Hypothesis Generation
spacering-net/codeg
Structured hypothesis formulation from observations. An agent skill from spacering-net/codeg.
Extracts concrete unmet clinical needs from guidelines, reviews, real-world studies, and clinical-practice evidence.
$ npx skills add aipoch/medical-research-skills --skill unmet-clinical-need-extractor -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install aipoch/medical-research-skills unmet-clinical-need-extractor --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/'awesome-med-research-skills/Evidence Insight/unmet-clinical-need-extractor' .claude/skills/unmet-clinical-need-extractor && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "unmet-clinical-need-extractor" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/awesome-med-research-skills/Evidence%20Insight/unmet-clinical-need-extractor into .claude/skills/unmet-clinical-need-extractor/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "unmet-clinical-need-extractor", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/aipoch/medical-research-skills/tree/main/awesome-med-research-skills/Evidence%20Insight/unmet-clinical-need-extractorType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add aipoch/medical-research-skills --skill unmet-clinical-need-extractor -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install aipoch/medical-research-skills unmet-clinical-need-extractor --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .agents/skills && cp -r skills-src/'awesome-med-research-skills/Evidence Insight/unmet-clinical-need-extractor' .agents/skills/unmet-clinical-need-extractor && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "unmet-clinical-need-extractor" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/awesome-med-research-skills/Evidence%20Insight/unmet-clinical-need-extractor into .agents/skills/unmet-clinical-need-extractor/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "unmet-clinical-need-extractor", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add aipoch/medical-research-skills --skill unmet-clinical-need-extractor -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install aipoch/medical-research-skills unmet-clinical-need-extractor --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/'awesome-med-research-skills/Evidence Insight/unmet-clinical-need-extractor' .cursor/skills/unmet-clinical-need-extractor && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "unmet-clinical-need-extractor" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/awesome-med-research-skills/Evidence%20Insight/unmet-clinical-need-extractor into .cursor/skills/unmet-clinical-need-extractor/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "unmet-clinical-need-extractor", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/aipoch/medical-research-skills.git --path 'awesome-med-research-skills/Evidence Insight/unmet-clinical-need-extractor'--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add aipoch/medical-research-skills --skill unmet-clinical-need-extractor -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install aipoch/medical-research-skills unmet-clinical-need-extractor --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/'awesome-med-research-skills/Evidence Insight/unmet-clinical-need-extractor' .gemini/skills/unmet-clinical-need-extractor && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "unmet-clinical-need-extractor" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/awesome-med-research-skills/Evidence%20Insight/unmet-clinical-need-extractor into .gemini/skills/unmet-clinical-need-extractor/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "unmet-clinical-need-extractor", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install aipoch/medical-research-skills unmet-clinical-need-extractorInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add aipoch/medical-research-skills --skill unmet-clinical-need-extractor -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .github/skills && cp -r skills-src/'awesome-med-research-skills/Evidence Insight/unmet-clinical-need-extractor' .github/skills/unmet-clinical-need-extractor && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "unmet-clinical-need-extractor" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/awesome-med-research-skills/Evidence%20Insight/unmet-clinical-need-extractor into .github/skills/unmet-clinical-need-extractor/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "unmet-clinical-need-extractor", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add aipoch/medical-research-skills --skill unmet-clinical-need-extractor -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install aipoch/medical-research-skills unmet-clinical-need-extractor --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/'awesome-med-research-skills/Evidence Insight/unmet-clinical-need-extractor' .opencode/skills/unmet-clinical-need-extractor && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "unmet-clinical-need-extractor" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/awesome-med-research-skills/Evidence%20Insight/unmet-clinical-need-extractor into .opencode/skills/unmet-clinical-need-extractor/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "unmet-clinical-need-extractor", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
unmet-clinical-need-extractorExtracts concrete unmet clinical needs from guidelines, reviews, real-world studies, and clinical-practice evidence.
Unmet Clinical Need Extractor is an agent skill from aipoch/medical-research-skills. Extracts concrete unmet clinical needs from guidelines, reviews, real-world studies, and clinical-practice evidence. Use this skill when a user wants to turn broad medical research value into specific clinical pain points such as weak early detection, poor risk stratification, treatment-response heterogeneity, monitoring gaps, diagnostic delay, undertreatment, overtreatment, or implementation failure. Always ground unmet-need claims in retrieved evidence and distinguish true care gaps from generic statements of…
Its SKILL.md is about 3.9k tokens, which your agent loads only when the skill is triggered. The skill folder holds 9 other files, including reference files (for example `eval_report_unmet-clinical-need-extractor_result.json`, `references/clinical-need-unit-framework.md` and `references/evidence-source-hierarchy.md`).
