Claude Code Agent Development
anthropics/claude-plugins-official
Explains how to write agents for Claude Code plugins: the markdown file with YAML frontmatter, trigger descriptions, model and color settings, and system prompt design.
Compose one publication-grade multi-panel figure. An agent skill from JimLiu/science-skills.
$ npx skills add JimLiu/science-skills --skill figure-composer -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install JimLiu/science-skills figure-composer --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/JimLiu/science-skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/figure-composer .claude/skills/figure-composer && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "figure-composer" agent skill from https://github.com/JimLiu/science-skills/tree/main/skills/figure-composer into .claude/skills/figure-composer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "figure-composer", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/JimLiu/science-skills/tree/main/skills/figure-composerType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add JimLiu/science-skills --skill figure-composer -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install JimLiu/science-skills figure-composer --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/JimLiu/science-skills.git skills-src && mkdir -p .agents/skills && cp -r skills-src/skills/figure-composer .agents/skills/figure-composer && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "figure-composer" agent skill from https://github.com/JimLiu/science-skills/tree/main/skills/figure-composer into .agents/skills/figure-composer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "figure-composer", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add JimLiu/science-skills --skill figure-composer -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install JimLiu/science-skills figure-composer --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/JimLiu/science-skills.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/skills/figure-composer .cursor/skills/figure-composer && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "figure-composer" agent skill from https://github.com/JimLiu/science-skills/tree/main/skills/figure-composer into .cursor/skills/figure-composer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "figure-composer", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/JimLiu/science-skills.git --path skills/figure-composer--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add JimLiu/science-skills --skill figure-composer -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install JimLiu/science-skills figure-composer --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/JimLiu/science-skills.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/skills/figure-composer .gemini/skills/figure-composer && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "figure-composer" agent skill from https://github.com/JimLiu/science-skills/tree/main/skills/figure-composer into .gemini/skills/figure-composer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "figure-composer", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install JimLiu/science-skills figure-composerInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add JimLiu/science-skills --skill figure-composer -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/JimLiu/science-skills.git skills-src && mkdir -p .github/skills && cp -r skills-src/skills/figure-composer .github/skills/figure-composer && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "figure-composer" agent skill from https://github.com/JimLiu/science-skills/tree/main/skills/figure-composer into .github/skills/figure-composer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "figure-composer", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add JimLiu/science-skills --skill figure-composer -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install JimLiu/science-skills figure-composer --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/JimLiu/science-skills.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/skills/figure-composer .opencode/skills/figure-composer && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "figure-composer" agent skill from https://github.com/JimLiu/science-skills/tree/main/skills/figure-composer into .opencode/skills/figure-composer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "figure-composer", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
figure-composerCompose one publication-grade multi-panel figure. An agent skill from JimLiu/science-skills.
Figure Composer is an agent skill from JimLiu/science-skills. Compose one publication-grade multi-panel figure. Entry from a one-line claim + data refs, OR from an existing figure via deriveoutline(png). Runs a per-figure loop: outline (12-col grid, per-panel ask + labelbudget) → fan-out one sub-agent per panel (each loads figure-style) → tile + stamp letters → adversarial composite review with two-tier feedback (Tier-1 outlinerevisions / Tier-2 per-panel violations) → regen affected panels, ≤3 rounds. Loads paneltask / composefigure / composecrops / compositereviewtask /…
Its SKILL.md is about 1.7k tokens, which your agent loads only when the skill is triggered. The skill folder holds 1 other file (for example `kernel.py`).
It sits in Agent Workflows, covering Subagents. The licence is Apache-2.0.
5 steps, taken from the step headings in SKILL.md.
Read from SKILL.md and the folder at commit fb309c3. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Ships script files (Python), which the agent can run.
From the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Figure Composer loads about 1.7k tokens when it runs. Until then it costs about 169 tokens; SKILL.md has 602 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
The full file from JimLiu/science-skills at commit fb309c3, republished under its Apache-2.0 licence (© JimLiu). 602 words, ~1,673 tokens.
