Astropy
zLanqing/codex-claude-academic-skills
Comprehensive Python library for astronomy and astrophysics.
Agent skill
Limnology And Oceanography
by brycewang-stanford in brycewang-stanford/Awesome-Journal-Skills
A skill your agent uses when targeting Limnology and Oceanography or deciding whether an aquatic-sciences manuscript fits this venue.
Install Limnology And Oceanography
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill limnology-and-oceanography -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills limnology-and-oceanography --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanography .claude/skills/limnology-and-oceanography && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "limnology-and-oceanography" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanography into .claude/skills/limnology-and-oceanography/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "limnology-and-oceanography", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanographyType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill limnology-and-oceanography -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills limnology-and-oceanography --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .agents/skills && cp -r skills-src/Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanography .agents/skills/limnology-and-oceanography && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "limnology-and-oceanography" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanography into .agents/skills/limnology-and-oceanography/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "limnology-and-oceanography", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill limnology-and-oceanography -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills limnology-and-oceanography --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanography .cursor/skills/limnology-and-oceanography && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "limnology-and-oceanography" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanography into .cursor/skills/limnology-and-oceanography/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "limnology-and-oceanography", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/brycewang-stanford/Awesome-Journal-Skills.git --path Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanography--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill limnology-and-oceanography -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills limnology-and-oceanography --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanography .gemini/skills/limnology-and-oceanography && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "limnology-and-oceanography" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanography into .gemini/skills/limnology-and-oceanography/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "limnology-and-oceanography", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills limnology-and-oceanographyInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill limnology-and-oceanography -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .github/skills && cp -r skills-src/Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanography .github/skills/limnology-and-oceanography && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "limnology-and-oceanography" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanography into .github/skills/limnology-and-oceanography/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "limnology-and-oceanography", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill limnology-and-oceanography -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills limnology-and-oceanography --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanography .opencode/skills/limnology-and-oceanography && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "limnology-and-oceanography" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanography into .opencode/skills/limnology-and-oceanography/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "limnology-and-oceanography", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
Facts
- Skill name
limnology-and-oceanography- GitHub stars
- 1.2k
- Token cost
- ~2k tokens
- SKILL.md length
- 824 words
- Files
- 1
- Skills in repo
- 2,387
- Repo updated
- First seen
- Licence
- MIT
At a glance
A skill your agent uses when targeting Limnology and Oceanography or deciding whether an aquatic-sciences manuscript fits this venue.
- Targeting Limnology and Oceanography
- SKILL.md covers Journal positioning, When to trigger, Scope & topic fit and Method & evidence bar, plus 6 more sections
- Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md
- Deciding whether an aquatic-sciences manuscript fits this venue
What it does
Limnology And Oceanography is an agent skill from brycewang-stanford/Awesome-Journal-Skills. Use when targeting Limnology and Oceanography or deciding whether an aquatic-sciences manuscript fits this venue. Encodes the journal's fit, the aquatic-process-insight bar, biogeochemical and plankton/microbial evidence expectations, ASLO house style, official-submission re-check, and desk-reject heuristics.
Its SKILL.md is about 2k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
It sits in Research & Science, covering Physical and earth sciences. The repository describes itself as: Journal-specific Claude Code/Codex skill packs covering mainstream journals — AER, QJE, Nature, Cell, 管理世界, 经济研究 & 200+ more — your fast track to getting published. ｜ 覆盖主流期刊的… The licence is MIT.
When your agent uses it
- Targeting Limnology and Oceanography
- Deciding whether an aquatic-sciences manuscript fits this venue
Example prompts
- “/limnology-and-oceanography”
What it can do on your machine
Read from SKILL.md and the folder at commit 932eb23. It shows what the files ask for, not the result of running them.
Tool permissions
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Runs code
No scripts in the folder and no shell commands in SKILL.md.
From the folder's file list and the shell code blocks in SKILL.md.
Network
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Credentials
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Context cost
Limnology And Oceanography loads about 2k tokens when it runs. Until then it costs about 84 tokens; SKILL.md has 824 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
Safety
Auto-check passed
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
SKILL.md
The full file from brycewang-stanford/Awesome-Journal-Skills at commit 932eb23, republished under its MIT licence (© brycewang-stanford). 824 words, ~2,036 tokens.
Download SKILL.mdSave it as
.claude/skills/limnology-and-oceanography/SKILL.md (or your agent's skills folder).- name
- limnology-and-oceanography
- description
- Use when targeting Limnology and Oceanography or deciding whether an aquatic-sciences manuscript fits this venue. Encodes the journal's fit, the aquatic-process-insight bar, biogeochemical and plankton/microbial evidence expectations, ASLO house style, official-submission re-check, and desk-reject heuristics.
