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Research & Science · aipoch/medical-research-skills
Skills
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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 97 | A skill your agent uses when building a weighted gene co-expression network from a bulk expression matrix and a sample group file, filtering variable genes by MAD, identifying co-expression modules… | aipoch/ | 1.9k | — | ~2.9k | Automated safety check: Pass | MIT | 24 days ago |
| 98 | A skill your agent uses when interpreting scientific graphs and charts, explaining data visualizations for research presentations, writing figure captions for publications, or analyzing trends in… | aipoch/ | 1.9k | — | ~3.4k | Automated safety check: Pass | MIT | 24 days ago |
| 99 | Generates a PROSPERO-compliant Meta-analysis protocol based on Title and PICOS. | aipoch/ | 1.9k | — | ~1.5k | Automated safety check: Pass | MIT | 24 days ago |
| 100 | A skill your agent uses when finding open access journals, checking journal policies, or identifying predatory publishers. | aipoch/ | 1.9k | — | ~1.8k | Automated safety check: Pass | MIT | 24 days ago |
| 101 | Refines long medical academic texts into SCI-style unstructured Chinese and English abstracts; use when you need to condense drafts/reports/summaries into bilingual abstracts and generate… | aipoch/ | 1.9k | — | ~1.5k | Automated safety check: Pass | MIT | 24 days ago |
| 102 | 102.Adaptyv Cloud laboratory platform for automated protein testing and validation; use when you have designed protein sequences and need wet-lab experimental validation (e.g., binding, expression… | aipoch/ | 1.9k | — | ~3.1k | Automated safety check: Notes | MIT | 24 days ago |
| 103 | 103.Bibliography Classifies and organizes literature by theme, method, and conclusion; use when you need to batch-read a folder of PDF/MD/DOCX/TXT files and output a structured CSV for literature reviews and… | aipoch/ | 1.9k | — | ~1.6k | Automated safety check: Pass | MIT | 24 days ago |
| 104 | Bioinformatics literature analysis workflow extraction and customized plan design. | aipoch/ | 1.9k | — | ~2.6k | Automated safety check: Pass | MIT | 24 days ago |
| 105 | Generates structured biomedical outlines for review articles, discussion sections, and thesis proposals. | aipoch/ | 1.9k | — | ~1.5k | Automated safety check: Pass | MIT | 24 days ago |
| 106 | 106.Cellosaurus API Access Cellosaurus database for cell line information and release data. | aipoch/ | 1.9k | — | ~1.7k | Automated safety check: Pass | MIT | 24 days ago |
| 107 | A skill your agent uses when refactoring research code for publication, adding documentation to existing analysis scripts, creating reproducible computational workflows, or preparing code for… | aipoch/ | 1.9k | — | ~3.1k | Automated safety check: Pass | MIT | 24 days ago |
| 108 | Access CrossRef metadata for scholarly works; use when you need to resolve a DOI or search CrossRef to retrieve bibliographic details, citation/reference counts, or funder information for research… | aipoch/ | 1.9k | — | ~1.5k | Automated safety check: Pass | MIT | 24 days ago |
| 109 | 109.Deeptools NGS analysis toolkit. An agent skill from aipoch/medical-research-skills. | aipoch/ | 1.9k | — | ~3.6k | Automated safety check: Pass | MIT | 24 days ago |
| 110 | 110.Encori API Access ENCORI (StarBase) database for miRNA-target, RNA-RNA, and other regulatory data. | aipoch/ | 1.9k | — | ~2k | Automated safety check: Pass | MIT | 24 days ago |
| 111 | Compare experimental method details between two Zotero PDF papers, identify protocol differences (ratios, dosages, timing, conditions), search supporting literature to explain why they differ, and… | aipoch/ | 1.9k | — | ~3.3k | Automated safety check: Notes | MIT | 24 days ago |
