Agent skill

Harness Genome

by ruvnet in ruvnet/ruflo

7-section repo readiness report from metaharness genome {path}.

MITAuto-check: notesResearch & Science

Install Harness Genome

skills CLI
$ npx skills add ruvnet/ruflo --skill harness-genome -a claude-code

Project install by default; add -g for ~/.claude/skills/.

GitHub CLI
$ gh skill install ruvnet/ruflo harness-genome --agent claude-code

Project scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).

Manual copy
$ git clone --depth 1 https://github.com/ruvnet/ruflo.git skills-src && mkdir -p .claude/skills && cp -r skills-src/plugins/ruflo-metaharness/skills/harness-genome .claude/skills/harness-genome && rm -rf skills-src

Use ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.

Claude Code skills documentation · loads skills from .claude/skills/

Facts

Skill name
harness-genome
GitHub stars
74k
Token cost
~558 tokens
SKILL.md length
201 words
Files
1
Skills in repo
265
Repo updated
First seen
Licence
MIT

At a glance

7-section repo readiness report from metaharness genome {path}.

  • Works in 5 steps: Shell out to npx metaharness genome… → Parse the shape: `{ repo_type,… → Preserve upstream's readiness verdict as… → …
  • Tasks that involve Bioinformatics
  • SKILL.md covers Algorithm, Phase-0 baseline (ruflo,…, When to use and Pairs with
  • Calls npx

What it does

Harness Genome is an agent skill from ruvnet/ruflo. 7-section repo readiness report from metaharness genome {path}. Returns repotype / agenttopology / riskscore / mcpsurface / testconfidence / publishreadiness. Pure-read; degrades gracefully (ADR-150).

Its SKILL.md is about 560 tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.

It sits in Research & Science, covering Bioinformatics and Architecture decision records. It works with Model Context Protocol. The repository describes itself as: 🌊 The original agent harness. Deploy intelligent multi-player swarms, coordinate autonomous workflows, and build conversational AI systems. Features adaptive memory…. The licence is MIT.

When your agent uses it

  • Tasks that involve Bioinformatics
  • Tasks that involve Architecture decision records

Example prompts

  • “/harness-genome”

Requirements

  • Node.js
  • Pre-approved tools (allowed-tools): Bash

Workflow steps

5 steps, taken from the first numbered list in SKILL.md.

  1. Shell out to npx metaharness genome --json (60s hard timeout).
  2. Parse the shape: `{ repo_type, agent_topology[], risk_score,
  3. Preserve upstream's readiness verdict as verdict and
  4. If --alert-on-risk-above N: exit 1 when risk_score > N.
  5. Output JSON (default) or markdown.

What it can do on your machine

Read from SKILL.md and the folder at commit 6c04654. It shows what the files ask for, not the result of running them.

  • Tool permissions

    Pre-approves these tools, so the agent can use them without asking each time:

    • Bash

    From allowed-tools in the SKILL.md frontmatter.

  • Runs code

    Shell commands in SKILL.md call:

    • npx

    From the folder's file list and the shell code blocks in SKILL.md.

  • Network

    No URLs in SKILL.md. Its commands use npx, which can reach the network depending on how they are called.

    From URLs in SKILL.md, links to its own repository left out.

  • Credentials

    Names no API keys, tokens, secrets or passwords.

    From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.

Context cost

Harness Genome loads about 558 tokens when it runs. Until then it costs about 56 tokens; SKILL.md has 201 words of instructions outside code blocks.

Always · name and description, kept in context so the agent knows when to use it
~56
When it runs · the whole SKILL.md, loaded when a task matches
~558

Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.

Safety

Auto-check: notes

The automated check noted patterns worth knowing about, such as sudo or a known installer.

  • NotePre-approves every shell command (allowed-tools: Bash)SKILL.md
    allowed-tools: Bash

Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.

SKILL.md

The full file from ruvnet/ruflo at commit 6c04654, republished under its MIT licence (© ruvnet). 201 words, ~558 tokens.

Download SKILL.mdSave it as .claude/skills/harness-genome/SKILL.md (or your agent's skills folder).
name
harness-genome
description
7-section repo readiness report from `metaharness genome {path}`. Returns repo_type / agent_topology / risk_score / mcp_surface / test_confidence / publish_readiness. Pure-read; degrades gracefully (ADR-150).
allowed-tools
Bash
argument-hint
[--path .] [--alert-on-risk-above 0.5] [--format table|json]

Companion to harness-score. Where score is a 5-dimension numeric scorecard, genome is a 7-section categorical/numeric report covering repo type, agent topology recommendations, risk score (0-1), MCP surface area, test confidence (0-1), and publish readiness (0-1).

Algorithm

Implementation: scripts/genome.mjs.

