Citation Verification Guide
Galaxy-Dawn/claude-scholar
Reference guidance for checking every citation in academic writing against canonical sources such as DOI, arXiv, CrossRef and Semantic Scholar, to catch fake or wrong references.
Use figure reference checker for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.
$ npx skills add aipoch/medical-research-skills --skill figure-reference-checker -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install aipoch/medical-research-skills figure-reference-checker --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/'scientific-skills/Academic Writing/figure-reference-checker' .claude/skills/figure-reference-checker && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "figure-reference-checker" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/scientific-skills/Academic%20Writing/figure-reference-checker into .claude/skills/figure-reference-checker/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "figure-reference-checker", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/aipoch/medical-research-skills/tree/main/scientific-skills/Academic%20Writing/figure-reference-checkerType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add aipoch/medical-research-skills --skill figure-reference-checker -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install aipoch/medical-research-skills figure-reference-checker --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .agents/skills && cp -r skills-src/'scientific-skills/Academic Writing/figure-reference-checker' .agents/skills/figure-reference-checker && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "figure-reference-checker" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/scientific-skills/Academic%20Writing/figure-reference-checker into .agents/skills/figure-reference-checker/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "figure-reference-checker", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add aipoch/medical-research-skills --skill figure-reference-checker -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install aipoch/medical-research-skills figure-reference-checker --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/'scientific-skills/Academic Writing/figure-reference-checker' .cursor/skills/figure-reference-checker && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "figure-reference-checker" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/scientific-skills/Academic%20Writing/figure-reference-checker into .cursor/skills/figure-reference-checker/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "figure-reference-checker", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/aipoch/medical-research-skills.git --path 'scientific-skills/Academic Writing/figure-reference-checker'--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add aipoch/medical-research-skills --skill figure-reference-checker -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install aipoch/medical-research-skills figure-reference-checker --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/'scientific-skills/Academic Writing/figure-reference-checker' .gemini/skills/figure-reference-checker && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "figure-reference-checker" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/scientific-skills/Academic%20Writing/figure-reference-checker into .gemini/skills/figure-reference-checker/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "figure-reference-checker", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install aipoch/medical-research-skills figure-reference-checkerInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add aipoch/medical-research-skills --skill figure-reference-checker -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .github/skills && cp -r skills-src/'scientific-skills/Academic Writing/figure-reference-checker' .github/skills/figure-reference-checker && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "figure-reference-checker" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/scientific-skills/Academic%20Writing/figure-reference-checker into .github/skills/figure-reference-checker/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "figure-reference-checker", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add aipoch/medical-research-skills --skill figure-reference-checker -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install aipoch/medical-research-skills figure-reference-checker --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/'scientific-skills/Academic Writing/figure-reference-checker' .opencode/skills/figure-reference-checker && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "figure-reference-checker" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/scientific-skills/Academic%20Writing/figure-reference-checker into .opencode/skills/figure-reference-checker/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "figure-reference-checker", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
figure-reference-checkerUse figure reference checker for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.
Figure Reference Checker is an agent skill from aipoch/medical-research-skills. Use figure reference checker for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.
Its SKILL.md is about 2k tokens, which your agent loads only when the skill is triggered. The skill folder holds 6 other files, including scripts and reference files (for example `POLISH_CHANGELOG.md`, `eval_report_figure-reference-checker_result.json` and `references/audit-reference.md`).
It sits in Research & Science, covering Scientific writing. The repository describes itself as: Hundreds of agent skills for medical research, including protocol design, data analysis, evidence insights, and academic writing. The licence is MIT.
5 steps, taken from the first numbered list in SKILL.md.
Read from SKILL.md and the folder at commit 686e09d. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Ships 1 file in scripts/ (Python), which the agent can run.
Shell commands in SKILL.md call:
pythonFrom the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Figure Reference Checker loads about 2k tokens when it runs, and up to ~2.1k if it reads all its reference files. Until then it costs about 42 tokens; SKILL.md has 944 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); the scripts in this folder are not scanned.
The full file from aipoch/medical-research-skills at commit 686e09d, republished under its MIT licence (© aipoch). 944 words, ~1,972 tokens.
.claude/skills/figure-reference-checker/SKILL.md (or your agent's skills folder). This skill also uses 4 other files; get the full folder from GitHub.Check consistency of figure references in manuscripts.
Use this command to verify that the packaged script entry point can be parsed before deeper execution.
python -m py_compile scripts/main.pyUse these concrete commands for validation. They are intentionally self-contained and avoid placeholder paths.
python -m py_compile scripts/main.py
python scripts/main.py --help| Parameter | Type | Default | Required | Description |
|---|---|---|---|---|
--manuscript, -m | string | - | Yes | Path to manuscript file |
python scripts/main.py --manuscript paper.docx| Risk Indicator | Assessment | Level |
|---|---|---|
| Code Execution | Python/R scripts executed locally | Medium |
| Network Access | No external API calls | Low |
| File System Access | Read input files, write output files | Medium |
| Instruction Tampering | Standard prompt guidelines | Low |
| Data Exposure | Output files saved to workspace | Low |
No additional Python packages required.
Every final response should make these items explicit when they are relevant:
scripts/main.py fails, report the failure point, summarize what still can be completed safely, and provide a manual fallback.This skill accepts requests that match the documented purpose of figure-reference-checker and include enough context to complete the workflow safely.
Do not continue the workflow when the request is out of scope, missing a critical input, or would require unsupported assumptions. Instead respond:
figure-reference-checkeronly handles its documented workflow. Please provide the missing required inputs or switch to a more suitable skill.
