GitHub Deep Research
bytedance/deer-flow
Researches a GitHub repository over four rounds using the GitHub API and web search, then writes a structured markdown report with timeline, metrics and Mermaid diagrams.
Conduct in-depth, multi-step research on a given topic by decomposing queries, finding diverse sources, cross-referencing findings, and synthesizing a comprehensive report.
$ npx skills add seb1n/awesome-ai-agent-skills --skill deep-research -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install seb1n/awesome-ai-agent-skills deep-research --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/seb1n/awesome-ai-agent-skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/research-and-knowledge/deep-research .claude/skills/deep-research && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "deep-research" agent skill from https://github.com/seb1n/awesome-ai-agent-skills/tree/main/research-and-knowledge/deep-research into .claude/skills/deep-research/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "deep-research", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/seb1n/awesome-ai-agent-skills/tree/main/research-and-knowledge/deep-researchType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add seb1n/awesome-ai-agent-skills --skill deep-research -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install seb1n/awesome-ai-agent-skills deep-research --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/seb1n/awesome-ai-agent-skills.git skills-src && mkdir -p .agents/skills && cp -r skills-src/research-and-knowledge/deep-research .agents/skills/deep-research && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "deep-research" agent skill from https://github.com/seb1n/awesome-ai-agent-skills/tree/main/research-and-knowledge/deep-research into .agents/skills/deep-research/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "deep-research", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add seb1n/awesome-ai-agent-skills --skill deep-research -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install seb1n/awesome-ai-agent-skills deep-research --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/seb1n/awesome-ai-agent-skills.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/research-and-knowledge/deep-research .cursor/skills/deep-research && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "deep-research" agent skill from https://github.com/seb1n/awesome-ai-agent-skills/tree/main/research-and-knowledge/deep-research into .cursor/skills/deep-research/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "deep-research", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/seb1n/awesome-ai-agent-skills.git --path research-and-knowledge/deep-research--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add seb1n/awesome-ai-agent-skills --skill deep-research -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install seb1n/awesome-ai-agent-skills deep-research --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/seb1n/awesome-ai-agent-skills.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/research-and-knowledge/deep-research .gemini/skills/deep-research && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "deep-research" agent skill from https://github.com/seb1n/awesome-ai-agent-skills/tree/main/research-and-knowledge/deep-research into .gemini/skills/deep-research/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "deep-research", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install seb1n/awesome-ai-agent-skills deep-researchInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add seb1n/awesome-ai-agent-skills --skill deep-research -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/seb1n/awesome-ai-agent-skills.git skills-src && mkdir -p .github/skills && cp -r skills-src/research-and-knowledge/deep-research .github/skills/deep-research && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "deep-research" agent skill from https://github.com/seb1n/awesome-ai-agent-skills/tree/main/research-and-knowledge/deep-research into .github/skills/deep-research/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "deep-research", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add seb1n/awesome-ai-agent-skills --skill deep-research -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install seb1n/awesome-ai-agent-skills deep-research --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/seb1n/awesome-ai-agent-skills.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/research-and-knowledge/deep-research .opencode/skills/deep-research && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "deep-research" agent skill from https://github.com/seb1n/awesome-ai-agent-skills/tree/main/research-and-knowledge/deep-research into .opencode/skills/deep-research/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "deep-research", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
deep-researchConduct in-depth, multi-step research on a given topic by decomposing queries, finding diverse sources, cross-referencing findings, and synthesizing a comprehensive report.
Deep Research is an agent skill from seb1n/awesome-ai-agent-skills. Conduct in-depth, multi-step research on a given topic by decomposing queries, finding diverse sources, cross-referencing findings, and synthesizing a comprehensive report. Use when the user requests deep research or provides relevant inputs for this workflow.
Its SKILL.md is about 2.2k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
It sits in Research & Science, covering Deep research. The repository describes itself as: 103 ready-to-use AI agent skills for Claude Code, OpenAI Codex, Gemini CLI, Cursor, GitHub Copilot, Windsurf, and other Agent Skills-compatible tools. Complete SKILL.md… The licence is MIT.
6 steps, taken from the first numbered list in SKILL.md.
Read from SKILL.md and the folder at commit 75865a5. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
No scripts in the folder and no shell commands in SKILL.md.
From the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Deep Research loads about 2.2k tokens when it runs. Until then it costs about 69 tokens; SKILL.md has 1,084 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
The full file from seb1n/awesome-ai-agent-skills at commit 75865a5, republished under its MIT licence (© seb1n). 1,084 words, ~2,197 tokens.
.claude/skills/deep-research/SKILL.md (or your agent's skills folder).This skill enables an AI agent to perform rigorous, multi-step research on complex topics. Rather than returning a single search result, the agent decomposes the research question into sub-queries, gathers information from diverse source types (academic papers, industry reports, official documentation, news articles, and expert commentary), cross-references findings for consistency, and synthesizes everything into a structured, citation-backed report. The result is a thorough analysis that surfaces nuance, identifies conflicting viewpoints, and highlights knowledge gaps.
