Matplotlib · Bioinformatics

Visualize copy number profiles, segments, allele-specific tracks, and cohort patterns from CNVkit, GATK, ASCAT, FACETS, Sequenza, and other callers.

GPTomics/bioSkills

Build Manhattan, Miami, QQ, and locuszoom-style regional plots from GWAS, TWAS, PWAS, and QTL summary statistics with correct genomic-inflation diagnostics, multi-trait overlays, lead-SNP labeling…

GPTomics/bioSkills

Load when summarising STAR / HISAT2 / Salmon alignment-rate logs in bulk RNA-seq.

TianGzlab/OmicsClaw

Visualize Hi-C contact matrices, TADs, loops, and genomic features using matplotlib, cooltools, and HiCExplorer.

FreedomIntelligence/OpenClaw-Medical-Skills

Visualize metagenomic profiles using R (phyloseq, microbiome) and Python (matplotlib, seaborn).

FreedomIntelligence/OpenClaw-Medical-Skills

Build volcano and MA plots from differential-expression / association results with LFC shrinkage, FDR-adjusted thresholds, sensible label placement, and axis-truncation conventions.

GPTomics/bioSkills

Draw and export phylogenetic trees with Bio.Phylo plus matplotlib, and route rich figures to ggtree, ETE4, or iTOL.

GPTomics/bioSkills

Exports publication-ready figures with the correct vector/raster split, embedded editable fonts, color-space-robust palettes, and journal-correct sizing and resolution in matplotlib and ggplot2.

GPTomics/bioSkills

Build restriction maps showing enzyme cut positions and inter-site distances along DNA using Biopython Bio.Restriction.

GPTomics/bioSkills

Use Bio.Phylo to read/write phylogenetic trees and perform visualization and statistics; use when tree parsing/conversion, pruning/rerooting, distance calculation, or plotting is required.

aipoch/medical-research-skills

Visualize copy number profiles, segments, and compare across samples.

FreedomIntelligence/OpenClaw-Medical-Skills