Peer Review
K-Dense-AI/claude-scientific-writer
Prepare evidence-bounded, constructive peer-review drafts and structured manuscript assessments.
Agent skill
Pubar Transparency And Data
by brycewang-stanford in brycewang-stanford/Awesome-Journal-Skills
A skill your agent uses when preparing the transparency / reproducibility materials for a Public Administration Review (PAR) manuscript.
Install Pubar Transparency And Data
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill pubar-transparency-and-data -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills pubar-transparency-and-data --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/Public-Administration-Review-Skills/skills/pubar-transparency-and-data .claude/skills/pubar-transparency-and-data && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "pubar-transparency-and-data" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Public-Administration-Review-Skills/skills/pubar-transparency-and-data into .claude/skills/pubar-transparency-and-data/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "pubar-transparency-and-data", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Public-Administration-Review-Skills/skills/pubar-transparency-and-dataType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill pubar-transparency-and-data -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills pubar-transparency-and-data --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .agents/skills && cp -r skills-src/Public-Administration-Review-Skills/skills/pubar-transparency-and-data .agents/skills/pubar-transparency-and-data && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "pubar-transparency-and-data" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Public-Administration-Review-Skills/skills/pubar-transparency-and-data into .agents/skills/pubar-transparency-and-data/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "pubar-transparency-and-data", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill pubar-transparency-and-data -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills pubar-transparency-and-data --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/Public-Administration-Review-Skills/skills/pubar-transparency-and-data .cursor/skills/pubar-transparency-and-data && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "pubar-transparency-and-data" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Public-Administration-Review-Skills/skills/pubar-transparency-and-data into .cursor/skills/pubar-transparency-and-data/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "pubar-transparency-and-data", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/brycewang-stanford/Awesome-Journal-Skills.git --path Public-Administration-Review-Skills/skills/pubar-transparency-and-data--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill pubar-transparency-and-data -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills pubar-transparency-and-data --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/Public-Administration-Review-Skills/skills/pubar-transparency-and-data .gemini/skills/pubar-transparency-and-data && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "pubar-transparency-and-data" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Public-Administration-Review-Skills/skills/pubar-transparency-and-data into .gemini/skills/pubar-transparency-and-data/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "pubar-transparency-and-data", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills pubar-transparency-and-dataInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill pubar-transparency-and-data -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .github/skills && cp -r skills-src/Public-Administration-Review-Skills/skills/pubar-transparency-and-data .github/skills/pubar-transparency-and-data && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "pubar-transparency-and-data" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Public-Administration-Review-Skills/skills/pubar-transparency-and-data into .github/skills/pubar-transparency-and-data/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "pubar-transparency-and-data", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill pubar-transparency-and-data -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills pubar-transparency-and-data --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/Public-Administration-Review-Skills/skills/pubar-transparency-and-data .opencode/skills/pubar-transparency-and-data && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "pubar-transparency-and-data" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Public-Administration-Review-Skills/skills/pubar-transparency-and-data into .opencode/skills/pubar-transparency-and-data/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "pubar-transparency-and-data", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
Facts
- Skill name
pubar-transparency-and-data- GitHub stars
- 1.2k
- Token cost
- ~1.9k tokens
- SKILL.md length
- 771 words
- Files
- 1
- Skills in repo
- 2,387
- Repo updated
- First seen
- Licence
- MIT
At a glance
A skill your agent uses when preparing the transparency / reproducibility materials for a Public Administration Review (PAR) manuscript.
- Works in 4 steps: Data & materials citation. Cite all… → Data sharing. PAR encourages depositing… → Reporting documentation. PAR recommends… → …
- Preparing the transparency / reproducibility materials for a Public Administration Review (PAR) manuscript
- SKILL.md covers When to trigger, What PAR's TOP standards cover…, Build-as-you-go checklist and Transparency package by…, plus 6 more sections
- Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md
What it does
Pubar Transparency And Data is an agent skill from brycewang-stanford/Awesome-Journal-Skills. Use when preparing the transparency / reproducibility materials for a Public Administration Review (PAR) manuscript. PAR is a signatory of the Center for Open Science TOP Guidelines and has adopted transparency standards (data citation, data sharing via Dataverse/QDR, reporting documentation, pre-registration). Covers quantitative and qualitative transparency and the restricted-data path. Prepares the package; it does not waive requirements.
