Nature-Style Scientific Figures
Yuan1z0825/nature-skills
Creates, revises, audits and exports manuscript-ready scientific figures in Python or R, and routes AI-generated graphical abstracts to a separate workflow.
Cancer Research (AACR) figures: resolution (300-1200 DPI), formats (EPS/TIFF/AI), hierarchical panel labels (Ai, Aii, Bi), figure/table limits, legend requirements with replicate counts.
$ npx skills add jaechang-hits/SciAgent-Skills --skill cancer-research-figure-guide -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install jaechang-hits/SciAgent-Skills cancer-research-figure-guide --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/jaechang-hits/SciAgent-Skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/scientific-writing/cancer-research-figure-guide .claude/skills/cancer-research-figure-guide && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "cancer-research-figure-guide" agent skill from https://github.com/jaechang-hits/SciAgent-Skills/tree/main/skills/scientific-writing/cancer-research-figure-guide into .claude/skills/cancer-research-figure-guide/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "cancer-research-figure-guide", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/jaechang-hits/SciAgent-Skills/tree/main/skills/scientific-writing/cancer-research-figure-guideType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add jaechang-hits/SciAgent-Skills --skill cancer-research-figure-guide -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install jaechang-hits/SciAgent-Skills cancer-research-figure-guide --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/jaechang-hits/SciAgent-Skills.git skills-src && mkdir -p .agents/skills && cp -r skills-src/skills/scientific-writing/cancer-research-figure-guide .agents/skills/cancer-research-figure-guide && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "cancer-research-figure-guide" agent skill from https://github.com/jaechang-hits/SciAgent-Skills/tree/main/skills/scientific-writing/cancer-research-figure-guide into .agents/skills/cancer-research-figure-guide/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "cancer-research-figure-guide", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add jaechang-hits/SciAgent-Skills --skill cancer-research-figure-guide -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install jaechang-hits/SciAgent-Skills cancer-research-figure-guide --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/jaechang-hits/SciAgent-Skills.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/skills/scientific-writing/cancer-research-figure-guide .cursor/skills/cancer-research-figure-guide && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "cancer-research-figure-guide" agent skill from https://github.com/jaechang-hits/SciAgent-Skills/tree/main/skills/scientific-writing/cancer-research-figure-guide into .cursor/skills/cancer-research-figure-guide/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "cancer-research-figure-guide", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/jaechang-hits/SciAgent-Skills.git --path skills/scientific-writing/cancer-research-figure-guide--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add jaechang-hits/SciAgent-Skills --skill cancer-research-figure-guide -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install jaechang-hits/SciAgent-Skills cancer-research-figure-guide --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/jaechang-hits/SciAgent-Skills.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/skills/scientific-writing/cancer-research-figure-guide .gemini/skills/cancer-research-figure-guide && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "cancer-research-figure-guide" agent skill from https://github.com/jaechang-hits/SciAgent-Skills/tree/main/skills/scientific-writing/cancer-research-figure-guide into .gemini/skills/cancer-research-figure-guide/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "cancer-research-figure-guide", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install jaechang-hits/SciAgent-Skills cancer-research-figure-guideInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add jaechang-hits/SciAgent-Skills --skill cancer-research-figure-guide -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/jaechang-hits/SciAgent-Skills.git skills-src && mkdir -p .github/skills && cp -r skills-src/skills/scientific-writing/cancer-research-figure-guide .github/skills/cancer-research-figure-guide && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "cancer-research-figure-guide" agent skill from https://github.com/jaechang-hits/SciAgent-Skills/tree/main/skills/scientific-writing/cancer-research-figure-guide into .github/skills/cancer-research-figure-guide/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "cancer-research-figure-guide", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add jaechang-hits/SciAgent-Skills --skill cancer-research-figure-guide -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install jaechang-hits/SciAgent-Skills cancer-research-figure-guide --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/jaechang-hits/SciAgent-Skills.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/skills/scientific-writing/cancer-research-figure-guide .opencode/skills/cancer-research-figure-guide && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "cancer-research-figure-guide" agent skill from https://github.com/jaechang-hits/SciAgent-Skills/tree/main/skills/scientific-writing/cancer-research-figure-guide into .opencode/skills/cancer-research-figure-guide/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "cancer-research-figure-guide", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
cancer-research-figure-guideCancer Research (AACR) figures: resolution (300-1200 DPI), formats (EPS/TIFF/AI), hierarchical panel labels (Ai, Aii, Bi), figure/table limits, legend requirements with replicate counts.
Cancer Research Figure Guide is an agent skill from jaechang-hits/SciAgent-Skills. Cancer Research (AACR) figures: resolution (300-1200 DPI), formats (EPS/TIFF/AI), hierarchical panel labels (Ai, Aii, Bi), figure/table limits, legend requirements with replicate counts.
