A skill your agent uses when targeting JAMA Surgery or deciding whether a surgical-outcomes or surgical-trial study fits this venue.

MITAuto-check passedResearch & Science

Install Jama Surgery

skills CLI
$ npx skills add brycewang-stanford/Awesome-Journal-Skills --skill jama-surgery -a claude-code

Project install by default; add -g for ~/.claude/skills/.

GitHub CLI
$ gh skill install brycewang-stanford/Awesome-Journal-Skills jama-surgery --agent claude-code

Project scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).

Manual copy
$ git clone --depth 1 https://github.com/brycewang-stanford/Awesome-Journal-Skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/Clinical-Medicine-Journal-Skills/skills/jama-surgery .claude/skills/jama-surgery && rm -rf skills-src

Use ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.

Claude Code skills documentation · loads skills from .claude/skills/

Facts

Skill name
jama-surgery
GitHub stars
1.2k
Token cost
~1.9k tokens
SKILL.md length
763 words
Files
1
Skills in repo
2,387
Repo updated
First seen
Licence
MIT

At a glance

A skill your agent uses when targeting JAMA Surgery or deciding whether a surgical-outcomes or surgical-trial study fits this venue.

  • Targeting JAMA Surgery
  • SKILL.md covers Journal positioning, When to trigger, Scope & topic fit and Method & evidence bar, plus 6 more sections
  • Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md
  • Deciding whether a surgical-outcomes

What it does

Jama Surgery is an agent skill from brycewang-stanford/Awesome-Journal-Skills. Use when targeting JAMA Surgery or deciding whether a surgical-outcomes or surgical-trial study fits this venue. Encodes the journal's fit, the surgical-trial and perioperative evidence bar, surgical-reporting challenges, reporting-guideline and trial-registration requirements, JAMA Network house style, official-submission re-check, and desk-reject heuristics. Venue-fit aid only, not clinical advice.

Its SKILL.md is about 1.9k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.

It sits in Research & Science. The repository describes itself as: Journal-specific Claude Code/Codex skill packs covering mainstream journals — AER, QJE, Nature, Cell, 管理世界, 经济研究 & 200+ more — your fast track to getting published. | 覆盖主流期刊的… The licence is MIT.

When your agent uses it

  • Targeting JAMA Surgery
  • Deciding whether a surgical-outcomes
  • Surgical-trial study fits this venue

Example prompts

  • “/jama-surgery”

What it can do on your machine

Read from SKILL.md and the folder at commit 932eb23. It shows what the files ask for, not the result of running them.

  • Tool permissions

    Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.

    From allowed-tools in the SKILL.md frontmatter.

  • Runs code

    No scripts in the folder and no shell commands in SKILL.md.

    From the folder's file list and the shell code blocks in SKILL.md.

  • Network

    No URLs in SKILL.md.

    From URLs in SKILL.md, links to its own repository left out.

  • Credentials

    Names no API keys, tokens, secrets or passwords.

    From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.

Context cost

Jama Surgery loads about 1.9k tokens when it runs. Until then it costs about 104 tokens; SKILL.md has 763 words of instructions outside code blocks.

Always · name and description, kept in context so the agent knows when to use it
~104
When it runs · the whole SKILL.md, loaded when a task matches
~1.9k

Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.

Safety

Auto-check passed

The automated check found no risky patterns in SKILL.md.

Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.

SKILL.md

The full file from brycewang-stanford/Awesome-Journal-Skills at commit 932eb23, republished under its MIT licence (© brycewang-stanford). 763 words, ~1,944 tokens.

Download SKILL.mdSave it as .claude/skills/jama-surgery/SKILL.md (or your agent's skills folder).
name
jama-surgery
description
Use when targeting JAMA Surgery or deciding whether a surgical-outcomes or surgical-trial study fits this venue. Encodes the journal's fit, the surgical-trial and perioperative evidence bar, surgical-reporting challenges, reporting-guideline and trial-registration requirements, JAMA Network house style, official-submission re-check, and desk-reject heuristics. Venue-fit aid only, not clinical advice.

JAMA Surgery (jama-surgery)

Journal positioning

JAMA Surgery is a JAMA Network specialty journal for surgical clinical research across general, vascular, thoracic, transplant, trauma, and surgical-subspecialty practice. It favors rigorous, practice-relevant work — randomized and well-designed surgical trials, large surgical-outcomes and registry analyses, perioperative and quality-improvement research, and comparative-effectiveness studies — with JAMA's emphasis on patient- centered outcomes, adequate risk adjustment, and direct relevance to surgical care. Single-surgeon case series, descriptive technique reports without comparative outcomes, and underpowered studies are a weak fit. This skill is a fit / venue-selection / re-framing aid; it is not clinical or regulatory advice and does not replace the journal's current instructions for authors. Before submitting, re-check the live JAMA Surgery author instructions.