Use the following fixed structure for non-trivial requests:
If the request is simple, you may compress the structure, but still keep assumptions and limits explicit when they affect correctness.
| Field | Required | Format/Source | Example | If Missing |
|---|---|---|---|---|
| User task description | Yes | Text | Research question, writing goal, analysis objective | Stop and ask user to provide |
| Primary input material | Depends on task | Text, file path, ID, table, or literature | PMID, PDF, CSV, DOCX, keywords, etc. | Specify which material type is missing |
| Output preference | No | Text | Language, format, target journal, template | Use skill default format |
© aipoch, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
SKILL.md and 4 other files (scripts, references) in scientific-skills/Academic Writing/figure-reference-checker of aipoch/medical-research-skills.
Open the folder on GitHubat commit 686e09d
Figure Reference Checker next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Figure Reference Checker this skillaipoch/medical-research-skills | 2k | — | ~2k | Automated safety check: Pass | MIT | |
| Citation Verification GuideGalaxy-Dawn/claude-scholar | 5.7k | 3 repos | ~1.9k | Automated safety check: Pass | MIT | |
| Nature-Style Scientific FiguresYuan1z0825/nature-skills | 46k | — | ~2.9k | Automated safety check: Pass | Apache-2.0 | |
| Citation ManagementK-Dense-AI/claude-scientific-writer | 2.4k | 3 repos | ~3.9k | Automated safety check: Notes | MIT | |
| Academic Paper Composerlishix520/academic-paper-skills | 1.4k | 2 repos | ~6.3k | Automated safety check: Pass | MIT | |
| Academic Paper Writing PipelineImbad0202/academic-research-skills | 51k | — | ~16k | Automated safety check: Pass | Custom licence |
Galaxy-Dawn/claude-scholar
Reference guidance for checking every citation in academic writing against canonical sources such as DOI, arXiv, CrossRef and Semantic Scholar, to catch fake or wrong references.
Yuan1z0825/nature-skills
Creates, revises, audits and exports manuscript-ready scientific figures in Python or R, and routes AI-generated graphical abstracts to a separate workflow.
K-Dense-AI/claude-scientific-writer
Finds papers in OpenAlex, PubMed and Google Scholar, turns DOIs, PMIDs and arXiv IDs into clean BibTeX, and validates citations for a manuscript or thesis.
lishix520/academic-paper-skills
Systematic writing framework for philosophy and interdisciplinary academic papers from optimized outline to submission-ready manuscript.
Imbad0202/academic-research-skills
Runs a 12-agent pipeline that plans, drafts, cites, reviews and formats academic papers, with modes for revision, rebuttals, abstracts and citation checks.
davila7/claude-code-templates
Supplies LaTeX templates and formatting rules for journals, conferences, posters, and grant proposals, then can check a draft against them.
aipoch/medical-research-skills
Complete workflow for generating academic research posters from PDF literature; use when you need to extract paper content from PDFs and produce a LaTeX-based poster…
aipoch/medical-research-skills
Analyzes clinical diagnostic accuracy studies for bias using the QUADAS-2 tool.
aipoch/medical-research-skills
Perform comprehensive exploratory data analysis on scientific data files across 200+ file formats.
aipoch/medical-research-skills
A toolkit for preparing ISO 13485:2016 certification documentation for medical device QMS.
aipoch/medical-research-skills
Recommends target journals for manuscript submission by analyzing the paper topic/abstract and the journal distribution of similar PubMed literature; use when users ask for journal…
aipoch/medical-research-skills
Creates academic-poster writing packages for LaTeX using beamerposter, tikzposter, or baposter.
Categories
Use figure reference checker for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries. Figure Reference Checker is an agent skill from aipoch/medical-research-skills. Use figure reference checker for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.
Figure Reference Checker fits situations like: tasks that involve Scientific writing.
Run `npx skills add aipoch/medical-research-skills --skill figure-reference-checker -a claude-code`. Or copy the skill folder (scientific-skills/Academic Writing/figure-reference-checker in aipoch/medical-research-skills) into .claude/skills/figure-reference-checker in your project. Claude Code loads it when a task matches its description.
Run `npx skills add aipoch/medical-research-skills --skill figure-reference-checker -a codex`. Or copy the skill folder (scientific-skills/Academic Writing/figure-reference-checker in aipoch/medical-research-skills) into .agents/skills/figure-reference-checker in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add aipoch/medical-research-skills --skill figure-reference-checker -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/figure-reference-checker, .gemini/skills/figure-reference-checker, .github/skills/figure-reference-checker and .opencode/skills/figure-reference-checker in your project.
Going by SKILL.md and its folder, Figure Reference Checker needs Python for the scripts in its folder and the command-line tools its instructions call (python). Our summary lists: Python 3.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. The check reads SKILL.md only: the scripts in the folder are not scanned, so read them before running anything.
Figure Reference Checker is published under the MIT licence (declared in SKILL.md). It allows redistribution, so the full SKILL.md is shown on this page.
About 2k tokens (SKILL.md is roughly 7.9k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full. Its references folder adds about 178 tokens, read only when the agent opens those files.
Skills that share tags, products or a category with Figure Reference Checker: Citation Verification Guide (Galaxy-Dawn/claude-scholar, 5.7k stars), Nature-Style Scientific Figures (Yuan1z0825/nature-skills, 46k stars), Citation Management (K-Dense-AI/claude-scientific-writer, 2.4k stars) and Academic Paper Composer (lishix520/academic-paper-skills, 1.4k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
aipoch (a GitHub organization) maintains it in aipoch/medical-research-skills, which has 1,974 GitHub stars. The repository holds 567 skills in this directory. The repository was last updated on September 17, 2026.
Source: aipoch/medical-research-skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.