Limnology and Oceanography (limnology-and-oceanography)
Journal positioning
Limnology and Oceanography is the Association for the Sciences of Limnology and Oceanography (ASLO) flagship for the aquatic sciences, spanning freshwater (lakes, rivers, wetlands) and marine (coastal and open-ocean) systems within a single community. Its scope covers aquatic ecology, biogeochemistry, plankton and microbial processes, and the physical–biological and physical–chemical coupling that links them. Its defining expectation is rigorous aquatic-science evidence that delivers process insight — an advance in understanding how aquatic organisms, chemistry, and physics interact, not a descriptive survey or a single-system observation without mechanism. A terrestrial study, or a purely physical-oceanography paper with no biological or biogeochemical coupling (better suited to a geophysics venue), is a poor fit however competent. This skill is a fit / venue-selection / re-framing tool. It does not replace the journal's current author guidance. Before submitting, re-check the live Limnology and Oceanography author instructions and data policy.
When to trigger
- The author names Limnology and Oceanography and wants a fit/framing check for a freshwater or marine aquatic-science paper.
- An aquatic ecology, biogeochemistry, or plankton/microbial study must be re-framed around its process insight and physical–biological coupling, or recognized as out of scope.
- The author is choosing between this journal,
global-biogeochemical-cycles,global-change-biology, and a hydrology or geophysics venue. - The author needs the journal's aquatic-process and measurement expectations across the limnology–oceanography continuum.
Scope & topic fit
- Aquatic ecology and community/food-web processes in lakes, rivers, estuaries, coastal seas, and the open ocean, including trophic interactions and population dynamics.
- Aquatic biogeochemistry: carbon, nutrient (N, P, Si, Fe), oxygen, and trace-element cycling, and the controls on productivity, respiration, and elemental stoichiometry.
- Plankton, microbial, and viral processes: physiology, diversity–function links, blooms, and microbial loop dynamics with quantitative rate measurements.
- Physical–biological and physical–chemical coupling: mixing, stratification, transport, and light fields as controls on biological and chemical distributions.
- Biological–chemical responses to environmental change (warming, deoxygenation, acidification, eutrophication) when an aquatic process mechanism is central.
- Methods and approaches that enable new quantitative insight into aquatic processes, when validated and broadly useful.
Method & evidence bar
- The contribution must rest on a quantitative aquatic-science process, not a descriptive inventory or a single-station snapshot without mechanism.
- Rate and flux measurements (productivity, respiration, nutrient uptake, grazing, remineralization) need stated methods, controls, calibration, and uncertainty.
- Field sampling must address spatial/temporal representativeness, mixing depth and stratification context, and confounding water-mass or seasonal effects.
- Experimental and incubation studies need adequate replication, appropriate controls, and honest treatment of bottle/enclosure artifacts and scaling to the natural system.
- Coupled physical–biological claims must support the linkage with data or a validated model, not assert correlation as mechanism.
- Data should be deposited or available per ASLO/journal policy, with relevant oceanographic/limnological metadata and cruise or site documentation.
Show full SKILL.md (381 more words)Show less
Structure & house style
- Standard research-article structure (Introduction, Methods, Results, Discussion); re-check current article types and length on the live guide.
- The introduction must establish the aquatic-process gap and why the system or mechanism matters across the limnology–oceanography community, not only to one basin or lake.
- Figures should be quantitative and load-bearing: depth/section profiles, rate measurements, time series, and process or coupling diagrams with uncertainty shown.
- An informative abstract stating results and their process significance is expected; re-check current abstract and formatting requirements on the live guide.
- Methods, station/cruise metadata, and data-availability statements must let a reader assess representativeness and reproduce the central rate or flux estimate.
Official-submission checklist
- Before giving submission-ready advice, read
../../resources/source-basis.mdand../../resources/official-source-map.md; start from the ASLO/publisher anchors, then cite the current Limnology and Oceanography page you checked. - Search the live site for "Limnology and Oceanography author guidelines" / "ASLO journals" and follow the current version.
- Re-check article types (including any letters/short-form and methods options), abstract format, and length/figure expectations.
- Confirm the data-availability and metadata-deposition policy and any community-database expectations for oceanographic/limnological data.
- Re-check competing-interests, funding, author-contribution, and AI-use disclosure, and open-access options.
- If the live official instructions conflict with this skill, the official instructions win.
Pre-submission self-check
- The central contribution is an aquatic-science process insight, not a descriptive survey.
- Rate/flux measurements report methods, controls, calibration, and uncertainty.
- Sampling representativeness and stratification/water-mass context are addressed.
- Incubation/experimental work is replicated, controlled, and honest about enclosure artifacts.
- Physical–biological coupling is supported by data or a validated model, not asserted.
- Data, metadata, and cruise/site documentation meet current availability requirements.
Common desk-reject triggers
- A terrestrial study, or one with no aquatic-process component, submitted to an aquatic-sciences venue.
- A purely physical-oceanography paper with no biological/biogeochemical coupling (better for a geophysics venue).
- A descriptive species or chemistry inventory with no mechanism, rate, or process insight.
- Single-station or single-date sampling presented as representative without mixing/seasonal context.
- Incubation results scaled to the ecosystem with no acknowledgment of bottle/enclosure artifacts.
- Missing data-availability statement, metadata, or cruise/site documentation.