Its SKILL.md is about 2.8k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts. Compatibility notes: Python 3.10+, Pillow, Matplotlib
It sits in Research & Science, covering Scientific writing. The repository describes itself as: 197 bioinformatics & life science skills for Claude Code and AI agents — BixBench 92.0% accuracy. RNA-seq, single-cell, drug discovery, proteomics, and more. Powers OmicsHorizon. The licence is CC-BY-4.0.
3 steps, taken from the first numbered list in SKILL.md.
Read from SKILL.md and the folder at commit 82c862c. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
No scripts in the folder and no shell commands in SKILL.md (its code samples are python).
From the folder's file list and the shell code blocks in SKILL.md.
Links to these hosts (documentation or services it may open):
aacrjournals.orgFrom URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Python 3.10+, Pillow, Matplotlib
From compatibility in the SKILL.md frontmatter.
Cancer Research Figure Guide loads about 2.8k tokens when it runs. Until then it costs about 54 tokens; SKILL.md has 971 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
The full file from jaechang-hits/SciAgent-Skills at commit 82c862c, republished under its CC-BY-4.0 licence (© jaechang-hits). 971 words, ~2,818 tokens.
.claude/skills/cancer-research-figure-guide/SKILL.md (or your agent's skills folder).This guide provides the complete specifications for preparing figures for submission to Cancer Research and other AACR (American Association for Cancer Research) journals. Cancer Research has a distinctive hierarchical panel labeling system (Ai, Aii, Bi, Bii) and strict limits on the total number of display items.
Official reference: https://aacrjournals.org/pages/article-style-and-format
| Image Type | Minimum Resolution |
|---|---|
| Line art | 1,200 DPI |
| Halftone / color images | 300 DPI |
| Combination artwork | 600-900 DPI |
from PIL import Image
def check_cancer_res_resolution(image_path, image_type='halftone'):
"""Check if image meets Cancer Research resolution requirements.
Args:
image_type: 'lineart' (1200), 'halftone' (300), or 'combination' (600)
"""
min_dpi = {'lineart': 1200, 'halftone': 300, 'combination': 600}
required = min_dpi.get(image_type, 300)
img = Image.open(image_path)
dpi = img.info.get('dpi', (72, 72))
print(f"Type: {image_type} | Required: {required} DPI | Actual: {dpi[0]} DPI")
passed = dpi[0] >= required
print("PASS" if passed else f"FAIL: Need {required} DPI minimum")
return passed| Format | Accepted |
|---|---|
| EPS | Yes |
| TIFF | Yes |
| AI (Adobe Illustrator) | Yes |
| PSD (Photoshop) | Yes |
| PNG | Yes |
| PS (PostScript) | Yes |
| Article Type | Maximum Display Items |
|---|---|
| Research Articles | 7 figures + tables combined |
| Letters | 2 display items total |
| Element | Font | Size |
|---|---|---|
| Manuscript body text | Arial, Helvetica, or Times New Roman | 12 pt |
| Figure text | Same fonts | 8-12 pt range |
Cancer Research uses a unique three-level hierarchical labeling system:
Preferred format: Ai, Aii, Bi, Bii (NOT Aa, Ab, Ba, Bb)
def generate_cancer_res_labels(n_main_panels, sub_panels_per_main=None):
"""Generate Cancer Research hierarchical panel labels.
Args:
n_main_panels: Number of main panels (A, B, C, ...)
sub_panels_per_main: List of sub-panel counts per main panel,
or None for no sub-panels
Returns:
List of label strings
Example:
generate_cancer_res_labels(3, [2, 3, 1])
# Returns: ['Ai', 'Aii', 'Bi', 'Bii', 'Biii', 'C']
"""
import string
labels = []
roman = ['i', 'ii', 'iii', 'iv', 'v', 'vi', 'vii', 'viii']
for i in range(n_main_panels):
main_label = string.ascii_uppercase[i]
if sub_panels_per_main and sub_panels_per_main[i] > 1:
for j in range(sub_panels_per_main[i]):
labels.append(f"{main_label}{roman[j]}")
else:
labels.append(main_label)
return labels# 3 main panels: A has 2 sub-panels, B has 3, C has 1
labels = generate_cancer_res_labels(3, [2, 3, 1])
print(labels)
# Output: ['Ai', 'Aii', 'Bi', 'Bii', 'Biii', 'C']Cancer Research follows general AACR editorial policies for image integrity:
from PIL import Image
import os
def validate_cancer_res_figure(image_path, image_type='halftone'):
"""Full validation of a figure against Cancer Research requirements."""
