Topic · Data & Analytics
Best data cleaning skills, page 3
Data cleaning skills, ranked
Ranked by score. Sort bymost stars,trending,newest,recently updated
| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 97 | Adds and runs data quality checks (dbt-test style assertions) on a project's warehouse tables and saved-query views, and HogQL catalog metrics: not-null, uniqueness, accepted values, referential… | PostHog/ | 40k | — | ~2.8k | Automated safety check: Pass | Unknown | today |
| 98 | Export your entire Prospeo people search to CSV. An agent skill from growthenginenowoslawski/coldoutboundskills. | growthenginenowoslawski/ | 742 | — | ~5k | Automated safety check: Pass | MIT | 2 days ago |
| 99 | Detects aberrant splicing in single rare-disease patients vs a control panel using FRASER 2.0 (Bioconductor; Beta-binomial autoencoder on Intron Jaccard Index, default delta cutoff 0.1, q… | GPTomics/ | 1.2k | 2 repos | ~5.1k | Automated safety check: Pass | MIT | 1 mo ago |
| 100 | 100.Audit Dataset Audit tabular datasets before analysis or training for schema drift, missing values, duplicate rows or IDs, target imbalance, and entity or group leakage across splits using pure-stdlib helpers. | PKU-YuanGroup/ | 617 | — | ~637 | Automated safety check: Pass | MIT | 3 days ago |
| 101 | 101.Programmatic Eda Systematic exploratory data analysis. An agent skill from nimrodfisher/data-analytics-skills. | nimrodfisher/ | 465 | — | ~582 | Automated safety check: Pass | MIT | 13 days ago |
| 102 | Extracts and records architectural decisions from diffs, conversation context, and explicit choices. | ash1794/ | 163 | — | ~1.4k | Automated safety check: Pass | MIT | today |
| 103 | 103.Data Exploration Profile and explore datasets to understand their shape, quality, and patterns before analysis. | w95/ | 237 | 1 repo | ~2k | Automated safety check: Pass | MIT | 7 mo ago |
| 104 | 104.Cost Anomaly MAD-based outlier detection on session spend. An agent skill from ruvnet/ruflo. | ruvnet/ | 74k | — | ~935 | Automated safety check: Notes | MIT | today |
| 105 | Spillover compensation and data transformation for flow cytometry. | FreedomIntelligence/ | 3.1k | 1 repo | ~1.4k | Automated safety check: Pass | No licence | 2 mo ago |
| 106 | Quality metrics for IMC data including signal-to-noise, channel correlation, tissue integrity, and acquisition QC. | FreedomIntelligence/ | 3.1k | 1 repo | ~2.7k | Automated safety check: Pass | No licence | 2 mo ago |
| 107 | Preprocessing and harmonization of multi-omics data before integration. | FreedomIntelligence/ | 3.1k | 1 repo | ~1.9k | Automated safety check: Pass | No licence | 2 mo ago |
| 108 | Load and parse mass spectrometry data formats including mzML, mzXML, and quantification tool outputs like MaxQuant proteinGroups.txt. | FreedomIntelligence/ | 3.1k | 1 repo | ~1.2k | Automated safety check: Pass | No licence | 2 mo ago |
| 109 | 109.Profiling Tables Deep-dive data profiling for a specific table. An agent skill from astronomer/agents. | astronomer/ | 451 | — | ~964 | Automated safety check: Pass | Apache-2.0 | today |
| 110 | Route data-related requests to the right Monte Carlo skill or workflow. | sickn33/ | 47k | 1 repo | ~2.6k | Automated safety check: Warn | MIT | today |
| 111 | Backward (references) and forward (citing papers) traversal via OpenAlex, with relevance filtering and deduplication | wentorai/ | 858 | — | ~1.3k | Automated safety check: Pass | Unknown | 1 mo ago |
| 112 | 112.Data Transform Transform, clean, reshape, and preprocess data using pandas and numpy. | Microck/ | 403 | 3 repos | ~4.3k | Automated safety check: Pass | Unknown | 1 mo ago |