When to trigger

  • The author names JAMA Surgery for a surgical trial, outcomes, or perioperative study and wants a fit/framing check.
  • A surgical study must be re-framed around a comparative, patient-centered outcome with appropriate risk adjustment for a practicing-surgery audience.
  • The author is choosing between JAMA Surgery, JAMA, and a surgical-subspecialty journal.
  • The author needs the journal's surgical-trial reporting, registration, and desk-reject expectations.

Scope & topic fit

  • Randomized and pragmatic surgical trials (operative vs. nonoperative, technique vs. technique, or perioperative interventions) with patient-centered outcomes.
  • Large surgical-outcomes, registry, and claims analyses (e.g., NSQIP-style) with robust risk adjustment for case mix.
  • Perioperative, enhanced-recovery, anesthesia-surgery interface, and surgical-safety research.
  • Comparative-effectiveness and value-of-surgery studies, including de-implementation of low-value operations.
  • Surgical quality, volume-outcome, disparities, and health-services research.
  • Systematic reviews and meta-analyses answering a focused surgical question.

Method & evidence bar

  • Studies must use patient-centered outcomes (mortality, complications graded by a standard scheme, function, quality of life) with adequate risk adjustment; technical success alone is insufficient.
  • The applicable reporting guideline and checklist are required: CONSORT for trials, STROBE for observational studies, PRISMA for systematic reviews; surgical-innovation work should engage IDEAL-framework stages where relevant.
  • Surgical-trial reporting challenges must be addressed explicitly: blinding is often impossible (state who was blinded — patients, assessors, analysts), the learning curve and surgeon/center experience must be reported, and the intervention must be standardized and described reproducibly.
  • Trials require prospective registration; registration number, protocol, and statistical-analysis plan are expected.
  • Observational/registry claims must address confounding by indication, selection bias, and clustering by surgeon/center; causal language must match the design.
  • Volume-outcome and center-effect analyses need appropriate multilevel modeling.

Structure & house style

  • JAMA Network format with a structured abstract and a Key Points box; re-check current article types (Original Investigation, Brief Report, Research Letter, etc.) and limits on the live guide.
  • The introduction frames a focused, practice-relevant surgical question; the discussion states the clinical implication and net benefit/harm plainly.
  • Tables/figures follow JAMA Network statistical-reporting standards; CONSORT/STROBE flow diagrams, complication tables, and risk-adjusted outcome figures are expected where applicable.
  • Supplements carry the protocol, SAP, intervention standardization details, and additional analyses.
Show full SKILL.md (309 more words)Show less

Official-submission checklist

  • Before giving submission-ready advice, read ../../resources/source-basis.md and ../../resources/official-source-map.md; start from the ICMJE and JAMA Network anchors, then cite the current JAMA Surgery page you checked.
  • Search the live site for "JAMA Surgery instructions for authors" and follow the current version.
  • Re-check article types and word/reference/table limits, structured-abstract and Key Points format, and the JAMA Network statistical-reporting requirements.
  • Confirm trial registration, the reporting checklist (CONSORT/STROBE/PRISMA), the data-sharing statement, and protocol/SAP submission.
  • Re-check IRB/ethics and consent statements, ICMJE disclosures (including device/industry ties), funding, and AI-use disclosure.
  • If the live official instructions conflict with this skill, the official instructions win.

Pre-submission self-check

  • The study answers a practice-relevant surgical question with a comparative, patient-centered outcome and adequate risk adjustment.
  • Blinding, the learning curve, and surgeon/center experience are reported; the intervention is standardized and reproducibly described.
  • The correct reporting checklist (CONSORT/STROBE/PRISMA) is completed and attached; complications are graded by a standard scheme.
  • Trials are prospectively registered with the number in the manuscript; protocol/SAP provided.
  • Confounding by indication, selection bias, and surgeon/center clustering are addressed; causal language matches the design.
  • IRB/consent, ICMJE disclosures (including device ties), and a data-sharing statement are prepared.

