GitHub Deep Research
bytedance/deer-flow
Researches a GitHub repository over four rounds using the GitHub API and web search, then writes a structured markdown report with timeline, metrics and Mermaid diagrams.
A skill your agent uses when starting or navigating any Journal of Applied Psychology (JAP) manuscript and you are unsure which sub-skill applies.
Install Joap Workflow
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill joap-workflow -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills joap-workflow --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/Journal-of-Applied-Psychology-Skills/skills/joap-workflow .claude/skills/joap-workflow && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "joap-workflow" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Journal-of-Applied-Psychology-Skills/skills/joap-workflow into .claude/skills/joap-workflow/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "joap-workflow", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Journal-of-Applied-Psychology-Skills/skills/joap-workflowType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill joap-workflow -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills joap-workflow --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .agents/skills && cp -r skills-src/Journal-of-Applied-Psychology-Skills/skills/joap-workflow .agents/skills/joap-workflow && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "joap-workflow" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Journal-of-Applied-Psychology-Skills/skills/joap-workflow into .agents/skills/joap-workflow/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "joap-workflow", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill joap-workflow -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills joap-workflow --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/Journal-of-Applied-Psychology-Skills/skills/joap-workflow .cursor/skills/joap-workflow && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "joap-workflow" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Journal-of-Applied-Psychology-Skills/skills/joap-workflow into .cursor/skills/joap-workflow/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "joap-workflow", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/brycewang-stanford/Awesome-Journal-Skills.git --path Journal-of-Applied-Psychology-Skills/skills/joap-workflow--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill joap-workflow -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills joap-workflow --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/Journal-of-Applied-Psychology-Skills/skills/joap-workflow .gemini/skills/joap-workflow && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "joap-workflow" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Journal-of-Applied-Psychology-Skills/skills/joap-workflow into .gemini/skills/joap-workflow/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "joap-workflow", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills joap-workflowInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill joap-workflow -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .github/skills && cp -r skills-src/Journal-of-Applied-Psychology-Skills/skills/joap-workflow .github/skills/joap-workflow && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "joap-workflow" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Journal-of-Applied-Psychology-Skills/skills/joap-workflow into .github/skills/joap-workflow/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "joap-workflow", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill joap-workflow -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills joap-workflow --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/Journal-of-Applied-Psychology-Skills/skills/joap-workflow .opencode/skills/joap-workflow && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "joap-workflow" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Journal-of-Applied-Psychology-Skills/skills/joap-workflow into .opencode/skills/joap-workflow/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "joap-workflow", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
Facts
- Skill name
joap-workflow- GitHub stars
- 1.2k
- Token cost
- ~1.7k tokens
- SKILL.md length
- 528 words
- Files
- 1
- Skills in repo
- 2,387
- Repo updated
- First seen
- Licence
- MIT
At a glance
A skill your agent uses when starting or navigating any Journal of Applied Psychology (JAP) manuscript and you are unsure which sub-skill applies.
- Navigating any Journal of Applied Psychology (JAP) manuscript and you are unsure which sub-skill applies
- SKILL.md covers When to trigger, First question: article type, Routing map (stage → skill) and Default order, plus 6 more sections
- Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md
- Choosing among article types
What it does
Joap Workflow is an agent skill from brycewang-stanford/Awesome-Journal-Skills. Use when starting or navigating any Journal of Applied Psychology (JAP) manuscript and you are unsure which sub-skill applies. Use when choosing among article types or returning with a decision letter. Routes by lifecycle stage and article type (Feature Article, Research Report, theory-development article, integrative review, qualitative, meta-analysis), and flags JAP's twin gates — a real I-O theoretical contribution and measurement/design rigor. It dispatches; it does not draft content.
Its SKILL.md is about 1.7k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
It sits in Research & Science, covering Deep research. The repository describes itself as: Journal-specific Claude Code/Codex skill packs covering mainstream journals — AER, QJE, Nature, Cell, 管理世界, 经济研究 & 200+ more — your fast track to getting published. ｜ 覆盖主流期刊的… The licence is MIT.
