Machine learning

A skill your agent uses when selecting predictive genes or other molecular features from bulk expression matrices for binary case-vs-control classification with elastic net logistic regression…

aipoch/medical-research-skills

A skill your agent uses when validating an existing prognostic risk signature on an external bulk expression cohort with survival outcomes, producing risk scores, Kaplan-Meier curves, risk…

aipoch/medical-research-skills

A skill your agent uses when building a binary classification model from an expression matrix or other omics feature matrix with LASSO logistic regression, cross-validation, and coefficient path…

aipoch/medical-research-skills

A skill your agent uses when training a LightGBM model on tabular data in R and returning model metrics, feature importance ranking tables, and feature importance plots.

aipoch/medical-research-skills

A skill your agent uses when performing PCA principal component dimensionality reduction on tabular numeric data.

aipoch/medical-research-skills

A skill your agent uses when you need a standardized R CLI workflow to train a two-class random forest model from an expression-like feature matrix, rank variable importance, and generate…

aipoch/medical-research-skills

A skill your agent uses when running prognostic survival analysis on a clinical cohort with time-to-event data to estimate univariate and multivariable Cox proportional hazards models, export result…

aipoch/medical-research-skills

A skill your agent uses when building XGBoost models on tabular data and returning feature importance ranking outputs.

aipoch/medical-research-skills

Launch, monitor, and manually clean up an eval job on Marin's Iris TPU or CoreWeave H100x8 GPU cluster via the OpenThoughts-Agent entrypoint.

open-thoughts/OpenThoughts-Agent

Launch SFT via python -m hpc.launch --jobtype sft on any cluster (JSC Jupiter GH200, CINECA Leonardo A100, TACC Vista GH200), with EITHER backend — LLaMA-Factory (default) or axolotl (--sftbackend…

open-thoughts/OpenThoughts-Agent

Predicts absorption, distribution, metabolism, excretion and toxicity for drug candidates with ADMETlab 3.0, ADMET-AI, DeepChem and chemprop, plus druglikeness filters.

GPTomics/bioSkills

Load and preprocess imaging mass cytometry (IMC) and MIBI data from raw MCD/TXT through hot-pixel removal, spillover compensation, and variance-stabilizing transformation, covering readimc/steinbock…

GPTomics/bioSkills

Maps query single-cell data onto reference atlases and transfers cell-type labels using scArches surgery (scVI/scANVI), Symphony, Azimuth, CellTypist, scPoli, popV, and foundation models, with…

GPTomics/bioSkills

Selects biomarker features from high-dimensional omics data using Boruta all-relevant selection, mRMR, LASSO/elastic-net, and stability selection, while controlling the leakage, irreproducibility…

GPTomics/bioSkills

Validates predictive models on omics and biomedical data with nested cross-validation, group/batch/temporal-aware splits, the full data-leakage taxonomy, probability calibration, decision-curve net…

GPTomics/bioSkills

Builds diagnostic and prognostic classifiers on omics feature matrices with regularized logistic regression, random forest, and gradient-boosted trees, handling the pn regime, batch shortcut…

GPTomics/bioSkills

Explains ML predictions on omics data with SHAP, LIME, and permutation importance, handling the correlated-feature trap, the conditional-vs-interventional Shapley choice, and the…

GPTomics/bioSkills

Builds and validates predictive time-to-event models on clinical and omics data with penalized Cox, random survival forests, gradient-boosted and deep survival models, and prediction-grade…

GPTomics/bioSkills

Computes DNA methylation age (DNAm age) and pace of aging by applying frozen elastic-net epigenetic clocks to a clean beta matrix with methylclock, dnaMethyAge, or methylCIPHER.

GPTomics/bioSkills

Builds supervised and unsupervised multivariate integration across bulk omics blocks with mixOmics - sPLS for sparse pairwise correlation, DIABLO (block.splsda) for a multi-block discriminant…

GPTomics/bioSkills

Infers directed, time-delayed gene regulatory edges from BULK time-series expression using Granger causality (statsmodels VAR F-test), dynGENIE3 (tree ensembles regressing ODE-derived derivatives…

GPTomics/bioSkills

End-to-end biomarker discovery workflow from expression data to validated biomarker panels.