Its SKILL.md is about 1.9k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
It sits in Research & Science, covering Reproducible research and Citation management. The repository describes itself as: Journal-specific Claude Code/Codex skill packs covering mainstream journals — AER, QJE, Nature, Cell, 管理世界, 经济研究 & 200+ more — your fast track to getting published. ｜ 覆盖主流期刊的… The licence is MIT.
When your agent uses it
- Preparing the transparency / reproducibility materials for a Public Administration Review (PAR) manuscript
- Tasks that involve Reproducible research
- Tasks that involve Citation management
Example prompts
- “/pubar-transparency-and-data”
Workflow steps
4 steps, taken from the first numbered list in SKILL.md.
- Data & materials citation. Cite all research materials and data sources used, with persistent
- Data sharing. PAR encourages depositing data in an appropriate repository — Dataverse for
- Reporting documentation. PAR recommends documenting research design, data preparation, and
- Pre-registration. Pre-registration of studies and/or analysis plans is supported, and
What it can do on your machine
Read from SKILL.md and the folder at commit 932eb23. It shows what the files ask for, not the result of running them.
Tool permissions
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Runs code
No scripts in the folder and no shell commands in SKILL.md.
From the folder's file list and the shell code blocks in SKILL.md.
Network
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Credentials
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Context cost
Pubar Transparency And Data loads about 1.9k tokens when it runs. Until then it costs about 118 tokens; SKILL.md has 771 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
Safety
Auto-check passed
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
SKILL.md
The full file from brycewang-stanford/Awesome-Journal-Skills at commit 932eb23, republished under its MIT licence (© brycewang-stanford). 771 words, ~1,870 tokens.
Download SKILL.mdSave it as
.claude/skills/pubar-transparency-and-data/SKILL.md (or your agent's skills folder).- name
- pubar-transparency-and-data
- description
- Use when preparing the transparency / reproducibility materials for a Public Administration Review (PAR) manuscript. PAR is a signatory of the Center for Open Science TOP Guidelines and has adopted transparency standards (data citation, data sharing via Dataverse/QDR, reporting documentation, pre-registration). Covers quantitative and qualitative transparency and the restricted-data path. Prepares the package; it does not waive requirements.
Transparency & Data Policy (pubar-transparency-and-data)
PAR endorses the Center for Open Science's Transparency and Openness Promotion (TOP) Guidelines and has adopted transparency standards for authors (检索于 2026-06；以官网为准). Build the materials as you go so a transparency request at review or acceptance does not stall the paper.
When to trigger
- Building the reproducibility / transparency materials and the data-availability statement
- A reviewer or editor requested data, code, or documentation
- Data cannot be fully shared (privacy, FOIA limits, agency restrictions, IRB) and you need the path
- Deciding whether to pursue pre-registration badges
What PAR's TOP standards cover (verify current wording)
- Data & materials citation. Cite all research materials and data sources used, with persistent identifiers where available — treat data as a citable research output.
- Data sharing. PAR encourages depositing data in an appropriate repository — Dataverse for quantitative data, the Qualitative Data Repository (QDR) for qualitative data — with a data-availability statement in the manuscript.
- Reporting documentation. PAR recommends documenting research design, data preparation, and analysis decisions in a supplementary document, following the relevant reporting standard where applicable (e.g., CONSORT for experiments, STROBE for observational, PRISMA for reviews, COREQ for qualitative).
- Pre-registration. Pre-registration of studies and/or analysis plans is supported, and
badges may be available — register before data collection/analysis (see
pubar-research-design).