| 113 | Tools and guidance for data upload, dataset management, data validation, and preparing data for DataRobot projects. | Kilo-Org/ | 190 | — | ~1.8k | Automated safety check: Pass | Apache-2.0 | 9 days ago |
| 114 | 114.Hickey Evaluate code (especially LLM-generated) for structural simplicity using Rich Hickey's "Simple Made Easy" framework. | srid/ | 963 | — | ~6.8k | Automated safety check: Pass | Unknown | 2 mo ago |
| 115 | 115.Bio Splicing Qc Assesses RNA-seq data quality specifically for alternative splicing analysis. | GPTomics/ | 1.2k | 2 repos | ~6.2k | Automated safety check: Pass | MIT | 1 mo ago |
| 116 | 116.Audit A skill your agent uses when the user wants to check paper-library data quality, diagnose missing metadata, filename issues, DOI duplicates, title mismatches, or repairable metadata problems. | ZimoLiao/ | 576 | — | ~415 | Automated safety check: Pass | MIT | 12 days ago |
| 117 | Finds out why a data quality check failed or errored, looks at the rows it matched, and recommends the fix. | PostHog/ | 40k | — | ~2.1k | Automated safety check: Pass | Unknown | today |
| 118 | 118.Query Validation SQL query review for correctness, performance, and best practices. | nimrodfisher/ | 465 | — | ~551 | Automated safety check: Pass | MIT | 13 days ago |
| 119 | 119.Memory Audit Show everything Claudia knows with provenance tracing and entity counts. | kbanc85/ | 296 | — | ~1.1k | Automated safety check: Pass | Unknown | 1 mo ago |
| 120 | 120.Memory Health Check memory system health and data quality. An agent skill from kbanc85/claudia. | kbanc85/ | 296 | — | ~1.6k | Automated safety check: Pass | Unknown | 1 mo ago |
| 121 | [Internal sub-skill of polylith-migrate-orchestrator (optional, runs only when opted in during polylith-migrate-discover). | DavidVujic/ | 553 | — | ~1.9k | Automated safety check: Pass | MIT | 3 days ago |
| 122 | Integrate multiple plot point analysis results into comprehensive reports, generating high-quality analysis through deduplication, classification, sorting, and summarization. | VanGong1999/ | 445 | — | ~1.3k | Automated safety check: Pass | MIT | 4 mo ago |
| 123 | A skill your agent uses when cleaning clinical trial data, preparing data for FDA/EMA submission, standardizing SDTM datasets, handling missing values in clinical studies, detecting outliers in lab… | aipoch/ | 2k | — | ~2.4k | Automated safety check: Pass | MIT | 21 days ago |
| 124 | 124.Knn Imputation A skill your agent uses when filtering genes with high missingness and then imputing missing values in a bulk expression matrix with group-aware KNN through DMwR2, where donor samples are restricted… | aipoch/ | 2k | — | ~2.5k | Automated safety check: Pass | MIT | 21 days ago |
| 125 | A skill your agent uses when you need a standardized R CLI workflow to train a two-class random forest model from an expression-like feature matrix, rank variable importance, and generate… | aipoch/ | 2k | — | ~2.7k | Automated safety check: Pass | MIT | 21 days ago |
| 126 | A skill your agent uses when you need a standardized R CLI workflow to run two-class SVM-RFE feature ranking on an expression-like matrix, choose an informative feature count from cross-validated… | aipoch/ | 2k | — | ~1.8k | Automated safety check: Pass | MIT | 21 days ago |
| 127 | Process many sequence files in batch (count, merge, split, convert, summarize) with memory-safe streaming and on-disk indexing using Biopython, pysam, or pyfastx. | GPTomics/ | 1.2k | 1 repo | ~3k | Automated safety check: Pass | MIT | 1 mo ago |
| 128 | Designs QC, corrects signal drift, removes batch effects, filters features, normalizes samples, and imputes missing values for untargeted LC-MS/GC-MS metabolomics, framing each step as a measurement… | GPTomics/ | 1.2k | 1 repo | ~5k | Automated safety check: Pass | MIT | 1 mo ago |
