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UniProt · Protein structure and design
Skills
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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | Retrieve and analyze AlphaFold predicted structures for a protein. | google-deepmind/ | 3.2k | 2 repos | ~1.2k | Automated safety check: Pass | Apache-2.0 | yesterday |
| 2 | Query public biology databases and APIs including UniProt, RCSB PDB, AlphaFold DB, ClinVar, dbSNP, gnomAD, Ensembl, GEO, InterPro, KEGG, OpenTargets, Reactome, and STRING. | DrugClaw/ | 126 | — | ~1.4k | Automated safety check: Pass | Apache-2.0 | 6 mo ago |
| 3 | 3.Gget CLI/Python toolkit for rapid bioinformatics queries. An agent skill from davila7/claude-code-templates. | davila7/ | 33k | 10 repos | ~6.3k | Automated safety check: Pass | MIT | today |
| 4 | Access AlphaFold's 200M+ AI-predicted protein structures. An agent skill from davila7/claude-code-templates. | davila7/ | 33k | 10 repos | ~4k | Automated safety check: Pass | MIT | today |
| 5 | Access protein metadata, function, taxonomy, and sequences across UniProtKB, UniParc, and UniRef. | google-deepmind/ | 3.2k | 1 repo | ~3.1k | Automated safety check: Pass | Apache-2.0 | yesterday |
| 6 | A skill your agent uses when working with scientific research tools and workflows across bioinformatics, cheminformatics, genomics, structural biology, proteomics, and drug discovery. | ynulihao/ | 618 | 2 repos | ~2.5k | Automated safety check: Pass | No licence | 7 mo ago |
| 7 | Performs 3D structural searches of proteins against various databases (PDB, AlphaFold, CATH, MGnify, etc.) using the Foldseek API. | google-deepmind/ | 3.2k | 1 repo | ~1.3k | Automated safety check: Pass | Apache-2.0 | yesterday |
| 8 | 8.Pdb Fetch and analyze protein structures from RCSB PDB. An agent skill from adaptyvbio/protein-design-skills. | adaptyvbio/ | 164 | 3 repos | ~1.4k | Automated safety check: Pass | MIT | 4 mo ago |
| 9 | 9.Uniprot Access UniProt for protein sequence and annotation retrieval. | adaptyvbio/ | 164 | 2 repos | ~1.3k | Automated safety check: Pass | MIT | 4 mo ago |
| 10 | Retrieves protein structure data from RCSB PDB, PDBe, and AlphaFold with protein disambiguation, quality assessment, and comprehensive structural profiles. | wu-yc/ | 1.1k | 2 repos | ~2.8k | Automated safety check: Pass | No licence | 6 mo ago |
| 11 | Access and analyze AlphaFold protein structure predictions. An agent skill from FreedomIntelligence/OpenClaw-Medical-Skills. | FreedomIntelligence/ | 3.1k | 1 repo | ~2.1k | Automated safety check: Pass | No licence | 2 mo ago |
| 12 | 12.Alphafold DB Access over 200M protein structures from AlphaFold DB; use when you need to retrieve predicted 3D structures (PDB/mmCIF), confidence metrics (pLDDT/PAE), or protein metadata by UniProt accession. | aipoch/ | 1.9k | — | ~606 | Automated safety check: Pass | MIT | 24 days ago |
| 13 | 13.Gget Unified CLI/Python interface for querying genomic, proteomic, structure, and expression data across 20+ bioinformatics databases; use when you need fast, scriptable retrieval by gene/protein IDs or… | aipoch/ | 1.9k | — | ~816 | Automated safety check: Pass | MIT | 24 days ago |
| 14 | Retrieves and interprets AlphaFold Protein Structure Database (AFDB) models by UniProt accession, reading pLDDT and PAE confidence correctly. | GPTomics/ | 1.2k | 1 repo | ~4k | Automated safety check: Pass | MIT | 1 mo ago |
| 15 | Navigate the Bio.PDB SMCRA hierarchy (Structure-Model-Chain-Residue-Atom) safely, surfacing the heterogeneity it hides by default. | GPTomics/ | 1.2k | 1 repo | ~3.7k | Automated safety check: Pass | MIT | 1 mo ago |
| 16 | Access AlphaFold DB's 200M+ predicted structures by UniProt ID. | jaechang-hits/ | 374 | 1 repo | ~4.1k | Automated safety check: Pass | CC-BY-4.0 | 12 days ago |
| 17 | Query IUPHAR/BPS Guide to Pharmacology (GtoPdb) for receptor-ligand interactions, target/ligand metadata, families, and approved drugs. | jaechang-hits/ | 374 | 1 repo | ~4.9k | Automated safety check: Pass | Unknown | 12 days ago |
| 18 | Query UniProt REST API: search by gene/protein name, fetch FASTA, map IDs (Ensembl, PDB, RefSeq), access Swiss-Prot annotations. | jaechang-hits/ | 374 | 1 repo | ~3.4k | Automated safety check: Pass | CC-BY-4.0 | 12 days ago |
| 19 | Query AlphaFold protein structure predictions by UniProt accession | wentorai/ | 298 | 1 repo | ~2k | Automated safety check: Pass | MIT | 3 mo ago |
| 20 | Retrieve protein sequences and functional information from UniProt database by protein name, enabling protein analysis and bioinformatics workflows. | InternScience/ | 170 | 1 repo | ~2k | Automated safety check: Pass | MIT | 4 mo ago |
| 21 | 21.Pdb Database Query RCSB PDB (200K+ structures) via the public REST + GraphQL APIs with plain requests (no SDK). | jaechang-hits/ | 374 | 1 repo | ~7.7k | Automated safety check: Pass | BSD-3-Clause | 12 days ago |
| 22 | ToolUniverse workflow — Protein Structure Retrieval. An agent skill from lamm-mit/scienceclaw. | lamm-mit/ | 246 | — | ~2.8k | Automated safety check: Pass | Apache-2.0 | 1 mo ago |
| 23 | 23.Uniprot Protein sequence, function, and annotation lookup. An agent skill from lamm-mit/scienceclaw. | lamm-mit/ | 246 | — | ~1.2k | Automated safety check: Pass | Apache-2.0 | 1 mo ago |