Research & Science · InternScience/scp

Calculate atmospheric parameters including Coriolis parameter, geostrophic wind, heat index, potential temperature, and dewpoint for meteorology and climate science.

InternScience/scp

Search ChEMBL database for molecule information by name to retrieve bioactivity data and chemical structures.

InternScience/scp

Predict protein-ligand binding affinity using Boltz-2 model to assess molecular interactions and binding probability for drug discovery.

InternScience/scp

Analyze chemical structures from compound names to retrieve SMILES, molecular formulas, molecular weight, and LogP values.

InternScience/scp

Retrieve SMILES strings from PubChem database using compound names to obtain molecular structures from common chemical names.

InternScience/scp

Comprehensive protein analysis combining InterProScan domain identification with BLAST similarity search to provide complete functional and evolutionary annotation.

InternScience/scp

Use ESMFold model to predict 3D structure of the input protein sequence.

InternScience/scp

Given a protein sequence and its structure, employ ProSST model to predict mutation effects and obtain the top-k mutated sequences.

InternScience/scp

Comprehensive drug screening pipeline from molecular filtering through QED/ADMET criteria to protein-ligand docking, identifying promising drug candidates.

InternScience/scp

Predict the ADMET (absorption, distribution, metabolism, excretion, and toxicity) properties of the input molecules.

InternScience/scp

Retrieve SMILES strings from PubChem using compound names. An agent skill from InternScience/scp.

InternScience/scp

Check if the input protein sequence or molecule SMILES string is valid.

InternScience/scp

Compute the drug-likeness metrics (QED score and Number of violations of Lipinski's Rule of Five) of the input candidate molecules (SMILES format).

InternScience/scp

Calculate different types of molecular properties based on SMILES strings, covering basic physicochemical properties, hydrophobicity, hydrogen bonding capability, molecular complexity, topological…

InternScience/scp

Compute the Tanimoto similarities between a target molecule and a list of candidate molecules using Morgan fingerprints.

InternScience/scp

Search the protein information from the input gene name and downloads the optimal PDB or AlphaFold structures.

InternScience/scp

Retrieve genomic sequences from Ensembl database using transcript or gene IDs to obtain nucleotide and protein sequences.

InternScience/scp

Analyze protein sequences using InterProScan to identify functional domains, protein families, and Gene Ontology (GO) annotations.

InternScience/scp

Perform meta-analysis on scientific studies to synthesize research findings and generate comprehensive reports with statistical summaries.

InternScience/scp

Calculate advanced molecular descriptors including shape indices, connectivity indices, and structural features for QSAR and drug discovery.

InternScience/scp

Convert between molecular formats including SMILES, InChI, InChIKey, and SELFIES for cheminformatics applications.

InternScience/scp

Calculate basic molecular properties from SMILES including molecular weight, formula, atom counts, and exact mass.

InternScience/scp

Search for similar molecules using Tanimoto similarity with Morgan fingerprints to identify structurally related compounds.

InternScience/scp

Retrieve gene information from NCBI Gene database by gene IDs to obtain genomic details, function, and expression data.

InternScience/scp

Calculate seawater thermodynamic properties using TEOS-10 standard including density, salinity, sound speed, and freezing temperature for oceanography.

InternScience/scp

Search for similar protein sequences in UniProt Swiss-Prot database using BLAST to identify homologous proteins and functional relationships.

InternScience/scp

Search PubChem database using SMILES strings to retrieve compound information and chemical properties.

InternScience/scp

Search PubMed database for scientific articles and publications to retrieve biomedical literature.

InternScience/scp

Query IGVF Catalog for regulatory element–gene associations within a genomic region, including association scores, element types, and biosample context.

InternScience/scp

Search scientific literature and research papers using FlowSearch to find relevant academic articles and publications.

InternScience/scp

Convert SMILES strings to CAS registry numbers using material informatics tools to identify chemical substances.

InternScience/scp

Retrieve gene expression data from TCGA (The Cancer Genome Atlas) to analyze cancer-specific expression patterns.

InternScience/scp

Retrieve protein sequences and functional information from UniProt database by protein name, enabling protein analysis and bioinformatics workflows.

InternScience/scp

Convert physical quantities and units at nanoscale for materials science and nanotechnology applications.

InternScience/scp

Query dbSNP + NCBI Gene to get variant genomic position (chromosome, coordinates, ref/alt alleles, mutation type) and associated gene coordinates.

InternScience/scp

Assess wind energy potential and perform site analysis using atmospheric science calculations.

InternScience/scp

Query NCBI ClinVar for variant clinical pathogenicity classification (Pathogenic/Benign/VUS), review status and associated diseases.

InternScience/scp