Hypothesis Generation
spacering-net/codeg
Structured hypothesis formulation from observations. An agent skill from spacering-net/codeg.
A skill your agent uses when targeting JAMA Surgery or deciding whether a surgical-outcomes or surgical-trial study fits this venue.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill jama-surgery -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills jama-surgery --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/Clinical-Medicine-Journal-Skills/skills/jama-surgery .claude/skills/jama-surgery && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "jama-surgery" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Clinical-Medicine-Journal-Skills/skills/jama-surgery into .claude/skills/jama-surgery/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "jama-surgery", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Clinical-Medicine-Journal-Skills/skills/jama-surgeryType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill jama-surgery -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills jama-surgery --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .agents/skills && cp -r skills-src/Clinical-Medicine-Journal-Skills/skills/jama-surgery .agents/skills/jama-surgery && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "jama-surgery" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Clinical-Medicine-Journal-Skills/skills/jama-surgery into .agents/skills/jama-surgery/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "jama-surgery", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill jama-surgery -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills jama-surgery --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/Clinical-Medicine-Journal-Skills/skills/jama-surgery .cursor/skills/jama-surgery && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "jama-surgery" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Clinical-Medicine-Journal-Skills/skills/jama-surgery into .cursor/skills/jama-surgery/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "jama-surgery", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/brycewang-stanford/Awesome-Journal-Skills.git --path Clinical-Medicine-Journal-Skills/skills/jama-surgery--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill jama-surgery -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills jama-surgery --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/Clinical-Medicine-Journal-Skills/skills/jama-surgery .gemini/skills/jama-surgery && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "jama-surgery" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Clinical-Medicine-Journal-Skills/skills/jama-surgery into .gemini/skills/jama-surgery/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "jama-surgery", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills jama-surgeryInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill jama-surgery -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .github/skills && cp -r skills-src/Clinical-Medicine-Journal-Skills/skills/jama-surgery .github/skills/jama-surgery && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "jama-surgery" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Clinical-Medicine-Journal-Skills/skills/jama-surgery into .github/skills/jama-surgery/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "jama-surgery", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill jama-surgery -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install brycewang-stanford/Awesome-Journal-Skills jama-surgery --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/Clinical-Medicine-Journal-Skills/skills/jama-surgery .opencode/skills/jama-surgery && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "jama-surgery" agent skill from https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Clinical-Medicine-Journal-Skills/skills/jama-surgery into .opencode/skills/jama-surgery/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "jama-surgery", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
jama-surgeryA skill your agent uses when targeting JAMA Surgery or deciding whether a surgical-outcomes or surgical-trial study fits this venue.
Jama Surgery is an agent skill from brycewang-stanford/Awesome-Journal-Skills. Use when targeting JAMA Surgery or deciding whether a surgical-outcomes or surgical-trial study fits this venue. Encodes the journal's fit, the surgical-trial and perioperative evidence bar, surgical-reporting challenges, reporting-guideline and trial-registration requirements, JAMA Network house style, official-submission re-check, and desk-reject heuristics. Venue-fit aid only, not clinical advice.
Its SKILL.md is about 1.9k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
It sits in Research & Science. The repository describes itself as: Journal-specific Claude Code/Codex skill packs covering mainstream journals — AER, QJE, Nature, Cell, 管理世界, 经济研究 & 200+ more — your fast track to getting published. | 覆盖主流期刊的… The licence is MIT.
Read from SKILL.md and the folder at commit 932eb23. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
No scripts in the folder and no shell commands in SKILL.md.
From the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Jama Surgery loads about 1.9k tokens when it runs. Until then it costs about 104 tokens; SKILL.md has 763 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
The full file from brycewang-stanford/Awesome-Journal-Skills at commit 932eb23, republished under its MIT licence (© brycewang-stanford). 763 words, ~1,944 tokens.
.claude/skills/jama-surgery/SKILL.md (or your agent's skills folder).JAMA Surgery is a JAMA Network specialty journal for surgical clinical research across general, vascular, thoracic, transplant, trauma, and surgical-subspecialty practice. It favors rigorous, practice-relevant work — randomized and well-designed surgical trials, large surgical-outcomes and registry analyses, perioperative and quality-improvement research, and comparative-effectiveness studies — with JAMA's emphasis on patient- centered outcomes, adequate risk adjustment, and direct relevance to surgical care. Single-surgeon case series, descriptive technique reports without comparative outcomes, and underpowered studies are a weak fit. This skill is a fit / venue-selection / re-framing aid; it is not clinical or regulatory advice and does not replace the journal's current instructions for authors. Before submitting, re-check the live JAMA Surgery author instructions.
../../resources/source-basis.md and
../../resources/official-source-map.md; start from the ICMJE and JAMA Network
anchors, then cite the current JAMA Surgery page you checked.jama / NEJM / The Lancet in the natural-science bundle).jama-oncology / annals-of-oncology.jama-cardiology.jama-neurology / stroke / brain.jama-internal-medicine.[Fit] High / Medium / Low (one-line reason)
[Target] JAMA Surgery
[Specialty tags] <2–3 closest surgical topics>
[Study design / reporting guideline] <RCT-CONSORT / registry-STROBE / review-PRISMA / innovation-IDEAL>
[Method/evidence] <does outcome choice, risk adjustment, blinding/learning-curve, and registration clear the bar?>
[Top risk] <the single most likely reason for rejection>
[Official items to re-check] <article type / registration / checklist / standardization / ethics / disclosures>
[Re-route suggestion] <if not a fit, a better-matched venue>© brycewang-stanford, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
Just SKILL.md in Clinical-Medicine-Journal-Skills/skills/jama-surgery of brycewang-stanford/Awesome-Journal-Skills.
