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PubMed agent skills, page 3
PubMed skills, ranked
Ranked by score. Sort bymost stars,trending,newest,recently updated
| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 97 | Automatically find references for academic paper Markdown files. | aipoch/ | 2k | — | ~3.2k | Automated safety check: Notes | MIT | 21 days ago |
| 98 | EndNote reference formatting workflow — converts [PMID: xxxx] markers in Markdown manuscripts to Word (.docx) using EndNote CWYW-recognized {Author, Year, Title} placeholders, while generating .ris… | aipoch/ | 2k | — | ~1.5k | Automated safety check: Pass | MIT | 21 days ago |
| 99 | Zotero reference formatting workflow. An agent skill from aipoch/medical-research-skills. | aipoch/ | 2k | — | ~1.9k | Automated safety check: Pass | MIT | 21 days ago |
| 100 | 100.Fulltext Fetcher Fetch and save the original HTML of scientific literature webpages when given a URL, DOI, or PubMed PMID (triggered when you need archival-grade page HTML for downstream parsing or review). | aipoch/ | 2k | — | ~2.2k | Automated safety check: Pass | MIT | 21 days ago |
| 101 | Screen full-text papers against inclusion/exclusion criteria, with optional PubMed metadata check using PMID. | aipoch/ | 2k | — | ~1.4k | Automated safety check: Pass | MIT | 21 days ago |
| 102 | Generates academic reviews for molecules in diseases using PubMed research. | aipoch/ | 2k | — | ~1.8k | Automated safety check: Pass | MIT | 21 days ago |
| 103 | Download PubMed/PMC literature using officially permitted PMC methods. | aipoch/ | 2k | — | ~2.7k | Automated safety check: Pass | MIT | 21 days ago |
| 104 | Based on user input, directly find relevant literature or automatically construct PubMed Boolean search queries to retrieve and filter references suitable for citation. | aipoch/ | 2k | — | ~2.1k | Automated safety check: Pass | MIT | 21 days ago |
| 105 | 105.Search Pubmed An intelligent tool for precision medical literature search using PubMed's E-utilities API. | aipoch/ | 2k | — | ~1.3k | Automated safety check: Pass | MIT | 21 days ago |
| 106 | Find the papers that answer a research query in Firecrawl's research paper index — a corpus of paper abstracts whose largest share is biomedical and life-science literature (PubMed, bioRxiv… | firecrawl/ | 116 | — | ~2.4k | Automated safety check: Pass | ISC | yesterday |
| 107 | 107.Biopython Entrez Use Bio.Entrez to access NCBI databases (e.g., PubMed/GenBank) for searching, fetching summaries, and downloading records when your workflow needs to call the NCBI E-utilities API over the network. | aipoch/ | 2k | — | ~1.5k | Automated safety check: Pass | MIT | 21 days ago |
| 108 | Medical literature search strategy generator. An agent skill from aipoch/medical-research-skills. | aipoch/ | 2k | — | ~1.6k | Automated safety check: Pass | MIT | 21 days ago |
| 109 | Perform science mapping and bibliometric analysis with R bibliometrix | wentorai/ | 298 | 1 repo | ~1.2k | Automated safety check: Pass | MIT | 3 mo ago |
| 110 | Master Boolean operators and advanced search syntax for academic databases | wentorai/ | 298 | 1 repo | ~1.5k | Automated safety check: Pass | MIT | 3 mo ago |
| 111 | Compare major academic databases and when to use each for research | wentorai/ | 298 | 1 repo | ~1.2k | Automated safety check: Pass | MIT | 3 mo ago |
| 112 | 112.Europe Pmc API Search biomedical and life sciences literature via Europe PMC | wentorai/ | 298 | 1 repo | ~1.6k | Automated safety check: Pass | MIT | 3 mo ago |