Re-routing decision
- Large-scale ocean/inland-water carbon or nutrient cycling is the dominant framing →
global-biogeochemical-cycles. - Climate-change biology of aquatic ecosystems is dominant →
global-change-biology. - Catchment hydrology / inland-water flow process dominant →
journal-of-hydrologyorwater-resources-research. - Purely physical-oceanography / circulation dynamics → a geophysics venue such as
nature-geoscience. - Population/evolutionary mechanism in aquatic taxa →
functional-ecology,ecology-letters, ormolecular-ecology.
Output format
[Fit] High / Medium / Low (one-line reason)
[Target] Limnology and Oceanography
[System] <freshwater / marine / coastal / estuarine>
[Topic tags] <2–3 closest aquatic-science topics>
[Process insight] <the aquatic ecological / biogeochemical / coupling mechanism advanced>
[Method/evidence] <do rates + representativeness + coupling support clear the bar?>
[Top risk] <the single most likely reason for rejection>
[Official items to re-check] <article type / abstract / data & metadata policy / disclosures>
[Re-route suggestion] <if not a fit, a better-matched venue>© brycewang-stanford, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
Files
Just SKILL.md in Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanography of brycewang-stanford/Awesome-Journal-Skills.
Open the folder on GitHubat commit 932eb23
Compare with similar skills
Limnology And Oceanography next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Limnology And Oceanography this skillbrycewang-stanford/Awesome-Journal-Skills | 1.2k | — | ~2k | Automated safety check: Pass | MIT | |
| AstropyzLanqing/codex-claude-academic-skills | 4.7k | 13 repos | ~2.9k | Automated safety check: Pass | BSD-3-Clause | |
| PymatgenzLanqing/codex-claude-academic-skills | 4.7k | 11 repos | ~5k | Automated safety check: Pass | MIT | |
| Cantera Ignition DelayK-Dense-AI/scientific-agent-skills | 48k | 1 repos | ~2.2k | Automated safety check: Pass | MIT | |
| Weathertrpc-group/trpc-agent-go | 1.9k | 8 repos | ~591 | Automated safety check: Pass | Apache-2.0 | |
| Pymol VisualizationChatMol/ChatMol | 373 | — | ~1.2k | Automated safety check: Pass | MIT |
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Review
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Categories
Questions about Limnology And Oceanography
What does Limnology And Oceanography do?
A skill your agent uses when targeting Limnology and Oceanography or deciding whether an aquatic-sciences manuscript fits this venue. Limnology And Oceanography is an agent skill from brycewang-stanford/Awesome-Journal-Skills. Use when targeting Limnology and Oceanography or deciding whether an aquatic-sciences manuscript fits this venue.
When should I use Limnology And Oceanography?
Limnology And Oceanography fits situations like: targeting Limnology and Oceanography; deciding whether an aquatic-sciences manuscript fits this venue.
How do I install Limnology And Oceanography in Claude Code?
Run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill limnology-and-oceanography -a claude-code`. Or copy the skill folder (Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanography in brycewang-stanford/Awesome-Journal-Skills) into .claude/skills/limnology-and-oceanography in your project. Claude Code loads it when a task matches its description.
How do I install Limnology And Oceanography in Codex?
Run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill limnology-and-oceanography -a codex`. Or copy the skill folder (Agriculture-Environment-Journal-Skills/skills/limnology-and-oceanography in brycewang-stanford/Awesome-Journal-Skills) into .agents/skills/limnology-and-oceanography in your project. Codex loads it when a task matches its description.
Can I use Limnology And Oceanography in Cursor, Gemini CLI or GitHub Copilot?
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill limnology-and-oceanography -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/limnology-and-oceanography, .gemini/skills/limnology-and-oceanography, .github/skills/limnology-and-oceanography and .opencode/skills/limnology-and-oceanography in your project.
What does Limnology And Oceanography need to run?
SKILL.md names no scripts, command-line tools or credentials: Limnology And Oceanography is instructions for the agent only.
Does Limnology And Oceanography access the network?
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Is Limnology And Oceanography safe to install?
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
What licence does Limnology And Oceanography use?
Limnology And Oceanography is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
How many tokens does Limnology And Oceanography use?
About 2k tokens (SKILL.md is roughly 8.1k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
What are the alternatives to Limnology And Oceanography?
Skills that share tags, products or a category with Limnology And Oceanography: Astropy (zLanqing/codex-claude-academic-skills, 4.7k stars), Pymatgen (zLanqing/codex-claude-academic-skills, 4.7k stars), Cantera Ignition Delay (K-Dense-AI/scientific-agent-skills, 48k stars) and Weather (trpc-group/trpc-agent-go, 1.9k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
Who maintains Limnology And Oceanography?
brycewang-stanford (a GitHub user) maintains it in brycewang-stanford/Awesome-Journal-Skills, which has 1,231 GitHub stars. The repository holds 2,387 skills in this directory. The repository was last updated on September 27, 2026.
Source: brycewang-stanford/Awesome-Journal-Skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.