Open the folder on GitHubat commit 932eb23
Jama Surgery next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Jama Surgery this skillbrycewang-stanford/Awesome-Journal-Skills | 1.2k | — | ~1.9k | Automated safety check: Pass | MIT | |
| Hypothesis Generationspacering-net/codeg | 3.9k | 14 repos | ~3.6k | Automated safety check: Notes | MIT | |
| GitHub Deep Researchbytedance/deer-flow | 84k | 4 repos | ~1.3k | Automated safety check: Pass | MIT | |
| Nature Paper CardYuan1z0825/nature-skills | 47k | 2 repos | ~2.1k | Automated safety check: Pass | Apache-2.0 | |
| Content Research Writerweapp-tailwindcss/weapp-tailwindcss | 1.9k | 25 repos | ~3.5k | Automated safety check: Pass | MIT | |
| Last30daysmvanhorn/last30days-skill | 64k | — | ~7.9k | Automated safety check: Notes | MIT |
spacering-net/codeg
Structured hypothesis formulation from observations. An agent skill from spacering-net/codeg.
bytedance/deer-flow
Researches a GitHub repository over four rounds using the GitHub API and web search, then writes a structured markdown report with timeline, metrics and Mermaid diagrams.
Yuan1z0825/nature-skills
Builds a structured deep-reading card for one scientific paper, covering methods, how experiments support claims, limitations and research ideas, with a script to prepare the source.
weapp-tailwindcss/weapp-tailwindcss
Assists in writing high-quality content by conducting research, adding citations, improving hooks, iterating on outlines, and providing real-time feedback on each section.
mvanhorn/last30days-skill
Research what people actually say about any topic in the last 30 days.
spacering-net/codeg
Structured manuscript/grant review with checklist-based evaluation.
brycewang-stanford/Awesome-Journal-Skills
A skill your agent uses when running and reporting the analysis for an Annals of the American Association of Geographers manuscript — spatial statistics and modeling, remote-sensing accuracy, or…
brycewang-stanford/Awesome-Journal-Skills
A skill your agent uses when positioning an Annals of the American Association of Geographers manuscript in the literature — engaging geographic scholarship across the relevant area and the…
brycewang-stanford/Awesome-Journal-Skills
A skill your agent uses when responding to an Annals of the American Association of Geographers decision letter (major/minor revision) — building a point-by-point response to the subject editor and…
brycewang-stanford/Awesome-Journal-Skills
A skill your agent uses when defending the research design of an Annals of the American Association of Geographers manuscript — spatial/quantitative analysis and GIScience, remote-sensing and…
brycewang-stanford/Awesome-Journal-Skills
A skill your agent uses when you need to understand how the Annals of the American Association of Geographers evaluates a manuscript — double-anonymous review routed through a subject editor by…
brycewang-stanford/Awesome-Journal-Skills
A skill your agent uses when running the final pre-submission preflight for the Annals of the American Association of Geographers via ScholarOne Manuscripts — area/article-type selection…
Categories
A skill your agent uses when targeting JAMA Surgery or deciding whether a surgical-outcomes or surgical-trial study fits this venue. Jama Surgery is an agent skill from brycewang-stanford/Awesome-Journal-Skills. Use when targeting JAMA Surgery or deciding whether a surgical-outcomes or surgical-trial study fits this venue.
Jama Surgery fits situations like: targeting JAMA Surgery; deciding whether a surgical-outcomes; surgical-trial study fits this venue.
Run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill jama-surgery -a claude-code`. Or copy the skill folder (Clinical-Medicine-Journal-Skills/skills/jama-surgery in brycewang-stanford/Awesome-Journal-Skills) into .claude/skills/jama-surgery in your project. Claude Code loads it when a task matches its description.
Run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill jama-surgery -a codex`. Or copy the skill folder (Clinical-Medicine-Journal-Skills/skills/jama-surgery in brycewang-stanford/Awesome-Journal-Skills) into .agents/skills/jama-surgery in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill jama-surgery -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/jama-surgery, .gemini/skills/jama-surgery, .github/skills/jama-surgery and .opencode/skills/jama-surgery in your project.
SKILL.md names no scripts, command-line tools or credentials: Jama Surgery is instructions for the agent only.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
Jama Surgery is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
About 1.9k tokens (SKILL.md is roughly 7.8k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
Skills that share tags, products or a category with Jama Surgery: Hypothesis Generation (spacering-net/codeg, 3.9k stars), GitHub Deep Research (bytedance/deer-flow, 84k stars), Nature Paper Card (Yuan1z0825/nature-skills, 47k stars) and Content Research Writer (weapp-tailwindcss/weapp-tailwindcss, 1.9k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
brycewang-stanford (a GitHub user) maintains it in brycewang-stanford/Awesome-Journal-Skills, which has 1,231 GitHub stars. The repository holds 2,387 skills in this directory. The repository was last updated on September 27, 2026.
Source: brycewang-stanford/Awesome-Journal-Skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.