| 129 | Orchestrates an end-to-end MeRIP-seq / m6A-seq analysis from raw FASTQ to differential m6A peak calls and metagene plots, chaining fastp adapter trimming, STAR splice-aware alignment (NO… | GPTomics/ | 1.2k | 1 repo | ~4.8k | Automated safety check: Pass | MIT | 1 mo ago |
| 130 | Orchestrates the end-to-end bisulfite/EM-seq methylation pipeline from FASTQ to differentially methylated regions, chaining Trim Galore/fastp QC, Bismark alignment + deduplication, methylation… | GPTomics/ | 1.2k | 1 repo | ~3.7k | Automated safety check: Pass | MIT | 1 mo ago |
| 131 | Clean up FlyDSL kernels and shared helpers while preserving numerical behavior and performance. | ROCm/ | 288 | — | ~6.5k | Automated safety check: Notes | Unknown | today |
| 132 | Prevent semantic code duplication with capability index and check-before-write | alinaqi/ | 707 | — | ~3.9k | Automated safety check: Pass | MIT | 13 days ago |
| 133 | Process automate data cleaning, transformation, and validation for ML tasks. | jeremylongshore/ | 2.8k | — | ~1k | Automated safety check: Pass | MIT | today |
| 134 | Process use when you need to ensure database integrity through comprehensive data validation. | jeremylongshore/ | 2.8k | — | ~1.9k | Automated safety check: Pass | MIT | today |
| 135 | A skill your agent uses when configuring scheduler events and background jobs in Frappe/ERPNext v14/v15/v16. | Impertio-Studio/ | 187 | — | ~2.7k | Automated safety check: Pass | MIT | 20 days ago |
| 136 | Create Earth2Studio diagnostic model wrappers for single-step data transformations, including simple derived diagnostics, packaged AutoModel diagnostics, and generative or diffusion diagnostics. | NVIDIA/ | 3.5k | — | ~3.7k | Automated safety check: Pass | Apache-2.0 | today |
| 137 | Cosmos-Embed1 video-text embedding for text-to-video retrieval, video-to-video search, semantic deduplication, and fine-tuning. | NVIDIA/ | 3.5k | — | ~3.5k | Automated safety check: Notes | Apache-2.0 | today |
| 138 | 138.Using Duckdb Query Fabric lakehouse and warehouse data using DuckDB, either locally or inside a Fabric notebook. | data-goblin/ | 1k | — | ~1.2k | Automated safety check: Pass | GPL-3.0 | today |
| 139 | Deduplicate Podium contacts in production and survive the data-quality failures — phone-format inconsistency producing four contacts for one phone, merge-api ordering that silently discards the… | jeremylongshore/ | 2.8k | — | ~4.8k | Automated safety check: Pass | MIT | today |
| 140 | Assess trusted Snowflake data metric function coverage and expectation evidence without reading customer rows. | jeremylongshore/ | 2.8k | — | ~2k | Automated safety check: Pass | MIT | today |
| 141 | ⚠️ CRITICAL USER EXPERIENCE-BASED SKILL - ALWAYS CONSULT BEFORE DATA PREPROCESSING ⚠️ Prevents catastrophic errors (88.9% error rate in V1.0 case study) through multi-level feature analysis, data… | foryourhealth111-pixel/ | 3.6k | — | ~5k | Automated safety check: Pass | Apache-2.0 | 1 mo ago |
| 142 | Quality control and normalization for metabolomics data. An agent skill from majiayu000/claude-skill-registry. | majiayu000/ | 666 | 2 repos | ~1.6k | Automated safety check: Pass | MIT | today |
| 143 | Quality control and assessment for proteomics data. An agent skill from majiayu000/claude-skill-registry. | majiayu000/ | 666 | 2 repos | ~1.5k | Automated safety check: Pass | MIT | today |
| 144 | All-in-one read preprocessing with fastp including adapter trimming, quality filtering, deduplication, base correction, and HTML report generation. | majiayu000/ | 666 | 2 repos | ~1.6k | Automated safety check: Pass | MIT | today |