| 112 | A skill your agent uses when analyzing FASTQC quality reports from sequencing data, identifying quality issues in NGS datasets, or troubleshooting sequencing problems. | aipoch/ | 1.9k | — | ~2.1k | Automated safety check: Pass | MIT | 24 days ago |
| 113 | 113.Gene Info Retrieves comprehensive gene information including PubMed publication counts, NCBI summaries, and Ensembl transcript data. | aipoch/ | 1.9k | — | ~2.3k | Automated safety check: Pass | MIT | 24 days ago |
| 114 | 114.Gokegg Analysis A skill your agent uses when performing GO and KEGG enrichment on a gene list from bulk RNA-seq or microarray studies, then generating a combined GO/KEGG dot chart. | aipoch/ | 1.9k | — | ~2.7k | Automated safety check: Pass | MIT | 24 days ago |
| 115 | Converts LabArchives notebook data, entry metadata, and authorized ELN exports into manuscript-ready academic writing outputs such as Methods sections, data-availability statements, reproducibility… | aipoch/ | 1.9k | — | ~1.7k | Automated safety check: Pass | MIT | 24 days ago |
| 116 | Filter literature by publication year, journal, and predefined screening rules to produce inclusion/exclusion lists; use when conducting preliminary screening or systematic review screening to… | aipoch/ | 1.9k | — | ~2.3k | Automated safety check: Pass | MIT | 24 days ago |
| 117 | Generates a patient-friendly medical case report tweet from case images and disease name. | aipoch/ | 1.9k | — | ~2k | Automated safety check: Pass | MIT | 24 days ago |
| 118 | A multi-stage workflow for writing long-form medical reviews; used when the user needs to build an outline based on PubMed literature, write chapter by chapter, perform supplementary searches, and… | aipoch/ | 1.9k | — | ~2.7k | Automated safety check: Pass | MIT | 24 days ago |
| 119 | Vector database retrieval and evidence-based answering for medical research topics. | aipoch/ | 1.9k | — | ~2k | Automated safety check: Pass | MIT | 24 days ago |
| 120 | Generates scientifically sound inclusion and exclusion criteria for Meta-Analysis based on a given title or keywords. | aipoch/ | 1.9k | — | ~1.9k | Automated safety check: Pass | MIT | 24 days ago |
| 121 | Analyzes the feasibility of a proposed Meta-analysis topic by searching for existing Meta-analyses and Clinical Trials on PubMed/ClinicalTrials.gov. | aipoch/ | 1.9k | — | ~1.5k | Automated safety check: Pass | MIT | 24 days ago |
| 122 | Generates PI(E)COS structure (Population, Intervention, Comparator, Outcomes, Study Design) from Meta-analysis or study titles. | aipoch/ | 1.9k | — | ~1.9k | Automated safety check: Pass | MIT | 24 days ago |
| 123 | Analyzes forest plots for meta-analysis, generating detailed descriptions and formatting figure legends in Chinese or English. | aipoch/ | 1.9k | — | ~1.9k | Automated safety check: Pass | MIT | 24 days ago |
| 124 | Generates the "Risk of Bias" results section for a meta-analysis based on assessment tables and statistics. | aipoch/ | 1.9k | — | ~2k | Automated safety check: Pass | MIT | 24 days ago |
| 125 | Generates the "Results" section for meta-analysis sensitivity analysis based on statistical tables and titles. | aipoch/ | 1.9k | — | ~1.9k | Automated safety check: Pass | MIT | 24 days ago |
| 126 | Generates comprehensive academic introductions for biological pathways, including signaling processes, markers, and inhibitors. | aipoch/ | 1.9k | — | ~1.8k | Automated safety check: Pass | MIT | 24 days ago |
| 127 | 127.Peer Review Conduct professional peer reviews for papers or theses, providing structured evaluations and improvement suggestions; use when you need a pre-submission assessment, an internal review, or academic… | aipoch/ | 1.9k | — | ~1.4k | Automated safety check: Pass | MIT | 24 days ago |
| 128 | Comprehensive reproducibility tool — audit Methods completeness for replication AND promote open science best practices (pre-registration, FAIR data, code sharing, replication design, reporting… | aipoch/ | 1.9k | — | ~3.4k | Automated safety check: Pass | MIT | 24 days ago |