Decompose the Research Query: Break the user's high-level question into 3-6 targeted sub-queries that cover distinct facets of the topic. Each sub-query should address a specific angle such as historical context, current state, key players, technical details, or future outlook. This ensures broad coverage rather than shallow retrieval from a single search.
Identify and Gather Sources: For each sub-query, search across multiple source categories: academic databases, official documentation, reputable news outlets, industry analyst reports, and community forums. Aim for at least 2-3 sources per sub-query. Record the URL, publication date, author, and a relevance score for each source to enable later prioritization.
Extract and Organize Key Findings: Read each source and extract the core claims, data points, statistics, and expert opinions. Organize findings into a structured outline grouped by theme or sub-query. Tag each finding with its source for traceability.
Cross-Reference and Validate: Compare findings across sources to identify consensus, contradictions, and gaps. Flag any claims that appear in only one source or that conflict with the majority of evidence. Note the recency and authority of each source when resolving disagreements.
Synthesize the Report: Combine validated findings into a coherent narrative. Structure the report with an executive summary, detailed sections for each theme, a discussion of limitations and open questions, and a full reference list. Use clear headings and bullet points for readability.
Review and Refine: Re-read the report for logical flow, unsupported claims, and missing context. Verify that all citations are accurate and that the executive summary faithfully reflects the detailed findings. Offer the user suggestions for further research if gaps remain.
Provide the agent with a research topic and, optionally, specific sub-questions, desired depth level, or preferred source types. The agent will follow the full workflow and return a structured report.
Research the current state of WebAssembly adoption in 2025.
Focus areas:
- Browser and server-side runtime support
- Major companies and projects using WebAssembly in production
- Performance benchmarks compared to native code
- Toolchain maturity (languages, compilers, debugging)
- Key limitations and open challengesUser Request:
Conduct deep research on the state of WebAssembly in 2025 — adoption, toolchains, performance, and outlook.
Query Decomposition:
| Sub-Query | Angle |
|---|---|
| "WebAssembly browser support 2025 Chrome Firefox Safari" | Runtime support |
| "WebAssembly server-side WASI Wasmtime Wasmer production" | Server-side adoption |
| "WebAssembly performance benchmarks vs native 2024 2025" | Performance data |
| "Rust Go C++ compile to WebAssembly toolchain maturity" | Toolchain ecosystem |
| "WebAssembly limitations garbage collection threads 2025" | Open challenges |
Sources Gathered (excerpt):
Synthesized Report (excerpt):
Executive Summary: WebAssembly has matured from a browser-only technology to a portable compilation target for server-side, edge, and embedded workloads. All major browsers ship full Wasm 2.0 support including the GC and Threads proposals. WASI 0.2 has stabilized the component model, enabling language-agnostic plug-in architectures adopted by Fastly, Fermyon, and Cloudflare Workers. Performance benchmarks show Wasm executing at 85-95% of native speed for compute-heavy tasks, though startup latency and GC integration remain areas of active work. The toolchain ecosystem is strongest for Rust and C/C++, with Go and Python support improving rapidly. Key open challenges include the lack of a standardized debugging protocol and limited direct DOM access for UI-heavy browser applications.
User Request:
Research the competitive landscape for AI-powered code review tools ahead of our product launch.
Query Decomposition:
| Sub-Query | Angle |
|---|---|
| "AI code review tools market 2025 overview" | Market landscape |
| "GitHub Copilot code review features pricing" | Competitor deep-dive |
| "CodeRabbit AI automated code review capabilities" | Competitor deep-dive |
| "developer survey AI code review adoption satisfaction" | User sentiment |
| "AI code review tool limitations false positives" | Weaknesses and gaps |
Synthesized Report (excerpt):
Market Overview: The AI code review market has consolidated around three tiers: integrated platform tools (GitHub Copilot, GitLab Duo), standalone AI review services (CodeRabbit, Codacy AI), and open-source linters with LLM augmentation (MegaLinter + GPT wrappers). Developer adoption surveys indicate 42% of teams in companies with 50+ engineers use some form of AI-assisted review.
Competitive Gap Identified: No current tool provides repository-wide architectural consistency checks — they operate at the PR diff level. A product that combines diff-level suggestions with codebase-wide pattern enforcement could capture the underserved "platform engineering" segment.
© seb1n, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
Just SKILL.md in research-and-knowledge/deep-research of seb1n/awesome-ai-agent-skills.