  1. Shell out to npx metaharness genome <path> --json (60s hard timeout).
  2. Parse the shape: { repo_type, agent_topology[], risk_score, mcp_surface, test_confidence, publish_readiness }.
  3. Preserve upstream's readiness verdict as verdict and verdictExitCode. Upstream exits 1 for needs-work and 2 for blocked; these are valid reports, so the wrapper returns them successfully.
  4. If --alert-on-risk-above N: exit 1 when risk_score > N.
  5. Output JSON (default) or markdown.

Phase-0 baseline (ruflo, measured 2026-06-16)

{
  "repo_type": "node_mcp_ci",
  "agent_topology": ["maintainer", "tester", "security", "release"],
  "risk_score": 0.27,
  "mcp_surface": "remote",
  "test_confidence": 0.8,
  "publish_readiness": 0.9
}

Ruflo's risk_score: 0.27 is low (good). publish_readiness: 0.9 is high. The mcp_surface: "remote" reflects that ruflo's MCP servers are hosted, not bundled.

When to use

  • Pre-mint review: "before scaffolding a custom harness from this repo, should we?" — genome answers it categorically.
  • Drift detection: capture genome snapshots over time, diff via cost-diff-style tooling to spot when agent_topology recommendations drift away from a deliberate architecture choice.
  • CI gate: --alert-on-risk-above 0.5 fails the build when the repo's risk profile crosses a threshold.

Pairs with

  • harness-score — numeric readiness
  • harness-mcp-scan — static MCP security findings
  • harness-threat-model — enterprise-review-grade threat model

© ruvnet, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file

Files

Just SKILL.md in plugins/ruflo-metaharness/skills/harness-genome of ruvnet/ruflo.

Open the folder on GitHubat commit 6c04654

Compare with similar skills

Harness Genome next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.

Harness Genome compared with similar skills
SkillStarsUsed inTokensAuto-checkLicenceRepo updated
Harness Genome this skillruvnet/ruflo74k—~558Automated safety check: NotesMIT
Repo Genomeruvnet/metaharness696—~772Automated safety check: PassMIT
Genomiexon-research/genomi484—~4kAutomated safety check: PassApache-2.0
Hcls Build Agentaws-samples/amazon-bedrock-agents-healthcare-lifesciences274—~885Automated safety check: PassMIT-0
Genomilabexon-research/genomi484—~4.2kAutomated safety check: PassApache-2.0
Tooluniverseynulihao/AgentSkillOS6182 repos~2.5kAutomated safety check: PassNone

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Questions about Harness Genome

What does Harness Genome do?

7-section repo readiness report from metaharness genome {path}. Harness Genome is an agent skill from ruvnet/ruflo. 7-section repo readiness report from metaharness genome {path}.

When should I use Harness Genome?

Harness Genome fits situations like: tasks that involve Bioinformatics; tasks that involve Architecture decision records.

How do I install Harness Genome in Claude Code?

Run `npx skills add ruvnet/ruflo --skill harness-genome -a claude-code`. Or copy the skill folder (plugins/ruflo-metaharness/skills/harness-genome in ruvnet/ruflo) into .claude/skills/harness-genome in your project. Claude Code loads it when a task matches its description.

How do I install Harness Genome in Codex?

Run `npx skills add ruvnet/ruflo --skill harness-genome -a codex`. Or copy the skill folder (plugins/ruflo-metaharness/skills/harness-genome in ruvnet/ruflo) into .agents/skills/harness-genome in your project. Codex loads it when a task matches its description.

Can I use Harness Genome in Cursor, Gemini CLI or GitHub Copilot?

Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add ruvnet/ruflo --skill harness-genome -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/harness-genome, .gemini/skills/harness-genome, .github/skills/harness-genome and .opencode/skills/harness-genome in your project.

What does Harness Genome need to run?

Going by SKILL.md and its folder, Harness Genome needs the command-line tools its instructions call (npx). Our summary lists: Node.js. Its frontmatter pre-approves these tools: Bash.

Does Harness Genome access the network?

SKILL.md contains no URLs. Its commands use npx, which can reach the network depending on how they are called. This is read from the text; nothing was executed.

Is Harness Genome safe to install?

Our automated static check of SKILL.md found notes only (pre-approves every shell command (allowed-tools: bash)), nothing it rates as a warning. It is not a guarantee. Review the folder before installing.

What licence does Harness Genome use?

Harness Genome is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.

How many tokens does Harness Genome use?

About 558 tokens (SKILL.md is roughly 2.2k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.

What are the alternatives to Harness Genome?

Skills that share tags, products or a category with Harness Genome: Repo Genome (ruvnet/metaharness, 696 stars), Genomi (exon-research/genomi, 484 stars), Hcls Build Agent (aws-samples/amazon-bedrock-agents-healthcare-lifesciences, 274 stars) and Genomilab (exon-research/genomi, 484 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.

Who maintains Harness Genome?

ruvnet (a GitHub user) maintains it in ruvnet/ruflo, which has 74,222 GitHub stars. The repository holds 265 skills in this directory. The repository was last updated on October 10, 2026.

Source: ruvnet/ruflo on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.