When your agent uses it
- Navigating any Journal of Applied Psychology (JAP) manuscript and you are unsure which sub-skill applies
- Choosing among article types
- Returning with a decision letter
Example prompts
- “/joap-workflow”
What it can do on your machine
Read from SKILL.md and the folder at commit 932eb23. It shows what the files ask for, not the result of running them.
Tool permissions
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Runs code
No scripts in the folder and no shell commands in SKILL.md.
From the folder's file list and the shell code blocks in SKILL.md.
Network
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Credentials
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Context cost
Joap Workflow loads about 1.7k tokens when it runs. Until then it costs about 127 tokens; SKILL.md has 528 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
Safety
Auto-check passed
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
SKILL.md
The full file from brycewang-stanford/Awesome-Journal-Skills at commit 932eb23, republished under its MIT licence (© brycewang-stanford). 528 words, ~1,731 tokens.
Download SKILL.mdSave it as
.claude/skills/joap-workflow/SKILL.md (or your agent's skills folder).- name
- joap-workflow
- description
- Use when starting or navigating any Journal of Applied Psychology (JAP) manuscript and you are unsure which sub-skill applies. Use when choosing among article types or returning with a decision letter. Routes by lifecycle stage and article type (Feature Article, Research Report, theory-development article, integrative review, qualitative, meta-analysis), and flags JAP's twin gates — a real I-O theoretical contribution and measurement/design rigor. It dispatches; it does not draft content.
Journal of Applied Psychology Workflow Router (joap-workflow)
The orchestrator for a JAP submission. JAP is the APA flagship of industrial-organizational (I-O) psychology, and it accepts almost nothing on rigor alone: a paper must make a theoretical contribution to I-O science and clear a high bar on construct validity, design, and measurement. The router makes sure both gates are addressed early, then sends you to the matching skill.
When to trigger
- Starting a new JAP paper and unsure where to begin
- Mid-project and unsure which skill applies next
- Choosing among article types
- Returning with a decision letter (route to
joap-rebuttal)
First question: article type
| Situation | Type | Route note |
|---|---|---|
| Full programmatic empirical contribution | Feature Article | main pipeline below; length commensurate with contribution |
| Focused, shorter empirical contribution | Research Report | tighter page budget (待核实 exact cap); often a multi-study package |
| New conceptual/theory contribution, no new data | Theory-development article | joap-theory-and-hypotheses is the spine; design/analysis lighter |
| Cumulative synthesis of an effect | Integrative review / meta-analysis | joap-data-analysis (meta-analytic methods) + transparency for coding |
| Qualitative I-O contribution | Qualitative research | joap-study-design (trustworthiness) + joap-writing-style |
JAP weighs theory and measurement together. A clean field study with no theoretical advance, and an elegant model with weak measurement, are both common desk rejects — confirm current article types and any length caps on the official APA page.
Routing map (stage → skill)
Idea / fit for I-O science? → joap-topic-selection
Theory + hypotheses (model first)? → joap-theory-and-hypotheses
Where does it sit in the field? → joap-literature-positioning
Design / measurement / CMV / nesting? → joap-study-design
SEM / HLM / mediation / meta sound? → joap-data-analysis
Exhibits (APA, path/CFA, HLM tables)? → joap-tables-figures
Fits APA style + length? → joap-writing-style
Data/materials/code + TOP + prereg? → joap-open-science-and-transparency
How will masked reviewers judge it? → joap-review-process
Ready to submit (Editorial Manager)? → joap-submission
Got an R&R / decision? → joap-rebuttalDefault order
topic-selection → theory-and-hypotheses → literature-positioning → study-design → data-analysis → tables-figures → writing-style → open-science-and-transparency → review-process → submission → rebuttal
Theory comes before literature positioning here on purpose: JAP wants the theoretical mechanism
fixed first, then the literature marshaled to show why that mechanism is new. For meta-analyses and
theory-development articles the spine shifts — pull data-analysis (meta) or theory-and-hypotheses
(theory) forward.
