Backend & APIs · For researchers

Retrieve mouse phenotype data from the Jackson Laboratory Mouse Phenome Database (MPD) via its REST API.

jaechang-hits/SciAgent-Skills

Query EBI QuickGO REST API for GO terms and protein annotations.

jaechang-hits/SciAgent-Skills

Query RegulomeDB v2 GET REST API to score variants for regulatory function and retrieve overlapping evidence (TF binding, histone marks, DNase peaks, footprints, motifs, eQTLs, chromatin state).

jaechang-hits/SciAgent-Skills

Saves and searches past Claude Code sessions so context, decisions, and code persist across conversations.

ccplugins/awesome-claude-code-plugins

Produce a minimal Exa diagnostic bundle that preserves reproducibility without exposing credentials, queries, retrieved content, or customer data.

jeremylongshore/tons-of-skills-marketplace

Query COSMIC for cancer somatic mutations, gene census, mutational signatures, drug resistance variants.

jaechang-hits/SciAgent-Skills

Query openFDA REST API for adverse events (FAERS), labeling, product info, recalls, enforcement.

jaechang-hits/SciAgent-Skills

NHGRI-EBI GWAS Catalog REST API for SNP-trait associations from published GWAS.

jaechang-hits/SciAgent-Skills

KEGG REST API (academic only). An agent skill from jaechang-hits/SciAgent-Skills.

jaechang-hits/SciAgent-Skills

protocols.io REST API: search and fetch wet-lab, bioinformatics, and clinical protocols by keyword, DOI, or category, with steps, reagents, materials, equipment, timing.

jaechang-hits/SciAgent-Skills

Cloudflare Workers deployment using createWorkerHandler from @cyanheads/mcp-ts-core/worker.

cyanheads/pubmed-mcp-server

Share memories and state with other users. An agent skill from sundial-org/awesome-openclaw-skills.

sundial-org/awesome-openclaw-skills

Access the European Nucleotide Archive (ENA) via REST APIs and FTP/Aspera to search and retrieve sequences, raw reads (FASTQ), assemblies, and metadata when you have accession IDs or need…

aipoch/medical-research-skills

Resolve DOIs and retrieve publication metadata from CrossRef registry

wentorai/research-plugins

Look up researcher profiles and academic identities via the ORCID registry

wentorai/research-plugins

Manage open science projects and preprints via the OSF REST API

wentorai/research-plugins

Access earth and environmental science datasets via PANGAEA API

wentorai/research-plugins

Search and retrieve 3D protein structures from the RCSB Protein Data Bank

wentorai/research-plugins

Search PLOS open access journals with full-text Solr-powered API

wentorai/research-plugins

Search PubChem for chemical compounds, structures, and bioassay data

wentorai/research-plugins

Query the ClinPGx (formerly PharmGKB) REST API plus the CPIC PostgREST companion API for pharmacogenomic clinical annotations, CPIC/DPWG dosing guidelines, gene-drug pairs, variant-drug…

jaechang-hits/SciAgent-Skills

Query FDA drug labels (DailyMed) via REST API. An agent skill from jaechang-hits/SciAgent-Skills.

jaechang-hits/SciAgent-Skills

Query NCBI dbSNP for SNP records by rsID, gene, or region via E-utilities and Variation Services REST API.

jaechang-hits/SciAgent-Skills

Query DDInter drug-drug interactions via REST API (1.7M+ interactions, 2,400+ drugs).

jaechang-hits/SciAgent-Skills

Parse HMDB (Human Metabolome Database) local XML for metabolite info, chemical properties, biological context, disease links, spectra, and cross-DB mapping.

jaechang-hits/SciAgent-Skills

Query InterPro REST API for protein domain architecture, family classification, and member-DB integration.

jaechang-hits/SciAgent-Skills

Query Metabolomics Workbench REST API (4,200+ NIH studies) for metabolite ID, study discovery, RefMet standardization, m/z precursor searches, and gene/protein annotations.

jaechang-hits/SciAgent-Skills

Query Reactome pathways via REST: pathway queries, entity lookup, keyword search, gene list enrichment, hierarchy, cross-refs.

jaechang-hits/SciAgent-Skills

Annotate and filter VCF variants with SnpEff and SnpSift. An agent skill from jaechang-hits/SciAgent-Skills.

jaechang-hits/SciAgent-Skills

Cross-reference compound IDs across 20+ databases (ChEMBL, DrugBank, PubChem, ChEBI, PDB, SureChEMBL, HMDB, DrugCentral, BindingDB) via UniChem REST API.

jaechang-hits/SciAgent-Skills

Search the PRIDE Archive v3 REST API for proteomics datasets: discover projects by keyword + faceted filters (organism, instrument, disease, software), fetch project metadata, list and download…

jaechang-hits/SciAgent-Skills

Canonical reference for the unified Context object passed to every tool and resource handler in @cyanheads/mcp-ts-core.

cyanheads/pubmed-mcp-server

API reference for built-in service providers (LLM, Speech, Graph).

cyanheads/pubmed-mcp-server

Write a persuasive prior-authorization / medical-necessity letter to an insurer.

mohitagw15856/pm-claude-skills

Searches the code knowledge graph by function, class, or type using FTS5 full-text search.

athola/claude-night-market

Infinite platform integration for AI agent collaboration. An agent skill from lamm-mit/scienceclaw.

lamm-mit/scienceclaw

Explains why studies on the same biomedical topic reach different or opposing conclusions by auditing differences in population, endpoint definition, sample source, assay or platform, study design…

aipoch/medical-research-skills