Open the folder on GitHubat commit 75865a5
Deep Research next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Deep Research this skillseb1n/awesome-ai-agent-skills | 206 | — | ~2.2k | Automated safety check: Pass | MIT | |
| GitHub Deep Researchbytedance/deer-flow | 84k | 4 repos | ~1.3k | Automated safety check: Pass | MIT | |
| Deep Research WorkflowTokenRhythm/opensquilla | 7.1k | — | ~1.3k | Automated safety check: Pass | Apache-2.0 | |
| Deep Researchsanjay3290/ai-skills | 431 | 9 repos | ~683 | Automated safety check: Notes | Apache-2.0 | |
| Horizontal-Vertical Deep ResearchKKKKhazix/khazix-skills | 21k | — | ~2.1k | Automated safety check: Pass | MIT | |
| Academic Research PipelineImbad0202/academic-research-skills | 51k | — | ~15k | Automated safety check: Pass | Custom licence |
bytedance/deer-flow
Researches a GitHub repository over four rounds using the GitHub API and web search, then writes a structured markdown report with timeline, metrics and Mermaid diagrams.
TokenRhythm/opensquilla
Runs multi-round research in three stages with a persisted state file, evidence tracking and a long-form report with per-claim citations.
sanjay3290/ai-skills
Execute autonomous multi-step research using Google Gemini Deep Research Agent.
KKKKhazix/khazix-skills
Runs a two-axis deep research method on a product, company, concept or person: its full history over time, compared with peers today, delivered as a typeset PDF report.
Imbad0202/academic-research-skills
Orchestrates a ten-stage academic workflow from research to finished manuscript, including integrity checks, two rounds of peer review and revision.
Imbad0202/academic-research-skills-codex
A router skill that sends academic work such as literature reviews, drafting, citation checks, peer review and revision to the right workflow in the ARS suite.
seb1n/awesome-ai-agent-skills
Plan, execute, document, and retest authorized security assessments of AI agents and multi-agent workflows using safe adversarial cases, synthetic identities, canaries, and evidence-based findings.
seb1n/awesome-ai-agent-skills
Build a preliminary, evidence-based EU AI Act readiness assessment across AI-system inventory, territorial scope, operator roles, prohibited-practice screening, risk classification, transparency…
seb1n/awesome-ai-agent-skills
Design and verify auditable human oversight, approval gates, escalation paths, and safe state transitions for AI agent workflows.
seb1n/awesome-ai-agent-skills
Design, implement, harden, and verify Model Context Protocol (MCP) servers with precise tool contracts, least-privilege authorization, safe transports, structured errors, and interoperability tests.
seb1n/awesome-ai-agent-skills
Inspect, extract, OCR, create, merge, split, reorder, rotate, annotate, fill, redact, compress, secure, and verify PDF documents while preserving source files and visual fidelity.
seb1n/awesome-ai-agent-skills
Audit agent skills, plugins, prompts, manifests, scripts, dependencies, and bundled assets for provenance, prompt-injection, permission, execution, exfiltration, persistence, and update risk.
Categories
Conduct in-depth, multi-step research on a given topic by decomposing queries, finding diverse sources, cross-referencing findings, and synthesizing a comprehensive report. Deep Research is an agent skill from seb1n/awesome-ai-agent-skills. Conduct in-depth, multi-step research on a given topic by decomposing queries, finding diverse sources, cross-referencing findings, and synthesizing a comprehensive report.
Deep Research fits situations like: the user requests deep research; provides relevant inputs for this workflow.
Run `npx skills add seb1n/awesome-ai-agent-skills --skill deep-research -a claude-code`. Or copy the skill folder (research-and-knowledge/deep-research in seb1n/awesome-ai-agent-skills) into .claude/skills/deep-research in your project. Claude Code loads it when a task matches its description.
Run `npx skills add seb1n/awesome-ai-agent-skills --skill deep-research -a codex`. Or copy the skill folder (research-and-knowledge/deep-research in seb1n/awesome-ai-agent-skills) into .agents/skills/deep-research in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add seb1n/awesome-ai-agent-skills --skill deep-research -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/deep-research, .gemini/skills/deep-research, .github/skills/deep-research and .opencode/skills/deep-research in your project.
SKILL.md names no scripts, command-line tools or credentials: Deep Research is instructions for the agent only. Our summary lists: Python 3.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
Deep Research is published under the MIT licence (declared in SKILL.md). It allows redistribution, so the full SKILL.md is shown on this page.
About 2.2k tokens (SKILL.md is roughly 8.8k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
Skills that share tags, products or a category with Deep Research: GitHub Deep Research (bytedance/deer-flow, 84k stars), Deep Research Workflow (TokenRhythm/opensquilla, 7.1k stars), Deep Research (sanjay3290/ai-skills, 431 stars) and Horizontal-Vertical Deep Research (KKKKhazix/khazix-skills, 21k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
seb1n (a GitHub user) maintains it in seb1n/awesome-ai-agent-skills, which has 206 GitHub stars. The repository holds 101 skills in this directory. The repository was last updated on August 9, 2026.
Source: seb1n/awesome-ai-agent-skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.