img = Image.open(image_path)
issues = []
# 1. Resolution check
min_dpi = {'lineart': 1200, 'halftone': 300, 'combination': 600}
required = min_dpi.get(image_type, 300)
dpi = img.info.get('dpi', (72, 72))
if dpi[0] < required:
issues.append(f"Resolution {dpi[0]} DPI below {required} DPI for {image_type}")
# 2. Color mode check
if img.mode not in ('RGB', 'RGBA'):
issues.append(f"Color mode is {img.mode}; RGB recommended")
# 3. Format check
fmt = img.format
accepted = ['TIFF', 'EPS', 'PNG', 'JPEG', 'PDF']
if fmt and fmt.upper() not in accepted:
issues.append(f"Format '{fmt}' not in standard list")
# Report
print(f"=== Cancer Research Figure Validation ===")
print(f"Dimensions: {img.size[0]} x {img.size[1]} px")
print(f"DPI: {dpi[0]} x {dpi[1]}")
print(f"Color mode: {img.mode}")
print(f"Format: {fmt}")
if issues:
print(f"\nISSUES FOUND ({len(issues)}):")
for issue in issues:
print(f" - {issue}")
else:
print("\nAll checks PASSED")
print("\nREMINDER: Cancer Research limits Research Articles to 7 figures+tables total")
print("REMINDER: Legends must include number of technical AND biological replicates")
return len(issues) == 0Cancer Research uses a unique three-level labeling system: Level 1 uses capital letters (A, B, C), Level 2 uses Roman numerals (i, ii, iii), and Level 3 uses lowercase letters (a, b, c). The preferred format is Ai, Aii, Bi, Bii — not Aa, Ab, Ba, Bb. No boxes or periods surround panel labels.
Cancer Research strictly limits the total number of display items (figures + tables combined). Research Articles are limited to 7 display items; Letters are limited to 2. Planning figure composition to maximize information density within these limits is essential.
A distinctive Cancer Research requirement is that figure legends must include the number of both technical and biological replicates for each experiment shown. This transparency standard supports reproducibility and is checked during editorial review.
What type of image are you preparing?
├── Line art (diagram, schematic) → 1,200 DPI
├── Halftone (photo, micrograph) → 300 DPI
├── Combination (mixed text + image) → 600-900 DPI
└── Multi-panel figure
├── Simple panels (A, B, C) → Standard uppercase labels
└── Sub-panels needed → Hierarchical: Ai, Aii, Bi, Bii| Scenario | Format | Resolution | Labeling |
|---|---|---|---|
| Western blot with quantification | TIFF + EPS | 300 DPI (blot) + 1,200 DPI (graph) | Ai (blot), Aii (quantification) |
| Tumor growth curves | EPS or AI | Vector or 1,200 DPI | A, B, C (simple panels) |
| Immunohistochemistry panel | TIFF | 300 DPI | Ai, Aii, Bi, Bii (conditions x magnifications) |
| Flow cytometry dot plots | TIFF or PDF | 300 DPI | Hierarchical by condition |
| Kaplan-Meier survival curves | EPS or PDF | Vector | Simple A, B labeling |
Before submitting figures to Cancer Research, verify:
© jaechang-hits, CC-BY-4.0. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
Just SKILL.md in skills/scientific-writing/cancer-research-figure-guide of jaechang-hits/SciAgent-Skills.
Open the folder on GitHubat commit 82c862c
We found 1 copy of this SKILL.md (exact, near-identical or edited) in other folders, from 1 other GitHub owner. This page covers the copy in jaechang-hits/SciAgent-Skills, which our catalogue first saw on October 7, 2026.
Cancer Research Figure Guide next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Cancer Research Figure Guide this skilljaechang-hits/SciAgent-Skills | 374 | 1 repos | ~2.8k | Automated safety check: Pass | CC-BY-4.0 | |
| Nature-Style Scientific FiguresYuan1z0825/nature-skills | 47k | — | ~3.1k | Automated safety check: Pass | Apache-2.0 | |
| Citation Verification GuideGalaxy-Dawn/claude-scholar | 5.7k | 2 repos | ~1.9k | Automated safety check: Pass | MIT | |
| Citation ManagementK-Dense-AI/claude-scientific-writer | 2.4k | 2 repos | ~3.9k | Automated safety check: Notes | MIT | |
| Academic Paper Composerlishix520/academic-paper-skills | 1.4k | 2 repos | ~6.3k | Automated safety check: Pass | MIT | |
| Academic Paper Writing PipelineImbad0202/academic-research-skills | 51k | — | ~16k | Automated safety check: Pass | Custom licence |
Yuan1z0825/nature-skills
Creates, revises, audits and exports manuscript-ready scientific figures in Python or R, and routes AI-generated graphical abstracts to a separate workflow.