It sits in Research & Science. The repository describes itself as: Hundreds of agent skills for medical research, including protocol design, data analysis, evidence insights, and academic writing. The licence is MIT.
8 steps, taken from the step headings in SKILL.md.
Read from SKILL.md and the folder at commit 686e09d. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
No scripts in the folder and no shell commands in SKILL.md.
From the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Unmet Clinical Need Extractor loads about 3.9k tokens when it runs, and up to ~6.2k if it reads all its reference files. Until then it costs about 140 tokens; SKILL.md has 1,906 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
The full file from aipoch/medical-research-skills at commit 686e09d, republished under its MIT licence (© aipoch). 1,906 words, ~3,883 tokens.
.claude/skills/unmet-clinical-need-extractor/SKILL.md (or your agent's skills folder). This skill also uses 8 other files; get the full folder from GitHub.You are an expert biomedical research analyst for unmet clinical need extraction, clinical pain-point framing, and research-value grounding.
Task: Generate a structured, evidence-aware unmet-clinical-need map for a disease area, patient journey, care pathway, treatment context, biomarker-use case, or management problem.
This skill is for users who want to understand:
This is not a generic disease overview and not a broad “why this topic matters” writing aid. The goal is to extract and organize specific unmet clinical needs into a usable clinical-value map.
The references/ directory defines the operational standard for this skill and must be actively used during execution.
Use the reference modules as follows:
references/clinical-need-unit-framework.md → use when defining the exact clinical need unit in Section A.references/patient-journey-framework.md → use when locating unmet needs across screening, diagnosis, stratification, treatment selection, response assessment, monitoring, relapse management, and survivorship in Sections B–E.references/unmet-need-type-framework.md → use when classifying unmet-need types in Sections C–F.references/evidence-source-hierarchy.md → use when prioritizing guidelines, consensus documents, reviews, real-world evidence, registries, and original studies in Sections B–D.references/need-strength-rules.md → use when deciding whether an unmet need is strongly established, partially supported, context-dependent, or weakly supported in Sections C–F.references/translation-linkage-rules.md → use when converting clinical need into research-value framing in Sections F–H.references/output-section-guidance.md → use as the section-level formatting and content control standard for Sections A–I.If the output does not visibly reflect these modules, the result should be treated as incomplete.
Valid input: [disease area / care problem / treatment context / biomarker-use case / clinical workflow stage] + [request to identify unmet clinical needs / clinical pain points / where current care is insufficient]
Optional additions:
Examples:
Out-of-scope — respond with the redirect below and stop:
“This skill extracts unmet clinical needs at the disease, pathway, or care-workflow level. Your request ([restatement]) requires patient-specific guidance, broad disease education, or unsupported market-style claims, which are outside its scope.”
This skill should:
This skill should not:
Identify and restate:
If the input is too broad, narrow it before formal extraction. State assumptions explicitly.
Retrieve evidence relevant to real clinical unmet need before formal judgment.
Prioritize:
Do not rely on disease burden language alone. Look for explicit or strongly inferable clinical pain points.
Locate where current care underperforms across the pathway, such as:
Keep this structured rather than narrative.
Classify each unmet need by type, such as:
Do not merge clinically distinct gaps into one generic statement.
For each candidate unmet need, judge whether it is:
Then specify why:
Distinguish:
Do not allow “better biomarkers are needed” or “precision medicine is important” to stand as sufficient extraction.
Translate the validated unmet needs into research-value language.
Identify:
Before finalizing, check:
Use a structured format to show where along the patient journey unmet needs are concentrated.
Include:
Use a table only when multiple journey-stage comparisons materially improve clarity.
For each major unmet need include:
Use a table when parallel comparison improves decision quality.
Summarize:
Identify the highest-priority unmet needs.
For each include:
Explain how the strongest unmet need(s) can support research framing, such as:
Do not overstate translational readiness.
Provide the strongest clinically grounded framing for the user’s likely research direction.
This should state:
State briefly:
Provide a references section whenever sources are available.
Prefer:
Never fabricate references, PMIDs, DOIs, guideline status, or claims of clinical endorsement.
This skill should not:
A high-quality output from this skill should make a clinician-scientist or translational researcher say:
© aipoch, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
SKILL.md and 8 other files (references) in awesome-med-research-skills/Evidence Insight/unmet-clinical-need-extractor of aipoch/medical-research-skills.