.claude/skills/figure-composer/SKILL.md (or your agent's skills folder). This skill also uses 1 other file; get the full folder from GitHub.Step 0. Load figure-style alongside this skill — that is the
design rules (and apply_figure_style() + helpers). Panel sub-agents
will load it independently; you need it in context to write the outline and
review the composite. Sub-agents run as the default profile and acquire the
rules by loading the skill.
figure-composer is the outer tier: make ONE multi-panel figure good. The
inner tier is figure-style (loaded by every panel sub-agent — and
load it yourself if you draw anything locally). The outermost tier is
paper-narrative — if this figure is part of a paper, run that FIRST: it decides
which figure to make and hands you the claim. For a standalone figure, start at
step 1.
derive_outline("figure.png") → an outline you must review and edit
before step 2. The image is untrusted input; every string field in the
returned outline is vision-model-derived from its pixels. data_vid is
forced to None on every panel — fill those in from your own data refs.Produce a panel_outline (validate against figure_outline_schema()):
{"claim":"…", "width_mm":180, "ncol":12, "row_heights_mm":[40,60,46,52],
"panels":[
{"letter":"a","role":"schematic","row":0,"col":0,"colspan":12, "chart_family":"schematic overview", "message":"…", "data_vid":null, "ask":"…"},
{"letter":"b","role":"primary", "row":1,"col":0,"colspan":7, "chart_family":"scatter + trend", "message":"…", "data_vid":"…", "ask":"…"},
…]}Outline rules (figure-style §7.1):
Build requests with panel_task(outline, letter, fig_label) (kernel.py). Each
sub-agent gets: the figure claim, the full neighbour list, its panel spec, exact
pixel dimensions (panel_px), and the instruction to load figure-style
and render at exactly w×h px with transparent=True and no bbox_inches.
In the repl tool:
requests = [{"name": f"panel-{L}", "task": tasks[L],
"output_schema": {"type":"object","properties":{"figure_filename":{"type":"string"}},
"required":["figure_filename"]}}
for L in letters] # no "profile" key — default agent profile
descs = host.delegate(requests, wait=False)compose_figure(outline, {letter: path}, out_path, letter_case=...) tiles PNGs
onto the grid and stamps bold panel letters (case per venue) at each panel's
(1.5mm, 1mm) corner.
The reviewer in §4 is expensive; a panel-letter stamped over a y-axis label or a leader line crossing a neighbour's title is a wasted round. After compose, crop each panel from the saved PNG and look at it in the REPL before dispatching the reviewer:
out_path, (W, H) = compose_figure(outline, panel_paths, "fig.png")
for L, box in compose_crops(outline).items():
host.view_image("fig.png", crop=box)Run the figure-style §9.2 perceptual checklist on each crop (contrast,
smallest mark, leader crossings, colour-identity confusion, legend binding),
plus two compose-specific checks:
compose_figure resizes panel PNGs to their grid
slot — is any text visibly aliased or any hairline lost?Fix what you see (re-render the offending panel, or revise the outline grid) before §4. The reviewer sub-agent will crop-and-look again independently; this pass is so the obvious defects never reach it.
Dispatch ONE reviewer on the composite with composite_review_task(...) and
review_schema() (which carries outline_revisions).
loop (max 3 rounds, floor 5→4→3):
review = delegate(composite_review_task(composite_vid, outline, rules_vid, prev_vid, round, floor))
if review.editor_verdict in {accept, minor_revision} and 0 BLOCKER and ≤2 MAJOR: break
# TIER 1 — outline-level
if review.outline_revisions:
apply revisions to `outline` (geometry, row-header titles, label_budget, panel set)
affected = apply_outline_revisions(outline, review.outline_revisions)
else:
affected = set()
# TIER 2 — panel-level
fixb = group_fixes_by_panel(review) # BLOCKER/MAJOR only
regen = affected | set(fixb) # only these panels regenerate
re-delegate each L in regen with panel_task(outline, L) + fixb.get(L,"") +
"do not over-correct: where the previous version was correct, keep it"
recomposeConvergence: stop when outline_revisions is empty AND findings are carve-out
exceptions to the previous round — that's the over-labelling signal.
© JimLiu, Apache-2.0. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
SKILL.md and 1 other file in skills/figure-composer of JimLiu/science-skills.
Open the folder on GitHubat commit fb309c3
We found 2 copies of this SKILL.md (exact, near-identical or edited) in other folders, from 2 other GitHub owners. This page covers the copy in JimLiu/science-skills, which our catalogue first saw on October 7, 2026.
