Agent skill

Mindmap

by aipoch in aipoch/medical-research-skills

Generate mindmaps locally/offline with native HTML/CSS/JS (no external libraries); use when you need to parse Plain Text node structures or map LLM outputs into an on-device visualization.

MITAuto-check passed

Install Mindmap

skills CLI
$ npx skills add aipoch/medical-research-skills --skill mindmap -a claude-code

Project install by default; add -g for ~/.claude/skills/.

GitHub CLI
$ gh skill install aipoch/medical-research-skills mindmap --agent claude-code

Project scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).

Manual copy
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/scientific-skills/Other/mindmap .claude/skills/mindmap && rm -rf skills-src

Use ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.

Claude Code skills documentation · loads skills from .claude/skills/

Facts

Skill name
mindmap
GitHub stars
2k
Token cost
~1.7k tokens
SKILL.md length
813 words
Files
3 (incl. references)
Skills in repo
567
Repo updated
First seen
Licence
MIT

At a glance

Generate mindmaps locally/offline with native HTML/CSS/JS (no external libraries); use when you need to parse Plain Text node structures or map LLM outputs into an on-device visualization.

  • Works in 2 steps: Create a Plain Text mindmap file… → Open the renderer template
  • You need to parse Plain Text node structures
  • SKILL.md covers When to Use, Key Features, Dependencies and Example Usage, plus 11 more sections
  • Calls python

What it does

Mindmap is an agent skill from aipoch/medical-research-skills. Generate mindmaps locally/offline with native HTML/CSS/JS (no external libraries); use when you need to parse Plain Text node structures or map LLM outputs into an on-device visualization.

Its SKILL.md is about 1.7k tokens, which your agent loads only when the skill is triggered. The skill folder holds 3 other files, including reference files (for example `mindmap_audit_result_v2.json` and `references/streaming-implementation.md`).

It works with Python. The repository describes itself as: Hundreds of agent skills for medical research, including protocol design, data analysis, evidence insights, and academic writing. The licence is MIT.

When your agent uses it

  • You need to parse Plain Text node structures
  • Map LLM outputs into an on-device visualization

Example prompts

  • “/mindmap”

Requirements

  • Python 3

Workflow steps

2 steps, taken from the first numbered list in SKILL.md.

  1. Create a Plain Text mindmap file (example: mindmap.txt)
  2. Open the renderer template

What it can do on your machine

Read from SKILL.md and the folder at commit 686e09d. It shows what the files ask for, not the result of running them.

  • Tool permissions

    Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.

    From allowed-tools in the SKILL.md frontmatter.

  • Runs code

    Shell commands in SKILL.md call:

    • python

    From the folder's file list and the shell code blocks in SKILL.md.

  • Network

    No URLs in SKILL.md.

    From URLs in SKILL.md, links to its own repository left out.

  • Credentials

    Names no API keys, tokens, secrets or passwords.

    From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.

Context cost

Mindmap loads about 1.7k tokens when it runs, and up to ~2.1k if it reads all its reference files. Until then it costs about 49 tokens; SKILL.md has 813 words of instructions outside code blocks.

Always · name and description, kept in context so the agent knows when to use it
~49
When it runs · the whole SKILL.md, loaded when a task matches
~1.7k
With references · SKILL.md plus every file in references/, read only if the agent opens them
~2.1k

Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.

Safety

Auto-check passed

The automated check found no risky patterns in SKILL.md.

Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.

SKILL.md

The full file from aipoch/medical-research-skills at commit 686e09d, republished under its MIT licence (© aipoch). 813 words, ~1,736 tokens.

Download SKILL.mdSave it as .claude/skills/mindmap/SKILL.md (or your agent's skills folder). This skill also uses 2 other files; get the full folder from GitHub.
name
mindmap
description
Generate mindmaps locally/offline with native HTML/CSS/JS (no external libraries); use when you need to parse Plain Text node structures or map LLM outputs into an on-device visualization.
license
MIT
author
AIPOCH

Source: https://github.com/aipoch/medical-research-skills

When to Use

  • You need to render mindmaps in offline, air-gapped, or internal-network environments where CDN access is unavailable.
  • You want a zero-dependency renderer using only native HTML/CSS/JS (no third-party visualization libraries).
  • You need to parse a Plain Text mindmap format into a node tree and render it locally.
  • You want to stream or incrementally update mindmap content (e.g., from LLM output) and visualize it in a browser.
  • You need a single-file HTML template that can be reused across projects with minimal integration overhead.