Build-as-you-go checklist
- One master script regenerates every table and figure from raw/constructed data
- README documents data provenance, construction steps, and how to reproduce each exhibit
- Seeds set and reported for every stochastic step
- Software/package versions pinned (
renv.lock/requirements.txt/ recorded installs) - Exhibit numbers in the manuscript match the deposited output exactly
- Data-availability statement drafted (where data live, or why they cannot be shared)
- Reporting-standard supplement (CONSORT/STROBE/PRISMA/COREQ) where applicable
- Pre-registration / pre-analysis plan linked (anonymized) where applicable
Transparency package by evidence type
Build the package around the evidence product, not around a generic folder dump.
| Evidence type | Minimum package | PAR-specific risk |
|---|---|---|
| Administrative microdata | Data dictionary, construction log, access conditions, replication code, and an approved restricted-data statement if raw data cannot ship | A practitioner-facing claim with no auditable data provenance |
| Survey / experiment | Instrument, sampling frame, recruitment/consent language, randomization code, preregistration or exploratory label, and cleaning scripts | Treatments or outcomes cannot be interpreted by public managers |
| Qualitative interviews / fieldwork | Interview protocol, coding scheme, memo trail, anonymized excerpts or controlled-access deposit, and IRB/consent constraints | Over-disclosure that harms participants, or under-documentation that blocks audit |
| Case comparison / process tracing | Case-selection memo, source inventory, evidence tests, chronology, and rival-explanation log | "Illustrative" cases presented as field-wide lessons |
| Public datasets / dashboards | Persistent links, download dates, version snapshots, transformation scripts, and archived outputs | Live web data change after review and no longer reproduce the exhibits |
Show full SKILL.md (340 more words)Show less
Restricted-data decision tree
- Can raw data be public? Deposit the exact analysis data plus code in Dataverse or another persistent repository and cite it in the Data Availability Statement.
- Can de-identified analysis data be public? Deposit the de-identified data and document what was removed, masked, top-coded, aggregated, or perturbed.
- Can synthetic or toy data run the code? Provide synthetic data plus a validation note that the code path reproduces the tables/figures but not the confidential estimates.
- Can only metadata be shared? Provide a data-access route, DUA/IRB constraints, variable list, and a read-only replication log that maps each exhibit to the restricted source.
- Is nothing shareable? Treat this as an editor-facing exception request; explain why the claim is still auditable and which independent checks remain possible.
For every restricted path, separate legal/ethical inability from convenience. Convenience is not a transparency rationale.
When data cannot be shared (restricted-data path)
- Explain why the data are restricted (privacy, IRB, agency/legal restrictions, FOIA limits).
- Provide instructions on how others can obtain the data (access process, agency contact, DUA).
- Where feasible, provide synthetic data or de-identified extracts so the code can be run.
- For qualitative data, QDR supports controlled-access sharing with appropriate protections.
Reproducibility smoke test
Before submission, run a clean-room check:
- start from a fresh directory or container with only the repository/deposit files;
- install from the recorded environment file;
- run the master script end to end;
- compare every printed table/figure number against the manuscript;
- record any manual step, proprietary software dependency, or restricted-data substitution.
If the smoke test fails, do not call the package "reproducible"; report the remaining limitation honestly in the Data Availability Statement.
Anti-patterns
- Treating transparency as a post-acceptance afterthought
- Depositing code that does not actually reproduce the printed tables/figures
- A personal URL or dead link instead of a persistent repository (Dataverse/QDR)
- Claiming data are restricted with no access path or synthetic substitute
- Undocumented, un-seeded, unpinned code that "works on my machine"
Output format
【Repository】Dataverse (quant) / QDR (qual) — materials staged? [Y/N]
【Evidence type】admin / survey-experiment / qualitative / case-process / public-dataset
【Reproduces tables/figures?】master script verified locally? [Y/N]
【Documentation】README + provenance + seeds + pinned versions + reporting standard? [Y/N]
【Data-availability statement】drafted? [Y/N]
【Restricted data?】public / de-identified / synthetic / metadata-only / exception request
【Smoke test】fresh-run status + remaining manual step
【Pre-registration】badge pursued? [Y/N/NA]
【Next】pubar-review-processSupplementary resources
../../resources/external_tools.md— reproducibility tooling and qualitative-transparency options (QDR)../../resources/official-source-map.md— PAR TOP guidelines + Dataverse/QDR
© brycewang-stanford, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
Files
Just SKILL.md in Public-Administration-Review-Skills/skills/pubar-transparency-and-data of brycewang-stanford/Awesome-Journal-Skills.