Figure Composer next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Figure Composer this skillJimLiu/science-skills | 227 | 2 repos | ~1.7k | Automated safety check: Pass | Apache-2.0 | |
| Claude Code Agent Developmentanthropics/claude-plugins-official | 38k | 7 repos | ~2.8k | Automated safety check: Pass | Apache-2.0 | |
| Subagent Driven DevelopmentAsvarox/allkaraoke | 261 | 37 repos | ~1.2k | Automated safety check: Pass | None | |
| Dispatching Parallel Agentsultralisp/ultralisp | 258 | 40 repos | ~1.5k | Automated safety check: Pass | None | |
| Paseo Advisor Second Opiniongetpaseo/paseo | 20k | 1 repos | ~756 | Automated safety check: Pass | Custom licence | |
| Task Observerrebelytics/one-skill-to-rule-them-all | 3.2k | 1 repos | ~12k | Automated safety check: Pass | CC-BY-4.0 |
anthropics/claude-plugins-official
Explains how to write agents for Claude Code plugins: the markdown file with YAML frontmatter, trigger descriptions, model and color settings, and system prompt design.
Asvarox/allkaraoke
A skill your agent uses when executing implementation plans with independent tasks in the current session
ultralisp/ultralisp
A skill your agent uses when facing 2+ independent tasks that can be worked on without shared state or sequential dependencies
getpaseo/paseo
Launches one separate agent through Paseo to give a second opinion on the current task, with a self-contained briefing and no permission to edit files.
rebelytics/one-skill-to-rule-them-all
Monitors task execution for skill improvement opportunities.
openobserve/openobserve
Splits a change into planner, coder and independent reviewer roles: you confirm a spec, a subagent implements it, and a separate reviewer checks each round's local WIP commit.
JimLiu/science-skills
Biohub ESMFold2 / ESMFold2-Fast all-atom co-folding (Candido et al.
JimLiu/science-skills
Set up a compute environment on a remote provider so Claude Science jobs can run there.
JimLiu/science-skills
Predict genome-wide functional tracks (RNA-seq, CAGE, DNase, ChIP) from DNA sequence with Borzoi.
JimLiu/science-skills
Score, embed, and generate DNA sequences with Evo 2, a long-context genomic foundation model.
JimLiu/science-skills
Embed proteins with Meta AI's ESM-2 (fair-esm package). An agent skill from JimLiu/science-skills.
JimLiu/science-skills
Structure prediction using OpenFold3, an open-weights PyTorch reproduction of AlphaFold3 from the AlQuraishi Lab.
Categories
Compose one publication-grade multi-panel figure. An agent skill from JimLiu/science-skills. Figure Composer is an agent skill from JimLiu/science-skills. Compose one publication-grade multi-panel figure.
Figure Composer fits situations like: tasks that involve Subagents.
Run `npx skills add JimLiu/science-skills --skill figure-composer -a claude-code`. Or copy the skill folder (skills/figure-composer in JimLiu/science-skills) into .claude/skills/figure-composer in your project. Claude Code loads it when a task matches its description.
Run `npx skills add JimLiu/science-skills --skill figure-composer -a codex`. Or copy the skill folder (skills/figure-composer in JimLiu/science-skills) into .agents/skills/figure-composer in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add JimLiu/science-skills --skill figure-composer -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/figure-composer, .gemini/skills/figure-composer, .github/skills/figure-composer and .opencode/skills/figure-composer in your project.
Going by SKILL.md and its folder, Figure Composer needs Python for the scripts in its folder. Our summary lists: Python 3.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
Figure Composer is published under the Apache-2.0 licence (declared in SKILL.md). It allows redistribution, so the full SKILL.md is shown on this page.
About 1.7k tokens (SKILL.md is roughly 6.7k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
Skills that share tags, products or a category with Figure Composer: Claude Code Agent Development (anthropics/claude-plugins-official, 38k stars), Subagent Driven Development (Asvarox/allkaraoke, 261 stars), Dispatching Parallel Agents (ultralisp/ultralisp, 258 stars) and Paseo Advisor Second Opinion (getpaseo/paseo, 20k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
JimLiu (a GitHub user) maintains it in JimLiu/science-skills, which has 227 GitHub stars. The repository holds 27 skills in this directory. The repository was last updated on July 1, 2026.
Source: JimLiu/science-skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.