Worked micro-example — routing a live project (illustrative)
A team has a two-wave field study (N = 612 employees nested in 74 teams) testing whether servant leadership raises team performance via psychological safety, plus a lab experiment for causal identification. The router walks them:
Type: Feature Article (programmatic; field + experiment, multilevel + mediation).
Entry: not idea-stage; theory and data exist → start at theory-and-hypotheses
to lock the model, then design/analysis.
Route: theory-and-hypotheses (mechanism + multilevel hypotheses)
→ study-design (CMV, nesting, temporal separation) → data-analysis
(multilevel SEM mediation, ICC, indirect-effect CIs)
→ tables-figures (path diagram + HLM table) → writing-style
→ open-science-and-transparency (TOP, data/code, prereg of the lab study)
→ review-process → submission ; on R&R → rebuttal.
Flag: The cross-level mediation needs a 1-1-2 / 2-2-2 design statement and a
CMV remedy declared up front, or Reviewer 2 will lead with it.Show full SKILL.md (217 more words)Show less
Stage-triage table (symptom → skill)
| What the author says | Stage | Route to |
|---|---|---|
| "Is this even right for JAP?" | fit | joap-topic-selection |
| "Reviewers say no theoretical contribution" | theory | joap-theory-and-hypotheses |
| "Same-source self-report — common method bias?" | design | joap-study-design |
| "My mediation/HLM is questioned" | analysis | joap-data-analysis |
| "Where do I put data and code?" | transparency | joap-open-science-and-transparency |
| "I have an R&R from three reviewers" | revision | joap-rebuttal |
Routing pitfalls specific to this venue
- Sending a paper straight to
joap-data-analysiswhen the deeper problem is that no theoretical contribution has been articulated — JAP rejects rigorous-but-atheoretical work; fix theory first. - Deferring
joap-study-designuntil after data: common-method variance, temporal separation, and nesting are design decisions; you cannot fully repair them at the analysis stage. - Treating
joap-open-science-and-transparencyas a formality — JAP holds submissions to the TOP framework; deposits and statements should be built early, not promised at acceptance.
Anti-patterns
- A rigorous field study with no advance in I-O theory (rigor is necessary, not sufficient)
- Cross-sectional single-source self-report offered as the whole evidentiary base
- Hypotheses stated after the results were known (HARKing)
- Leaving construct validity and measurement to an afterthought
- Confusing JAP with a sibling venue (Personnel Psychology, AMJ, OBHDP, JOB) and writing to the wrong bar
Output format
【Stage】idea / theory / positioning / design / analysis / exhibits / writing / transparency / review / submit / rebut
【Type】Feature Article / Research Report / theory-development / integrative review / qualitative / meta-analysis
【Route to】joap-<skill>
【Why】one line
【Then】the next skill after thatSupplementary resources
../../resources/external_tools.md— SEM/HLM/meta-analysis software, preregistration, repositories, APA tooling../../resources/official-source-map.md— official APA Journal of Applied Psychology URLs behind every fact in this pack
© brycewang-stanford, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
Files
Just SKILL.md in Journal-of-Applied-Psychology-Skills/skills/joap-workflow of brycewang-stanford/Awesome-Journal-Skills.