Key Features

  • Local mindmap rendering using a single HTML file: assets/local-mindmap/index.html.
  • Plain Text → node structure parsing (format and rules defined in the reference document).
  • Customizable parsing rules and layout parameters while keeping no external library dependencies.
  • Designed for streaming-friendly workflows (generate/parse/update content progressively).

Dependencies

  • Python: None (no required packages at present).
  • Runtime: Any modern web browser capable of running standard HTML/CSS/JS.
  • External JS/CSS libraries: None (by design).

Example Usage

The following example is a complete, runnable workflow that renders a mindmap locally using the provided single-file template.

  1. Create a Plain Text mindmap file (example: mindmap.txt)
txt
Mindmap Demo
  Goals
    Offline rendering
    Zero dependencies
  Inputs
    Plain Text nodes
    LLM streaming output
  Output
    Local HTML visualization
  1. Open the renderer template
  • Open assets/local-mindmap/index.html in your browser.
  1. Load/insert the Plain Text content
  • Follow the Plain Text format and loading instructions described in:
    • references/streaming-implementation.md

Note: If you add any Python scripts under scripts/ (e.g., to transform LLM output into the Plain Text format), invoke them consistently as:

bash
python scripts/<task_name>.py

Implementation Details

  • Rendering template: The renderer is implemented as a reusable single-file HTML template:
    • assets/local-mindmap/index.html
  • Data format: The mindmap structure is represented in a Plain Text specification:
    • See references/streaming-implementation.md for the exact format, examples, and constraints.
  • Parsing rules: The parser converts Plain Text into a hierarchical node tree. You may adjust:
    • indentation/marker rules (to match your input style),
    • node labeling rules (to sanitize or normalize text),
    • streaming/incremental update behavior (if applicable), while preserving the no external dependency requirement.
  • Layout parameters: Layout and styling are controlled within the HTML/CSS/JS template. Tune spacing, alignment, and node styling as needed, referencing:
    • references/streaming-implementation.md
  • Script/config conventions (if you extend with scripts):
    • Put configuration constants at the top of each script (avoid excessive CLI flags).
    • Keep invocation consistent: python scripts/<task_name>.py.
    • If any Python packages are introduced, list them (with versions) in the Dependencies section above.

When Not to Use

  • Do not use this skill when the required source data, identifiers, files, or credentials are missing.
  • Do not use this skill when the user asks for fabricated results, unsupported claims, or out-of-scope conclusions.
  • Do not use this skill when a simpler direct answer is more appropriate than the documented workflow.

Required Inputs

  • A clearly specified task goal aligned with the documented scope.
  • All required files, identifiers, parameters, or environment variables before execution.
  • Any domain constraints, formatting requirements, and expected output destination if applicable.
Show full SKILL.md (352 more words)Show less
  1. Validate the request against the skill boundary and confirm all required inputs are present.
  2. Select the documented execution path and prefer the simplest supported command or procedure.
  3. Produce the expected output using the documented file format, schema, or narrative structure.
  4. Run a final validation pass for completeness, consistency, and safety before returning the result.

Deterministic Output Rules

  • Use the same section order for every supported request of this skill.
  • Keep output field names stable and do not rename documented keys across examples.
  • If a value is unavailable, emit an explicit placeholder instead of omitting the field.

Output Contract

  • Return a structured deliverable that is directly usable without reformatting.
  • If a file is produced, prefer a deterministic output name such as mindmap_result.md unless the skill documentation defines a better convention.
  • Include a short validation summary describing what was checked, what assumptions were made, and any remaining limitations.

Validation and Safety Rules

  • Validate required inputs before execution and stop early when mandatory fields or files are missing.
  • Do not fabricate measurements, references, findings, or conclusions that are not supported by the provided source material.
  • Emit a clear warning when credentials, privacy constraints, safety boundaries, or unsupported requests affect the result.
  • Keep the output safe, reproducible, and within the documented scope at all times.

Failure Handling

  • If validation fails, explain the exact missing field, file, or parameter and show the minimum fix required.
  • If an external dependency or script fails, surface the command path, likely cause, and the next recovery step.
  • If partial output is returned, label it clearly and identify which checks could not be completed.