| 113 | Multi-agent system for biomedical literature review and synthesis | wentorai/ | 298 | 1 repo | ~1.2k | Automated safety check: Pass | MIT | 3 mo ago |
| 114 | 114.Mesh Terms Guide Navigate MeSH vocabulary for precise PubMed and MEDLINE searches | wentorai/ | 298 | 1 repo | ~1.3k | Automated safety check: Pass | MIT | 3 mo ago |
| 115 | 115.Pmc Oai API PubMed Central OAI-PMH metadata harvesting. An agent skill from wentorai/research-plugins. | wentorai/ | 298 | 1 repo | ~2.1k | Automated safety check: Pass | MIT | 3 mo ago |
| 116 | 116.Pubmed API Search biomedical literature and retrieve records via PubMed E-utilities | wentorai/ | 298 | 1 repo | ~1.6k | Automated safety check: Pass | MIT | 3 mo ago |
| 117 | A skill your agent uses to retrieve official biomedical or healthcare public records, choose between ClinicalTrials.gov, PubMed, FDA and CMS sources, inspect data vintage and query completeness, or… | hh-health-AI/ | 101 | — | ~696 | Automated safety check: Pass | MIT | 3 days ago |
| 118 | A skill your agent uses when retrieving ClinicalTrials.gov, PubMed, openFDA or CMS catalog and sample data, integrating public biomedical tools through MCP or checking query completeness and vintage. | hh-health-AI/ | 101 | — | ~858 | Automated safety check: Pass | MIT | 3 days ago |
| 119 | 119.Literature Kol This skill should be used when the user says "triage the [conference] abstracts", "what's the literature saying about [drug/mechanism]", "scan PubMed for X", "KOL view on [asset]", "evidence… | hh-health-AI/ | 101 | — | ~599 | Automated safety check: Pass | MIT | 3 days ago |
| 120 | Search PubMed database for scientific articles and publications to retrieve biomedical literature. | InternScience/ | 169 | 1 repo | ~641 | Automated safety check: Pass | MIT | 4 mo ago |
| 121 | 121.Ena Database ENA REST API for sequences, reads, assemblies, and annotations. | jaechang-hits/ | 370 | 1 repo | ~5.3k | Automated safety check: Pass | Unknown | 9 days ago |
| 122 | 122.Pubmed Search PubMed for scientific literature and retrieve abstracts | lamm-mit/ | 244 | — | ~817 | Automated safety check: Pass | Apache-2.0 | 1 mo ago |
| 123 | Verify, normalize, and enrich a single citation or paper identifier. | hashgraph-online/ | 1.2k | — | ~548 | Automated safety check: Pass | Apache-2.0 | today |
| 124 | 124.Pubmed Search Search PubMed biomedical literature with natural language queries powered by Valyu semantic search. | wu-yc/ | 1.1k | — | ~1.4k | Automated safety check: Pass | MIT | 6 mo ago |
| 125 | Use AI4Scholar for real scholarly literature tasks through MCP or the OpenClaw plugin: paper search, Google Scholar/Semantic Scholar/PubMed/arXiv/bioRxiv/medRxiv queries, PDF download and reading… | Drchronx/ | 135 | — | ~1.4k | Automated safety check: Pass | Unknown | 4 mo ago |
| 126 | Conducting systematic, scoping, and narrative literature reviews. | jaechang-hits/ | 370 | — | ~4.1k | Automated safety check: Pass | CC-BY-4.0 | 9 days ago |
| 127 | Multi-source literature search, citation verification, MeSH search strategy, citation file management (.nbib/.ris/.bib conversion), and reference management (BibTeX, related articles, ID conversion)… | aiskillstore/ | 430 | — | ~1.1k | Automated safety check: Pass | No licence | today |
| 128 | 128.Chembl Small-molecule drug lookup by exact drug name or ChEMBL ID. An agent skill from lamm-mit/scienceclaw. | lamm-mit/ | 244 | — | ~841 | Automated safety check: Pass | Apache-2.0 | 1 mo ago |
