Hypothesis Generation
spacering-net/codeg
Structured hypothesis formulation from observations. An agent skill from spacering-net/codeg.
Writes Specific Aims pages for grant applications. An agent skill from aipoch/medical-research-skills.
$ npx skills add aipoch/medical-research-skills --skill grant-specific-aims-writer -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install aipoch/medical-research-skills grant-specific-aims-writer --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/'awesome-med-research-skills/Academic Writing/grant-specific-aims-writer' .claude/skills/grant-specific-aims-writer && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "grant-specific-aims-writer" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/awesome-med-research-skills/Academic%20Writing/grant-specific-aims-writer into .claude/skills/grant-specific-aims-writer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "grant-specific-aims-writer", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/aipoch/medical-research-skills/tree/main/awesome-med-research-skills/Academic%20Writing/grant-specific-aims-writerType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add aipoch/medical-research-skills --skill grant-specific-aims-writer -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install aipoch/medical-research-skills grant-specific-aims-writer --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .agents/skills && cp -r skills-src/'awesome-med-research-skills/Academic Writing/grant-specific-aims-writer' .agents/skills/grant-specific-aims-writer && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "grant-specific-aims-writer" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/awesome-med-research-skills/Academic%20Writing/grant-specific-aims-writer into .agents/skills/grant-specific-aims-writer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "grant-specific-aims-writer", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add aipoch/medical-research-skills --skill grant-specific-aims-writer -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install aipoch/medical-research-skills grant-specific-aims-writer --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/'awesome-med-research-skills/Academic Writing/grant-specific-aims-writer' .cursor/skills/grant-specific-aims-writer && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "grant-specific-aims-writer" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/awesome-med-research-skills/Academic%20Writing/grant-specific-aims-writer into .cursor/skills/grant-specific-aims-writer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "grant-specific-aims-writer", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/aipoch/medical-research-skills.git --path 'awesome-med-research-skills/Academic Writing/grant-specific-aims-writer'--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add aipoch/medical-research-skills --skill grant-specific-aims-writer -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install aipoch/medical-research-skills grant-specific-aims-writer --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/'awesome-med-research-skills/Academic Writing/grant-specific-aims-writer' .gemini/skills/grant-specific-aims-writer && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "grant-specific-aims-writer" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/awesome-med-research-skills/Academic%20Writing/grant-specific-aims-writer into .gemini/skills/grant-specific-aims-writer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "grant-specific-aims-writer", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install aipoch/medical-research-skills grant-specific-aims-writerInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add aipoch/medical-research-skills --skill grant-specific-aims-writer -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .github/skills && cp -r skills-src/'awesome-med-research-skills/Academic Writing/grant-specific-aims-writer' .github/skills/grant-specific-aims-writer && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "grant-specific-aims-writer" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/awesome-med-research-skills/Academic%20Writing/grant-specific-aims-writer into .github/skills/grant-specific-aims-writer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "grant-specific-aims-writer", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add aipoch/medical-research-skills --skill grant-specific-aims-writer -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install aipoch/medical-research-skills grant-specific-aims-writer --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/aipoch/medical-research-skills.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/'awesome-med-research-skills/Academic Writing/grant-specific-aims-writer' .opencode/skills/grant-specific-aims-writer && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "grant-specific-aims-writer" agent skill from https://github.com/aipoch/medical-research-skills/tree/main/awesome-med-research-skills/Academic%20Writing/grant-specific-aims-writer into .opencode/skills/grant-specific-aims-writer/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "grant-specific-aims-writer", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
grant-specific-aims-writerWrites Specific Aims pages for grant applications. An agent skill from aipoch/medical-research-skills.
Grant Specific Aims Writer is an agent skill from aipoch/medical-research-skills. Writes Specific Aims pages for grant applications. Use when drafting or revising the Specific Aims page (NIH R01/R21/R03), NSF Project Summary, or equivalent for any major funding agency. Also triggers on "write my specific aims", "help me draft specific aims for NIH", "what should a specific aims page include", "NSF project summary", "write my grant aims", or "how do I structure an R01".
Its SKILL.md is about 1.8k tokens, which your agent loads only when the skill is triggered. The skill folder holds 9 other files, including scripts and reference files (for example `eval_report_grant-specific-aims-writer_result.json`, `references/NIH_R01_template.md` and `references/NSF_template.md`).
It sits in Research & Science. The repository describes itself as: Hundreds of agent skills for medical research, including protocol design, data analysis, evidence insights, and academic writing. The licence is MIT.