Common desk-reject triggers

  • Single-surgeon or single-center case series and technique reports with no comparator or risk adjustment.
  • Outcomes reported as technical success only, without complications, function, or patient-centered endpoints.
  • Surgical trials that ignore blinding, the learning curve, or intervention standardization.
  • Registry analyses with confounding by indication or unaddressed surgeon/center clustering and overstated causal claims.
  • Missing trial registration, protocol, or the required reporting checklist.
  • Narrow surgical-subspecialty interest better served by a subspecialty journal.

Re-routing decision

  • Broadly practice-changing, top-tier surgical trial → general medicine (jama / NEJM / The Lancet in the natural-science bundle).
  • Surgical-oncology with a cancer-endpoint center of gravity → jama-oncology / annals-of-oncology.
  • Cardiac/cardiovascular surgical outcomes tied to cardiology endpoints → jama-cardiology.
  • Neurosurgical/cerebrovascular focus → jama-neurology / stroke / brain.
  • General internal-medicine or perioperative-medicine relevance over surgery → jama-internal-medicine.

Output format

text
[Fit] High / Medium / Low (one-line reason)
[Target] JAMA Surgery
[Specialty tags] <2–3 closest surgical topics>
[Study design / reporting guideline] <RCT-CONSORT / registry-STROBE / review-PRISMA / innovation-IDEAL>
[Method/evidence] <does outcome choice, risk adjustment, blinding/learning-curve, and registration clear the bar?>
[Top risk] <the single most likely reason for rejection>
[Official items to re-check] <article type / registration / checklist / standardization / ethics / disclosures>
[Re-route suggestion] <if not a fit, a better-matched venue>

© brycewang-stanford, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file

Files

Just SKILL.md in Clinical-Medicine-Journal-Skills/skills/jama-surgery of brycewang-stanford/Awesome-Journal-Skills.

Open the folder on GitHubat commit 932eb23

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Questions about Jama Surgery

What does Jama Surgery do?

A skill your agent uses when targeting JAMA Surgery or deciding whether a surgical-outcomes or surgical-trial study fits this venue. Jama Surgery is an agent skill from brycewang-stanford/Awesome-Journal-Skills. Use when targeting JAMA Surgery or deciding whether a surgical-outcomes or surgical-trial study fits this venue.

When should I use Jama Surgery?

Jama Surgery fits situations like: targeting JAMA Surgery; deciding whether a surgical-outcomes; surgical-trial study fits this venue.

How do I install Jama Surgery in Claude Code?

Run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill jama-surgery -a claude-code`. Or copy the skill folder (Clinical-Medicine-Journal-Skills/skills/jama-surgery in brycewang-stanford/Awesome-Journal-Skills) into .claude/skills/jama-surgery in your project. Claude Code loads it when a task matches its description.

How do I install Jama Surgery in Codex?

Run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill jama-surgery -a codex`. Or copy the skill folder (Clinical-Medicine-Journal-Skills/skills/jama-surgery in brycewang-stanford/Awesome-Journal-Skills) into .agents/skills/jama-surgery in your project. Codex loads it when a task matches its description.

Can I use Jama Surgery in Cursor, Gemini CLI or GitHub Copilot?

Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add brycewang-stanford/Awesome-Journal-Skills --skill jama-surgery -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/jama-surgery, .gemini/skills/jama-surgery, .github/skills/jama-surgery and .opencode/skills/jama-surgery in your project.

What does Jama Surgery need to run?

SKILL.md names no scripts, command-line tools or credentials: Jama Surgery is instructions for the agent only.

Does Jama Surgery access the network?

SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.

Is Jama Surgery safe to install?

Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.

What licence does Jama Surgery use?

Jama Surgery is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.

How many tokens does Jama Surgery use?

About 1.9k tokens (SKILL.md is roughly 7.8k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.

What are the alternatives to Jama Surgery?

Skills that share tags, products or a category with Jama Surgery: Hypothesis Generation (spacering-net/codeg, 3.9k stars), GitHub Deep Research (bytedance/deer-flow, 84k stars), Nature Paper Card (Yuan1z0825/nature-skills, 47k stars) and Content Research Writer (weapp-tailwindcss/weapp-tailwindcss, 1.9k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.

Who maintains Jama Surgery?

brycewang-stanford (a GitHub user) maintains it in brycewang-stanford/Awesome-Journal-Skills, which has 1,231 GitHub stars. The repository holds 2,387 skills in this directory. The repository was last updated on September 27, 2026.

Source: brycewang-stanford/Awesome-Journal-Skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.