Open the folder on GitHubat commit 932eb23
Compare with similar skills
Joap Workflow next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Joap Workflow this skillbrycewang-stanford/Awesome-Journal-Skills | 1.2k | — | ~1.7k | Automated safety check: Pass | MIT | |
| GitHub Deep Researchbytedance/deer-flow | 84k | 4 repos | ~1.3k | Automated safety check: Pass | MIT | |
| Deep Research WorkflowTokenRhythm/opensquilla | 7.1k | — | ~1.3k | Automated safety check: Pass | Apache-2.0 | |
| Deep Researchsanjay3290/ai-skills | 431 | 9 repos | ~683 | Automated safety check: Notes | Apache-2.0 | |
| Horizontal-Vertical Deep ResearchKKKKhazix/khazix-skills | 21k | — | ~2.1k | Automated safety check: Pass | MIT | |
| Academic Research PipelineImbad0202/academic-research-skills | 51k | — | ~15k | Automated safety check: Pass | Custom licence |
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Deep Research Workflow
TokenRhythm/opensquilla
Runs multi-round research in three stages with a persisted state file, evidence tracking and a long-form report with per-claim citations.
Deep Research
sanjay3290/ai-skills
Execute autonomous multi-step research using Google Gemini Deep Research Agent.
Horizontal-Vertical Deep Research
KKKKhazix/khazix-skills
Runs a two-axis deep research method on a product, company, concept or person: its full history over time, compared with peers today, delivered as a typeset PDF report.
Academic Research Pipeline
Imbad0202/academic-research-skills
Orchestrates a ten-stage academic workflow from research to finished manuscript, including integrity checks, two rounds of peer review and revision.
Academic Research Suite for Codex
Imbad0202/academic-research-skills-codex
A router skill that sends academic work such as literature reviews, drafting, citation checks, peer review and revision to the right workflow in the ARS suite.
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Questions about Joap Workflow
What does Joap Workflow do?
A skill your agent uses when starting or navigating any Journal of Applied Psychology (JAP) manuscript and you are unsure which sub-skill applies. Joap Workflow is an agent skill from brycewang-stanford/Awesome-Journal-Skills. Use when starting or navigating any Journal of Applied Psychology (JAP) manuscript and you are unsure which sub-skill applies.
When should I use Joap Workflow?
Joap Workflow fits situations like: navigating any Journal of Applied Psychology (JAP) manuscript and you are unsure which sub-skill applies; choosing among article types; returning with a decision letter.
How do I install Joap Workflow in Claude Code?
Run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill joap-workflow -a claude-code`. Or copy the skill folder (Journal-of-Applied-Psychology-Skills/skills/joap-workflow in brycewang-stanford/Awesome-Journal-Skills) into .claude/skills/joap-workflow in your project. Claude Code loads it when a task matches its description.
How do I install Joap Workflow in Codex?
Run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill joap-workflow -a codex`. Or copy the skill folder (Journal-of-Applied-Psychology-Skills/skills/joap-workflow in brycewang-stanford/Awesome-Journal-Skills) into .agents/skills/joap-workflow in your project. Codex loads it when a task matches its description.
Can I use Joap Workflow in Cursor, Gemini CLI or GitHub Copilot?
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill joap-workflow -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/joap-workflow, .gemini/skills/joap-workflow, .github/skills/joap-workflow and .opencode/skills/joap-workflow in your project.
What does Joap Workflow need to run?
SKILL.md names no scripts, command-line tools or credentials: Joap Workflow is instructions for the agent only.
Does Joap Workflow access the network?
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Is Joap Workflow safe to install?
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
What licence does Joap Workflow use?
Joap Workflow is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
How many tokens does Joap Workflow use?
About 1.7k tokens (SKILL.md is roughly 6.9k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
What are the alternatives to Joap Workflow?
Skills that share tags, products or a category with Joap Workflow: GitHub Deep Research (bytedance/deer-flow, 84k stars), Deep Research Workflow (TokenRhythm/opensquilla, 7.1k stars), Deep Research (sanjay3290/ai-skills, 431 stars) and Horizontal-Vertical Deep Research (KKKKhazix/khazix-skills, 21k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
Who maintains Joap Workflow?
brycewang-stanford (a GitHub user) maintains it in brycewang-stanford/Awesome-Journal-Skills, which has 1,228 GitHub stars. The repository holds 2,387 skills in this directory. The repository was last updated on September 27, 2026.
Source: brycewang-stanford/Awesome-Journal-Skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.