5 steps, taken from the step headings in SKILL.md.
Read from SKILL.md and the folder at commit 686e09d. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Ships 1 file in scripts/ (Python), which the agent can run.
From the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Grant Specific Aims Writer loads about 1.8k tokens when it runs, and up to ~8.9k if it reads all its reference files. Until then it costs about 105 tokens; SKILL.md has 712 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); the scripts in this folder are not scanned.
The full file from aipoch/medical-research-skills at commit 686e09d, republished under its MIT licence (© aipoch). 712 words, ~1,770 tokens.
.claude/skills/grant-specific-aims-writer/SKILL.md (or your agent's skills folder). This skill also uses 7 other files; get the full folder from GitHub.You are a grant writing specialist. Your primary focus is the Specific Aims page — the most critical single page of an NIH application — and equivalent opening sections for other funding agencies.
This skill accepts:
Out-of-scope:
"Grant Proposal Assistant focuses on the Specific Aims page and opening frames for grant applications. For full Research Strategy sections, use this skill iteratively with each section."
This is the most important page in an NIH application. Every element must earn its space.
OPENING PARAGRAPH (3–4 sentences)
├── Hook: the clinical/scientific problem and its significance
├── Gap: what is unknown or insufficient
└── Opportunity: why now, why you, why this approach
OVERALL OBJECTIVE (1 sentence)
"The overall objective of this [mechanism] is to [what you will do] in order to [what you will establish]."
CENTRAL HYPOTHESIS (1 sentence)
"Our central hypothesis is that [specific, testable statement], based on [brief evidence foundation]."
RATIONALE / PRELIMINARY DATA (2–3 sentences)
"This hypothesis is supported by [key preliminary data or prior findings]."
AIM 1 — [Title] (2–3 sentences)
"We will [what you will do]. [Working hypothesis.] [Expected outcome and how it addresses the gap.]"
AIM 2 — [Title] (2–3 sentences)
[Same structure as Aim 1]
AIM 3 — [Title, if applicable] (2–3 sentences)
[Same structure; optional for R01; typically 2–3 aims total]
EXPECTED OUTCOMES AND INNOVATION (2–3 sentences)
"Completion of these aims will [what you will establish]. This research is innovative because [what makes the approach novel]."
POSITIVE IMPACT (2–3 sentences)
"These findings are expected to [clinical, scientific, or public health impact]."Before drafting, identify:
If the aims are too broad or the hypothesis is unstated, help the user narrow before drafting. A testable, specific hypothesis is essential.
Hypothesis-driven structure: Each aim should test a component of the central hypothesis. Avoid aims that are purely descriptive ("we will characterize X") — they should test a prediction.
Aim independence: Aims should not be fully sequential (if Aim 1 fails completely, Aims 2 and 3 should still be executable). Flag if the user's proposed aims are entirely dependent.
Scope discipline: Each aim should be completable in the proposed project period with the proposed team. Flag if an aim seems to require resources or time not feasible for the mechanism.
Avoid:
Write in the NIH structure above. Aim for:
NSF Project Summary = 1 page with three required components:
Overview (one paragraph): What will be done?
Intellectual Merit (one paragraph): How does it advance knowledge in the field? What is the scientific innovation?
Broader Impacts (one paragraph): What are the societal benefits? Training, education, diversity, technology transfer, public engagement?
Key difference from NIH: NSF reviewers weight Broader Impacts equally with Intellectual Merit. This section must be substantive, not an afterthought.
Before delivering:
→ NIH R01 full template: references/NIH_R01_template.md → NSF template: references/NSF_template.md → Specific Aims examples: references/specific_aims_examples.md → Review checklist: references/review_checklist.md
© aipoch, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
SKILL.md and 7 other files (scripts, references) in awesome-med-research-skills/Academic Writing/grant-specific-aims-writer of aipoch/medical-research-skills.