GPTomics/bioSkills

Train ML models on Databricks. An agent skill from databricks/databricks-agent-skills.

databricks/databricks-agent-skills

Build this skill enables AI assistant to provide interpretability and explainability for machine learning models.

jeremylongshore/tons-of-skills-marketplace

Process split datasets into training, validation, and testing sets for ML model development.

jeremylongshore/tons-of-skills-marketplace

Build train machine learning models with automated workflows.

jeremylongshore/tons-of-skills-marketplace

Optimize machine learning model hyperparameters using grid search, random search, or Bayesian optimization.

jeremylongshore/tons-of-skills-marketplace

Build automated machine learning pipelines with feature engineering, model selection, and hyperparameter tuning.

jeremylongshore/tons-of-skills-marketplace

Build and evaluate classification models for supervised learning tasks with labeled data.

jeremylongshore/tons-of-skills-marketplace

Deploy this skill enables AI assistant to deploy machine learning models to production environments.

jeremylongshore/tons-of-skills-marketplace

Execute create, select, and transform features to improve machine learning model performance.

jeremylongshore/tons-of-skills-marketplace

Build this skill allows AI assistant to evaluate machine learning models using a comprehensive suite of metrics.

jeremylongshore/tons-of-skills-marketplace

Execute this skill empowers AI assistant to perform regression analysis and modeling using the regression-analysis-tool plugin.

jeremylongshore/tons-of-skills-marketplace

Implement machine learning experiment tracking using MLflow or Weights & Biases.

jeremylongshore/tons-of-skills-marketplace

Build this skill enables AI assistant to track and manage ai/ml model versions using the model-versioning-tracker plugin.

jeremylongshore/tons-of-skills-marketplace

Validate AI/ML models and datasets for bias, fairness, and ethical concerns.

jeremylongshore/tons-of-skills-marketplace

Consensus cell type annotation: runs 10+ algorithms (KNN-Harmony/BBKNN/Scanorama/scVI, CellTypist, ONCLASS, Random Forest, SCANVI, SVM, XGBoost) on a labeled reference and transfers labels via…

jaechang-hits/SciAgent-Skills

This skill covers causal machine learning methods in applied economics and quantitative social science.

brycewang-stanford/Auto-Empirical-Research-Skills

Econometrics skill for OLS regression and linear models. An agent skill from brycewang-stanford/Auto-Empirical-Research-Skills.

brycewang-stanford/Auto-Empirical-Research-Skills

Econometrics skill for machine learning methods in causal inference.

brycewang-stanford/Auto-Empirical-Research-Skills

Literature and web research for an ML methodology concern (EDA extra measurements, leakage, transforms, feature engineering, learner family), or an EDA extra-analysis survey from JOURNAL plus…

probabl-ai/skills

Guide Claude through ingesting TCGA sample sheets, expression archives, and clinical carts into omicverse, initialising survival metadata, and exporting annotated AnnData files.

FreedomIntelligence/OpenClaw-Medical-Skills

Pose classification using ST-GCN (Spatial Temporal Graph Convolutional Network).

NVIDIA/skills

Generate single-file HTML visual explanations for learning and review.

mingchen666/Reviva

Apple HIG guidance for Apple technology integrations: Siri, Apple Pay, HealthKit, HomeKit, ARKit, machine learning, generative AI, iCloud, Sign in with Apple, SharePlay, CarPlay, Game Center, in-app…

raintree-technology/hig-doctor

A skill your agent uses to classify tabular data end-to-end in MATLAB — load a dataset, prepare and clean it, select promising classifiers, train them, and compare accuracies with cross-validation…

matlab/matlab-agentic-toolkit

Parallel multi-AI cross-validation research workflow (大版本). An agent skill from majiayu000/spellbook.

majiayu000/spellbook

Meta Quest Passthrough Camera Access (PCA) for Unity — access the forward-facing RGB cameras on Quest 3 / Quest 3S to feed Computer Vision and Machine Learning pipelines.

meta-quest/agentic-tools