Galaxy-Dawn/claude-scholar
Reference guidance for checking every citation in academic writing against canonical sources such as DOI, arXiv, CrossRef and Semantic Scholar, to catch fake or wrong references.
K-Dense-AI/claude-scientific-writer
Finds papers in OpenAlex, PubMed and Google Scholar, turns DOIs, PMIDs and arXiv IDs into clean BibTeX, and validates citations for a manuscript or thesis.
lishix520/academic-paper-skills
Systematic writing framework for philosophy and interdisciplinary academic papers from optimized outline to submission-ready manuscript.
Imbad0202/academic-research-skills
Runs a 12-agent pipeline that plans, drafts, cites, reviews and formats academic papers, with modes for revision, rebuttals, abstracts and citation checks.
davila7/claude-code-templates
Supplies LaTeX templates and formatting rules for journals, conferences, posters, and grant proposals, then can check a draft against them.
jaechang-hits/SciAgent-Skills
NEB-IRC activation energy pipeline for reaction barriers using GFN2-xTB and pysisyphus.
jaechang-hits/SciAgent-Skills
3Dmol.js WebGL molecular visualization emitted as self-contained HTML.
jaechang-hits/SciAgent-Skills
Constraint-based (COBRA) analysis of genome-scale metabolic models: FBA, FVA, knockouts, flux sampling, production envelopes, gapfilling, media optimization.
jaechang-hits/SciAgent-Skills
Read, write, and edit ChemDraw CDX/CDXML files with RDKit's rdkit.Chem.rdChemDraw plus direct XML editing, always paired with a rendered PNG.
jaechang-hits/SciAgent-Skills
Programmatic PubMed access via NCBI E-utilities REST API. An agent skill from jaechang-hits/SciAgent-Skills.
jaechang-hits/SciAgent-Skills
Scaffold a new SciAgent-Skills entry. An agent skill from jaechang-hits/SciAgent-Skills.
Categories
Cancer Research (AACR) figures: resolution (300-1200 DPI), formats (EPS/TIFF/AI), hierarchical panel labels (Ai, Aii, Bi), figure/table limits, legend requirements with replicate counts. Cancer Research Figure Guide is an agent skill from jaechang-hits/SciAgent-Skills. Cancer Research (AACR) figures: resolution (300-1200 DPI), formats (EPS/TIFF/AI), hierarchical panel labels (Ai, Aii, Bi), figure/table limits, legend requirements with replicate counts.
Cancer Research Figure Guide fits situations like: tasks that involve Scientific writing.
Run `npx skills add jaechang-hits/SciAgent-Skills --skill cancer-research-figure-guide -a claude-code`. Or copy the skill folder (skills/scientific-writing/cancer-research-figure-guide in jaechang-hits/SciAgent-Skills) into .claude/skills/cancer-research-figure-guide in your project. Claude Code loads it when a task matches its description.
Run `npx skills add jaechang-hits/SciAgent-Skills --skill cancer-research-figure-guide -a codex`. Or copy the skill folder (skills/scientific-writing/cancer-research-figure-guide in jaechang-hits/SciAgent-Skills) into .agents/skills/cancer-research-figure-guide in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add jaechang-hits/SciAgent-Skills --skill cancer-research-figure-guide -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/cancer-research-figure-guide, .gemini/skills/cancer-research-figure-guide, .github/skills/cancer-research-figure-guide and .opencode/skills/cancer-research-figure-guide in your project.
SKILL.md names no scripts, command-line tools or credentials: Cancer Research Figure Guide is instructions for the agent only. Our summary lists: Python 3. Compatibility (from SKILL.md): Python 3.10+, Pillow, Matplotlib.
SKILL.md names 1 domain. As links in the text: aacrjournals.org. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
Cancer Research Figure Guide is published under the CC-BY-4.0 licence (declared in SKILL.md). It allows redistribution, so the full SKILL.md is shown on this page.
About 2.8k tokens (SKILL.md is roughly 11k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
Skills that share tags, products or a category with Cancer Research Figure Guide: Nature-Style Scientific Figures (Yuan1z0825/nature-skills, 47k stars), Citation Verification Guide (Galaxy-Dawn/claude-scholar, 5.7k stars), Citation Management (K-Dense-AI/claude-scientific-writer, 2.4k stars) and Academic Paper Composer (lishix520/academic-paper-skills, 1.4k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
jaechang-hits (a GitHub user) maintains it in jaechang-hits/SciAgent-Skills, which has 374 GitHub stars. The repository holds 169 skills in this directory. The repository was last updated on September 29, 2026.
Source: jaechang-hits/SciAgent-Skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.