Gget
davila7/claude-code-templates
CLI/Python toolkit for rapid bioinformatics queries. An agent skill from davila7/claude-code-templates.
24 biomedical research skills. An agent skill from wentorai/research-plugins.
Install Biomedical Skills
$ npx skills add wentorai/research-plugins --skill biomedical-skills -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install wentorai/research-plugins biomedical-skills --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/wentorai/research-plugins.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/domains/biomedical .claude/skills/biomedical-skills && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "biomedical-skills" agent skill from https://github.com/wentorai/research-plugins/tree/main/skills/domains/biomedical into .claude/skills/biomedical-skills/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "biomedical-skills", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/wentorai/research-plugins/tree/main/skills/domains/biomedicalType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add wentorai/research-plugins --skill biomedical-skills -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install wentorai/research-plugins biomedical-skills --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/wentorai/research-plugins.git skills-src && mkdir -p .agents/skills && cp -r skills-src/skills/domains/biomedical .agents/skills/biomedical-skills && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "biomedical-skills" agent skill from https://github.com/wentorai/research-plugins/tree/main/skills/domains/biomedical into .agents/skills/biomedical-skills/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "biomedical-skills", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add wentorai/research-plugins --skill biomedical-skills -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install wentorai/research-plugins biomedical-skills --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/wentorai/research-plugins.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/skills/domains/biomedical .cursor/skills/biomedical-skills && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "biomedical-skills" agent skill from https://github.com/wentorai/research-plugins/tree/main/skills/domains/biomedical into .cursor/skills/biomedical-skills/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "biomedical-skills", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/wentorai/research-plugins.git --path skills/domains/biomedical--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add wentorai/research-plugins --skill biomedical-skills -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install wentorai/research-plugins biomedical-skills --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/wentorai/research-plugins.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/skills/domains/biomedical .gemini/skills/biomedical-skills && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "biomedical-skills" agent skill from https://github.com/wentorai/research-plugins/tree/main/skills/domains/biomedical into .gemini/skills/biomedical-skills/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "biomedical-skills", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install wentorai/research-plugins biomedical-skillsInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add wentorai/research-plugins --skill biomedical-skills -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/wentorai/research-plugins.git skills-src && mkdir -p .github/skills && cp -r skills-src/skills/domains/biomedical .github/skills/biomedical-skills && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "biomedical-skills" agent skill from https://github.com/wentorai/research-plugins/tree/main/skills/domains/biomedical into .github/skills/biomedical-skills/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "biomedical-skills", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add wentorai/research-plugins --skill biomedical-skills -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install wentorai/research-plugins biomedical-skills --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/wentorai/research-plugins.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/skills/domains/biomedical .opencode/skills/biomedical-skills && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "biomedical-skills" agent skill from https://github.com/wentorai/research-plugins/tree/main/skills/domains/biomedical into .opencode/skills/biomedical-skills/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "biomedical-skills", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
Facts
- Skill name
biomedical-skills- GitHub stars
- 298
- Used in
- 1 other repo
- Token cost
- ~827 tokens
- SKILL.md length
- 263 words
- Files
- 1
- Skills in repo
- 405
- Repo updated
- First seen
- Licence
- MIT
At a glance
24 biomedical research skills. An agent skill from wentorai/research-plugins.
- Tasks that involve Bioinformatics
- Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md
- Tasks that involve Clinical and healthcare research
What it does
Biomedical Skills is an agent skill from wentorai/research-plugins. 24 biomedical research skills. Trigger: medical research, clinical trials, genomics, bioinformatics. Design: domain databases, wet-lab/dry-lab methods, and ethical compliance guides.
Its SKILL.md is about 830 tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
It sits in Research & Science, covering Bioinformatics and Clinical and healthcare research. It works with AlphaFold and Ensembl. The repository describes itself as: 350+ academic research skills, MCP configs, and plugins for Research-Claw and AI agents. The licence is MIT.
When your agent uses it
- Tasks that involve Bioinformatics
- Tasks that involve Clinical and healthcare research
Example prompts
- “/biomedical-skills”
What it can do on your machine
Read from SKILL.md and the folder at commit bf44b3c. It shows what the files ask for, not the result of running them.
Tool permissions
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Runs code
No scripts in the folder and no shell commands in SKILL.md.
From the folder's file list and the shell code blocks in SKILL.md.
Network
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Credentials
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Context cost
Biomedical Skills loads about 827 tokens when it runs. Until then it costs about 50 tokens; SKILL.md has 263 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
Safety
Auto-check passed
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
SKILL.md
The full file from wentorai/research-plugins at commit bf44b3c, republished under its MIT licence (© wentorai). 263 words, ~827 tokens.
Download SKILL.mdSave it as
.claude/skills/biomedical-skills/SKILL.md (or your agent's skills folder).- name
- biomedical-skills
- description
- 24 biomedical research skills. Trigger: medical research, clinical trials, genomics, bioinformatics. Design: domain databases, wet-lab/dry-lab methods, and ethical compliance guides.
