAR Methods and the single list

Molecular Cell uses one continuously numbered reference list for the whole paper, including citations that appear only in STAR Methods (protocols, algorithms, prior reagents). Do not build a separate methods bibliography. When porting from a journal that footnotes methods, sweep the STAR Methods text for citations and confirm each has a number in the single list. Software and datasets cited in the Key Resources Table follow molcell-data conventions (repository, accession/DOI, version) rather than the journal-article shape.

Tooling

  • Use Zotero/EndNote with the current Molecular Cell / Cell Press CSL/style (numbered, citation-order); do a final manual pass on author-list completeness and journal-abbreviation form.
  • After any text edit that adds or removes a citation, re-run the citation manager so numbers re-sequence — hand-numbering drifts fast.
  • Verify every superscript resolves to exactly one list entry and that no list entry is uncited.

Output format

【Style detected】 author–date / alphabetical / other → Cell Press numbered
【In-text】 superscript numbers in order of appearance? yes/no
【List order】 numbered by first appearance (not alphabetical)? yes/no
【Author lists】 full (not et al.)? surname-first? journal abbreviated? yes/no
【Reuse】 each source one number, reused on later cites? yes/no
【Unresolved / uncited】 [...]
【Next】 molcell-submission

Anti-patterns

  • Do not leave author–date "(Smith et al., 2021)" tokens in a Molecular Cell manuscript.
  • Do not order the reference list alphabetically — Cell Press numbered is by appearance.
  • Do not give one source two different numbers.
  • Do not truncate author lists with "et al." in the bibliography.

Cell Press reference formatting evolves — confirm the exact numbered format, author-list cutoff, and journal-abbreviation style against the current Molecular Cell information-for-authors page.

© brycewang-stanford, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file

Files

Just SKILL.md in Molecular-Cell-Skills/skills/molcell-citation of brycewang-stanford/Awesome-Journal-Skills.

Open the folder on GitHubat commit 932eb23

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Openalex Databaseneflibata-feng/MyArxiv-Agent12612 repos~3kAutomated safety check: PassCustom licence

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Questions about Molcell Citation

What does Molcell Citation do?

A skill your agent uses to convert references to the current Cell Press numbered style used by Molecular Cell — superscript numbers in order of first appearance, a reference list numbered in that…. Molcell Citation is an agent skill from brycewang-stanford/Awesome-Journal-Skills.), abbreviated journal names.

When should I use Molcell Citation?

Molcell Citation fits situations like: convert references to the current Cell Press numbered style used by Molecular Cell — superscript numbers in order of first appearance; A reference list numbered in that order; full author lists (no et al.); abbreviated journal names.

How do I install Molcell Citation in Claude Code?

Run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill molcell-citation -a claude-code`. Or copy the skill folder (Molecular-Cell-Skills/skills/molcell-citation in brycewang-stanford/Awesome-Journal-Skills) into .claude/skills/molcell-citation in your project. Claude Code loads it when a task matches its description.

How do I install Molcell Citation in Codex?

Run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill molcell-citation -a codex`. Or copy the skill folder (Molecular-Cell-Skills/skills/molcell-citation in brycewang-stanford/Awesome-Journal-Skills) into .agents/skills/molcell-citation in your project. Codex loads it when a task matches its description.

Can I use Molcell Citation in Cursor, Gemini CLI or GitHub Copilot?

Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill molcell-citation -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/molcell-citation, .gemini/skills/molcell-citation, .github/skills/molcell-citation and .opencode/skills/molcell-citation in your project.

What does Molcell Citation need to run?

SKILL.md names no scripts, command-line tools or credentials: Molcell Citation is instructions for the agent only.

Does Molcell Citation access the network?

SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.

Is Molcell Citation safe to install?

Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.

What licence does Molcell Citation use?

Molcell Citation is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.

How many tokens does Molcell Citation use?

About 1.6k tokens (SKILL.md is roughly 6.3k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.

What are the alternatives to Molcell Citation?

Skills that share tags, products or a category with Molcell Citation: Content Research Writer (weapp-tailwindcss/weapp-tailwindcss, 1.9k stars), Systematic Review Screener (Imbad0202/academic-research-skills, 51k stars), Networkx (zLanqing/codex-claude-academic-skills, 4.7k stars) and Literature Review (neflibata-feng/MyArxiv-Agent, 126 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.

Who maintains Molcell Citation?

brycewang-stanford (a GitHub user) maintains it in brycewang-stanford/Awesome-Journal-Skills, which has 1,231 GitHub stars. The repository holds 2,387 skills in this directory. The repository was last updated on September 27, 2026.

Source: brycewang-stanford/Awesome-Journal-Skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.