Open the folder on GitHubat commit 932eb23
Compare with similar skills
Pubar Transparency And Data next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Pubar Transparency And Data this skillbrycewang-stanford/Awesome-Journal-Skills | 1.2k | — | ~1.9k | Automated safety check: Pass | MIT | |
| Peer ReviewK-Dense-AI/claude-scientific-writer | 2.4k | 2 repos | ~3.1k | Automated safety check: Notes | MIT | |
| Bump Versionsbactopia/bactopia | 522 | — | ~1.3k | Automated safety check: Pass | MIT | |
| Literature ReviewK-Dense-AI/scientific-agent-skills | 48k | 1 repos | ~3.2k | Automated safety check: Notes | MIT | |
| Lit SynthesizerClawBio/ClawBio | 1.2k | 1 repos | ~2.5k | Automated safety check: Pass | MIT | |
| Hwb Reference Appendix Checkerxieyouxixi/hwb-math-modeling-skills | 197 | — | ~534 | Automated safety check: Pass | None |
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Categories
Questions about Pubar Transparency And Data
What does Pubar Transparency And Data do?
A skill your agent uses when preparing the transparency / reproducibility materials for a Public Administration Review (PAR) manuscript. Pubar Transparency And Data is an agent skill from brycewang-stanford/Awesome-Journal-Skills. Use when preparing the transparency / reproducibility materials for a Public Administration Review (PAR) manuscript.
When should I use Pubar Transparency And Data?
Pubar Transparency And Data fits situations like: preparing the transparency / reproducibility materials for a Public Administration Review (PAR) manuscript; tasks that involve Reproducible research; tasks that involve Citation management.
How do I install Pubar Transparency And Data in Claude Code?
Run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill pubar-transparency-and-data -a claude-code`. Or copy the skill folder (Public-Administration-Review-Skills/skills/pubar-transparency-and-data in brycewang-stanford/Awesome-Journal-Skills) into .claude/skills/pubar-transparency-and-data in your project. Claude Code loads it when a task matches its description.
How do I install Pubar Transparency And Data in Codex?
Run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill pubar-transparency-and-data -a codex`. Or copy the skill folder (Public-Administration-Review-Skills/skills/pubar-transparency-and-data in brycewang-stanford/Awesome-Journal-Skills) into .agents/skills/pubar-transparency-and-data in your project. Codex loads it when a task matches its description.
Can I use Pubar Transparency And Data in Cursor, Gemini CLI or GitHub Copilot?
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill pubar-transparency-and-data -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/pubar-transparency-and-data, .gemini/skills/pubar-transparency-and-data, .github/skills/pubar-transparency-and-data and .opencode/skills/pubar-transparency-and-data in your project.
What does Pubar Transparency And Data need to run?
SKILL.md names no scripts, command-line tools or credentials: Pubar Transparency And Data is instructions for the agent only.
Does Pubar Transparency And Data access the network?
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Is Pubar Transparency And Data safe to install?
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
What licence does Pubar Transparency And Data use?
Pubar Transparency And Data is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
How many tokens does Pubar Transparency And Data use?
About 1.9k tokens (SKILL.md is roughly 7.5k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
What are the alternatives to Pubar Transparency And Data?
Skills that share tags, products or a category with Pubar Transparency And Data: Peer Review (K-Dense-AI/claude-scientific-writer, 2.4k stars), Bump Versions (bactopia/bactopia, 522 stars), Literature Review (K-Dense-AI/scientific-agent-skills, 48k stars) and Lit Synthesizer (ClawBio/ClawBio, 1.2k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
Who maintains Pubar Transparency And Data?
brycewang-stanford (a GitHub user) maintains it in brycewang-stanford/Awesome-Journal-Skills, which has 1,228 GitHub stars. The repository holds 2,387 skills in this directory. The repository was last updated on September 27, 2026.
Source: brycewang-stanford/Awesome-Journal-Skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.