| 129 | Generates a weekly academic literature report based on keywords using PubMed. | aipoch/ | 1.9k | — | ~1.9k | Automated safety check: Pass | MIT | 24 days ago |
| 130 | 130.Response Letter Helps organize reviewer comments and generate a standardized Word (.docx) response letter that maps each change to its exact location (page/paragraph/line). | aipoch/ | 1.9k | — | ~2.1k | Automated safety check: Pass | MIT | 24 days ago |
| 131 | 131.Scanpy Standard single-cell RNA-seq analysis pipeline. An agent skill from aipoch/medical-research-skills. | aipoch/ | 1.9k | — | ~3.9k | Automated safety check: Pass | MIT | 24 days ago |
| 132 | Generates science popularization articles with titles and outlines based on medical topics and style preferences. | aipoch/ | 1.9k | — | ~1.8k | Automated safety check: Pass | MIT | 24 days ago |
| 133 | 133.Scite Database Access Scite.ai Smart Citations to classify how a paper is cited (supporting, contrasting, mentioning) and assess scientific claims; use it when you need to evaluate a paper’s reliability or its… | aipoch/ | 1.9k | — | ~1.4k | Automated safety check: Pass | MIT | 24 days ago |
| 134 | 134.Treatment Plans Generate concise (typically 1–4 pages) patient-centered medical treatment plans in LaTeX/PDF when a clinician needs an actionable plan with SMART goals, evidence-based interventions, monitoring, and… | aipoch/ | 1.9k | — | ~2k | Automated safety check: Pass | MIT | 24 days ago |
| 135 | 135.Scvi Tools Deep generative models for single-cell omics; use when you need probabilistic batch correction (scVI), transfer learning, uncertainty-aware differential expression, or multimodal integration… | aipoch/ | 1.9k | — | ~1.5k | Automated safety check: Pass | MIT | 24 days ago |
| 136 | Transform lengthy academic papers into concise, structured 250-word abstracts. | aipoch/ | 1.9k | — | ~3k | Automated safety check: Pass | MIT | 24 days ago |
| 137 | 137.Abstract Trimmer Precision editing tool that reduces abstract word count through intelligent compression techniques, maintaining scientific rigor while meeting strict journal and conference requirements. | aipoch/ | 1.9k | — | ~2.6k | Automated safety check: Pass | MIT | 24 days ago |
| 138 | 138.Acronym Unpacker Intelligent medical abbreviation disambiguation tool that resolves ambiguous acronyms using clinical context, specialty-specific knowledge, and document-level semantic analysis. | aipoch/ | 1.9k | — | ~2.4k | Automated safety check: Pass | MIT | 24 days ago |
| 139 | Generates CIOMS I-compliant ICSR narratives from adverse event case data for FDA and EMA regulatory submission. | aipoch/ | 1.9k | — | ~3k | Automated safety check: Pass | MIT | 24 days ago |
| 140 | Use anki-card-creator for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries for study-card generation. | aipoch/ | 1.9k | — | ~2.1k | Automated safety check: Pass | MIT | 24 days ago |
| 141 | 141.Anndata Data structure for annotated matrices in single-cell analysis; use when reading/writing .h5ad (or zarr) and exchanging data with the scverse ecosystem. | aipoch/ | 1.9k | — | ~1.7k | Automated safety check: Pass | MIT | 24 days ago |
| 142 | 142.Arxiv Preflight Run a submission-readiness preflight on a manuscript before arXiv upload. | aipoch/ | 1.9k | — | ~1.8k | Automated safety check: Pass | MIT | 24 days ago |
| 143 | Extracts clinical trial baseline data (study, region, participants, etc.) from article text or PMID. | aipoch/ | 1.9k | — | ~1.2k | Automated safety check: Pass | MIT | 24 days ago |
| 144 | 144.Bib Formatter Convert reference lists and in-text citations between RIS, BibTeX, plain text, and CSL-JSON, triggered when you need to unify bibliography/citation styles before journal submission or compare… | aipoch/ | 1.9k | — | ~1.8k | Automated safety check: Pass | MIT | 24 days ago |