Completion Checklist

  • Confirm all required inputs were present and valid.
  • Confirm the supported execution path completed without unresolved errors.
  • Confirm the final deliverable matches the documented format exactly.
  • Confirm assumptions, limitations, and warnings are surfaced explicitly.

Quick Validation

Run this minimal verification path before full execution when possible:

text
No local script validation step is required for this skill.

Expected output format:

text
Result file: mindmap_result.md
Validation summary: PASS/FAIL with brief notes
Assumptions: explicit list if any

Scope Reminder

  • Core purpose: Generate mindmaps locally/offline with native HTML/CSS/JS (no external libraries); use when you need to parse Plain Text node structures or map LLM outputs into an on-device visualization.

© aipoch, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file

Files

SKILL.md and 2 other files (references) in scientific-skills/Other/mindmap of aipoch/medical-research-skills.

  • SKILL.md
  • mindmap_audit_result_v2.json
  • references/streaming-implementation.md

Open the folder on GitHubat commit 686e09d

Compare with similar skills

Mindmap next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.

Mindmap compared with similar skills
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Mindmap this skillaipoch/medical-research-skills2k—~1.7kAutomated safety check: PassMIT
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PDF Processinganthropics/skills180k48 repos~2kAutomated safety check: PassProprietary
NotebookLM Research AssistantPleasePrompto/notebooklm-skill7.8k14 repos~2.4kAutomated safety check: NotesMIT
Manim Video Productionbrowser-use/video-use28k6 repos~3kAutomated safety check: PassMIT
Code Review ChecklistshareAI-lab/learn-claude-code78k5 repos~1.1kAutomated safety check: PassMIT

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Works with

Questions about Mindmap

What does Mindmap do?

Generate mindmaps locally/offline with native HTML/CSS/JS (no external libraries); use when you need to parse Plain Text node structures or map LLM outputs into an on-device visualization. Mindmap is an agent skill from aipoch/medical-research-skills. Generate mindmaps locally/offline with native HTML/CSS/JS (no external libraries); use when you need to parse Plain Text node structures or map LLM outputs into an on-device visualization.

When should I use Mindmap?

Mindmap fits situations like: you need to parse Plain Text node structures; map LLM outputs into an on-device visualization.

How do I install Mindmap in Claude Code?

Run `npx skills add aipoch/medical-research-skills --skill mindmap -a claude-code`. Or copy the skill folder (scientific-skills/Other/mindmap in aipoch/medical-research-skills) into .claude/skills/mindmap in your project. Claude Code loads it when a task matches its description.

How do I install Mindmap in Codex?

Run `npx skills add aipoch/medical-research-skills --skill mindmap -a codex`. Or copy the skill folder (scientific-skills/Other/mindmap in aipoch/medical-research-skills) into .agents/skills/mindmap in your project. Codex loads it when a task matches its description.

Can I use Mindmap in Cursor, Gemini CLI or GitHub Copilot?

Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add aipoch/medical-research-skills --skill mindmap -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/mindmap, .gemini/skills/mindmap, .github/skills/mindmap and .opencode/skills/mindmap in your project.

What does Mindmap need to run?

Going by SKILL.md and its folder, Mindmap needs the command-line tools its instructions call (python). Our summary lists: Python 3.

Does Mindmap access the network?

SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.

Is Mindmap safe to install?

Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.

What licence does Mindmap use?

Mindmap is published under the MIT licence (declared in SKILL.md). It allows redistribution, so the full SKILL.md is shown on this page.

How many tokens does Mindmap use?

About 1.7k tokens (SKILL.md is roughly 6.9k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full. Its references folder adds about 316 tokens, read only when the agent opens those files.

What are the alternatives to Mindmap?

Skills that share tags, products or a category with Mindmap: MCP Server Builder (anthropics/skills, 180k stars), PDF Processing (anthropics/skills, 180k stars), NotebookLM Research Assistant (PleasePrompto/notebooklm-skill, 7.8k stars) and Manim Video Production (browser-use/video-use, 28k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.

Who maintains Mindmap?

aipoch (a GitHub organization) maintains it in aipoch/medical-research-skills, which has 1,974 GitHub stars. The repository holds 567 skills in this directory. The repository was last updated on September 17, 2026.

Source: aipoch/medical-research-skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.