Open the folder on GitHubat commit 686e09d
Grant Specific Aims Writer next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Grant Specific Aims Writer this skillaipoch/medical-research-skills | 1.9k | — | ~1.8k | Automated safety check: Pass | MIT | |
| Hypothesis Generationspacering-net/codeg | 3.9k | 14 repos | ~3.6k | Automated safety check: Notes | MIT | |
| GitHub Deep Researchbytedance/deer-flow | 84k | 4 repos | ~1.3k | Automated safety check: Pass | MIT | |
| Nature Paper CardYuan1z0825/nature-skills | 47k | 2 repos | ~2.1k | Automated safety check: Pass | Apache-2.0 | |
| Content Research Writerweapp-tailwindcss/weapp-tailwindcss | 1.9k | 25 repos | ~3.5k | Automated safety check: Pass | MIT | |
| Last30daysmvanhorn/last30days-skill | 64k | — | ~7.9k | Automated safety check: Notes | MIT |
spacering-net/codeg
Structured hypothesis formulation from observations. An agent skill from spacering-net/codeg.
bytedance/deer-flow
Researches a GitHub repository over four rounds using the GitHub API and web search, then writes a structured markdown report with timeline, metrics and Mermaid diagrams.
Yuan1z0825/nature-skills
Builds a structured deep-reading card for one scientific paper, covering methods, how experiments support claims, limitations and research ideas, with a script to prepare the source.
weapp-tailwindcss/weapp-tailwindcss
Assists in writing high-quality content by conducting research, adding citations, improving hooks, iterating on outlines, and providing real-time feedback on each section.
mvanhorn/last30days-skill
Research what people actually say about any topic in the last 30 days.
spacering-net/codeg
Structured manuscript/grant review with checklist-based evaluation.
aipoch/medical-research-skills
Complete workflow for generating academic research posters from PDF literature; use when you need to extract paper content from PDFs and produce a LaTeX-based poster…
aipoch/medical-research-skills
Analyzes clinical diagnostic accuracy studies for bias using the QUADAS-2 tool.
aipoch/medical-research-skills
Perform comprehensive exploratory data analysis on scientific data files across 200+ file formats.
aipoch/medical-research-skills
A toolkit for preparing ISO 13485:2016 certification documentation for medical device QMS.
aipoch/medical-research-skills
Recommends target journals for manuscript submission by analyzing the paper topic/abstract and the journal distribution of similar PubMed literature; use when users ask for journal…
aipoch/medical-research-skills
Creates academic-poster writing packages for LaTeX using beamerposter, tikzposter, or baposter.
Categories
Writes Specific Aims pages for grant applications. An agent skill from aipoch/medical-research-skills. Grant Specific Aims Writer is an agent skill from aipoch/medical-research-skills. Writes Specific Aims pages for grant applications.
Grant Specific Aims Writer fits situations like: revising the Specific Aims page (NIH R01/R21/R03); NSF Project Summary; equivalent for any major funding agency; write my specific aims.
Run `npx skills add aipoch/medical-research-skills --skill grant-specific-aims-writer -a claude-code`. Or copy the skill folder (awesome-med-research-skills/Academic Writing/grant-specific-aims-writer in aipoch/medical-research-skills) into .claude/skills/grant-specific-aims-writer in your project. Claude Code loads it when a task matches its description.
Run `npx skills add aipoch/medical-research-skills --skill grant-specific-aims-writer -a codex`. Or copy the skill folder (awesome-med-research-skills/Academic Writing/grant-specific-aims-writer in aipoch/medical-research-skills) into .agents/skills/grant-specific-aims-writer in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add aipoch/medical-research-skills --skill grant-specific-aims-writer -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/grant-specific-aims-writer, .gemini/skills/grant-specific-aims-writer, .github/skills/grant-specific-aims-writer and .opencode/skills/grant-specific-aims-writer in your project.
Going by SKILL.md and its folder, Grant Specific Aims Writer needs Python for the scripts in its folder. Our summary lists: Python 3.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. The check reads SKILL.md only: the scripts in the folder are not scanned, so read them before running anything.
Grant Specific Aims Writer is published under the MIT licence (declared in SKILL.md). It allows redistribution, so the full SKILL.md is shown on this page.
About 1.8k tokens (SKILL.md is roughly 7.1k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full. Its references folder adds about 7.1k tokens, read only when the agent opens those files.
Skills that share tags, products or a category with Grant Specific Aims Writer: Hypothesis Generation (spacering-net/codeg, 3.9k stars), GitHub Deep Research (bytedance/deer-flow, 84k stars), Nature Paper Card (Yuan1z0825/nature-skills, 47k stars) and Content Research Writer (weapp-tailwindcss/weapp-tailwindcss, 1.9k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
aipoch (a GitHub organization) maintains it in aipoch/medical-research-skills, which has 1,937 GitHub stars. The repository holds 578 skills in this directory. The repository was last updated on September 17, 2026.
Source: aipoch/medical-research-skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.