Biomedical Research — 24 Skills
Select the skill matching the user's need, then read its SKILL.md.
| Skill | Description |
|---|---|
| alphafold-api | Query AlphaFold protein structure predictions by UniProt accession |
| bioagents-guide | AI scientist framework for autonomous biological research workflows |
| biothings-api | Query gene, variant, and drug annotations via BioThings APIs |
| clawbio-guide | OpenClaw bioinformatics skill library for genomics pipelines |
| clinical-dialogue-agents-guide | Papers on AI agents for clinical dialogue and medical QA |
| clinical-research-guide | Design clinical studies and report using CONSORT, STROBE guidelines |
| clinicaltrials-api | Clinical trial registry database search API |
| clinicaltrials-api-v2 | Search and analyze clinical trials via the ClinicalTrials.gov v2 API |
| ena-sequence-api | Access nucleotide sequence data from the European Nucleotide Archive |
| enrichr-api | Perform gene set enrichment analysis using the Enrichr API |
| ensembl-rest-api | Query gene, sequence, and variant data via the Ensembl REST API |
| epidemiology-guide | Epidemiological study designs, measures of association, and public health ana... |
| genomas-guide | Automate gene expression analysis with the GenoMAS multi-agent system |
| genomics-analysis-guide | Workflows for RNA-seq, GWAS, and variant calling in genomic research |
| genotex-benchmark-guide | Benchmark for LLM agents on gene expression data analysis |
| med-researcher-guide | Multi-agent system for biomedical literature review and synthesis |
| med-researcher-r1-guide | Medical deep research agent with reasoning chain analysis |
| medgeclaw-guide | AI research assistant for biomedicine, RNA-seq, and drug discovery |
| medical-data-api | Access FDA drug data and WHO global health statistics for research |
| medical-imaging-guide | Medical image analysis with deep learning for research applications |
| ncbi-blast-api | Run sequence similarity searches via the NCBI BLAST REST API |
| ncbi-datasets-api | Access genomes, genes, and taxonomy data via NCBI Datasets v2 API |
| pdb-structure-api | Search and retrieve 3D protein structures from the RCSB Protein Data Bank |
| quickgo-api | Browse and search Gene Ontology annotations via the QuickGO API |
© wentorai, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
Files
Just SKILL.md in skills/domains/biomedical of wentorai/research-plugins.
Open the folder on GitHubat commit bf44b3c
Used in 1 other repository
We found 1 copy of this SKILL.md (exact, near-identical or edited) in other folders, from 1 other GitHub owner. This page covers the copy in wentorai/research-plugins, which our catalogue first saw on October 7, 2026.
Compare with similar skills
Biomedical Skills next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Biomedical Skills this skillwentorai/research-plugins | 298 | 1 repos | ~827 | Automated safety check: Pass | MIT | |
| Ggetdavila7/claude-code-templates | 33k | 10 repos | ~6.3k | Automated safety check: Pass | MIT | |
| Ggetaipoch/medical-research-skills | 1.9k | — | ~816 | Automated safety check: Pass | MIT | |
| Gget Genomic Databasesjaechang-hits/SciAgent-Skills | 374 | 2 repos | ~5.3k | Automated safety check: Pass | BSD-2-Clause | |
| Uniprot Protein Databasejaechang-hits/SciAgent-Skills | 374 | 1 repos | ~3.4k | Automated safety check: Pass | CC-BY-4.0 | |
| Biomedical Analysis Dispatchxjtulyc/MedgeClaw | 617 | 1 repos | ~2k | Automated safety check: Pass | None |
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Query UniProt REST API: search by gene/protein name, fetch FASTA, map IDs (Ensembl, PDB, RefSeq), access Swiss-Prot annotations.
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Related
Categories
Questions about Biomedical Skills
What does Biomedical Skills do?
24 biomedical research skills. An agent skill from wentorai/research-plugins. Biomedical Skills is an agent skill from wentorai/research-plugins. 24 biomedical research skills.
When should I use Biomedical Skills?
Biomedical Skills fits situations like: tasks that involve Bioinformatics; tasks that involve Clinical and healthcare research.
How do I install Biomedical Skills in Claude Code?
Run `npx skills add wentorai/research-plugins --skill biomedical-skills -a claude-code`. Or copy the skill folder (skills/domains/biomedical in wentorai/research-plugins) into .claude/skills/biomedical-skills in your project. Claude Code loads it when a task matches its description.
How do I install Biomedical Skills in Codex?
Run `npx skills add wentorai/research-plugins --skill biomedical-skills -a codex`. Or copy the skill folder (skills/domains/biomedical in wentorai/research-plugins) into .agents/skills/biomedical-skills in your project. Codex loads it when a task matches its description.
Can I use Biomedical Skills in Cursor, Gemini CLI or GitHub Copilot?
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add wentorai/research-plugins --skill biomedical-skills -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/biomedical-skills, .gemini/skills/biomedical-skills, .github/skills/biomedical-skills and .opencode/skills/biomedical-skills in your project.
What does Biomedical Skills need to run?
SKILL.md names no scripts, command-line tools or credentials: Biomedical Skills is instructions for the agent only.
Does Biomedical Skills access the network?
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Is Biomedical Skills safe to install?
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
What licence does Biomedical Skills use?
Biomedical Skills is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
How many tokens does Biomedical Skills use?
About 827 tokens (SKILL.md is roughly 3.3k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
What are the alternatives to Biomedical Skills?
Skills that share tags, products or a category with Biomedical Skills: Gget (davila7/claude-code-templates, 33k stars), Gget (aipoch/medical-research-skills, 1.9k stars), Gget Genomic Databases (jaechang-hits/SciAgent-Skills, 374 stars) and Uniprot Protein Database (jaechang-hits/SciAgent-Skills, 374 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
Who maintains Biomedical Skills?
wentorai (a GitHub user) maintains it in wentorai/research-plugins, which has 298 GitHub stars. The repository holds 405 skills in this directory. The repository was last updated on June 19, 2026.
Source: wentorai/research-plugins on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.