Open the folder on GitHubat commit 686e09d
Unmet Clinical Need Extractor next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Unmet Clinical Need Extractor this skillaipoch/medical-research-skills | 1.9k | — | ~3.9k | Automated safety check: Pass | MIT | |
| Hypothesis Generationspacering-net/codeg | 3.9k | 14 repos | ~3.6k | Automated safety check: Notes | MIT | |
| GitHub Deep Researchbytedance/deer-flow | 84k | 4 repos | ~1.3k | Automated safety check: Pass | MIT | |
| Nature Paper CardYuan1z0825/nature-skills | 47k | 2 repos | ~2.1k | Automated safety check: Pass | Apache-2.0 | |
| Content Research Writerweapp-tailwindcss/weapp-tailwindcss | 1.9k | 25 repos | ~3.5k | Automated safety check: Pass | MIT | |
| Last30daysmvanhorn/last30days-skill | 64k | — | ~7.9k | Automated safety check: Notes | MIT |
spacering-net/codeg
Structured hypothesis formulation from observations. An agent skill from spacering-net/codeg.
bytedance/deer-flow
Researches a GitHub repository over four rounds using the GitHub API and web search, then writes a structured markdown report with timeline, metrics and Mermaid diagrams.
Yuan1z0825/nature-skills
Builds a structured deep-reading card for one scientific paper, covering methods, how experiments support claims, limitations and research ideas, with a script to prepare the source.
weapp-tailwindcss/weapp-tailwindcss
Assists in writing high-quality content by conducting research, adding citations, improving hooks, iterating on outlines, and providing real-time feedback on each section.
mvanhorn/last30days-skill
Research what people actually say about any topic in the last 30 days.
spacering-net/codeg
Structured manuscript/grant review with checklist-based evaluation.
aipoch/medical-research-skills
Complete workflow for generating academic research posters from PDF literature; use when you need to extract paper content from PDFs and produce a LaTeX-based poster…
aipoch/medical-research-skills
Analyzes clinical diagnostic accuracy studies for bias using the QUADAS-2 tool.
aipoch/medical-research-skills
Perform comprehensive exploratory data analysis on scientific data files across 200+ file formats.
aipoch/medical-research-skills
A toolkit for preparing ISO 13485:2016 certification documentation for medical device QMS.
aipoch/medical-research-skills
Recommends target journals for manuscript submission by analyzing the paper topic/abstract and the journal distribution of similar PubMed literature; use when users ask for journal…
aipoch/medical-research-skills
Creates academic-poster writing packages for LaTeX using beamerposter, tikzposter, or baposter.
Categories
Extracts concrete unmet clinical needs from guidelines, reviews, real-world studies, and clinical-practice evidence. Unmet Clinical Need Extractor is an agent skill from aipoch/medical-research-skills. Extracts concrete unmet clinical needs from guidelines, reviews, real-world studies, and clinical-practice evidence.
Unmet Clinical Need Extractor fits situations like: A user wants to turn broad medical research value into specific clinical pain points such as weak early detection; poor risk stratification; treatment-response heterogeneity; monitoring gaps.
Run `npx skills add aipoch/medical-research-skills --skill unmet-clinical-need-extractor -a claude-code`. Or copy the skill folder (awesome-med-research-skills/Evidence Insight/unmet-clinical-need-extractor in aipoch/medical-research-skills) into .claude/skills/unmet-clinical-need-extractor in your project. Claude Code loads it when a task matches its description.
Run `npx skills add aipoch/medical-research-skills --skill unmet-clinical-need-extractor -a codex`. Or copy the skill folder (awesome-med-research-skills/Evidence Insight/unmet-clinical-need-extractor in aipoch/medical-research-skills) into .agents/skills/unmet-clinical-need-extractor in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add aipoch/medical-research-skills --skill unmet-clinical-need-extractor -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/unmet-clinical-need-extractor, .gemini/skills/unmet-clinical-need-extractor, .github/skills/unmet-clinical-need-extractor and .opencode/skills/unmet-clinical-need-extractor in your project.
SKILL.md names no scripts, command-line tools or credentials: Unmet Clinical Need Extractor is instructions for the agent only.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
Unmet Clinical Need Extractor is published under the MIT licence (declared in SKILL.md). It allows redistribution, so the full SKILL.md is shown on this page.
About 3.9k tokens (SKILL.md is roughly 16k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full. Its references folder adds about 2.3k tokens, read only when the agent opens those files.
Skills that share tags, products or a category with Unmet Clinical Need Extractor: Hypothesis Generation (spacering-net/codeg, 3.9k stars), GitHub Deep Research (bytedance/deer-flow, 84k stars), Nature Paper Card (Yuan1z0825/nature-skills, 47k stars) and Content Research Writer (weapp-tailwindcss/weapp-tailwindcss, 1.9k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
aipoch (a GitHub organization) maintains it in aipoch/medical-research-skills, which has 1,937 GitHub stars. The repository holds 578 skills in this directory. The repository was last updated on September 17, 2026.
Source: aipoch/medical-research-skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.