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Skills
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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | Predicts how small molecules bind to a protein with DiffDock, covering batch docking, pose ranking by confidence and checks on the results; not for binding affinity. | K-Dense-AI/ | 48k | 1 repo | ~3k | Automated safety check: Notes | MIT | 6 days ago |
| 2 | 2.Chai Structure prediction using Chai-1, a foundation model for molecular structure. | adaptyvbio/ | 164 | 3 repos | ~1.5k | Automated safety check: Pass | MIT | 4 mo ago |
| 3 | 3.Research A skill your agent uses for web searches and current information lookups, finding sources, fact-checking, researching questions, comparing sources, or summarising web pages. | zhongkaifu/ | 568 | — | ~2.3k | Automated safety check: Warn | BSD-3-Clause | today |
| 4 | Build, simulate, and analyze quantum circuits with MindQuantum. | mindspore-ai/ | 102 | — | ~2.3k | Automated safety check: Pass | Apache-2.0 | 20 days ago |
| 5 | Builds the code for a frozen research experiment test-first, with leakage controls, seed handling and saved evidence so results can be rerun and audited. | Light0305/ | 640 | — | ~2.3k | Automated safety check: Pass | MIT | 3 mo ago |
| 6 | Builds and troubleshoots TorchDrug 0.2.1 workflows for molecular graphs, property prediction, self-supervised pretraining, molecule generation, retrosynthesis, protein representation learning, and… | K-Dense-AI/ | 48k | 1 repo | ~3k | Automated safety check: Notes | Apache-2.0 | 6 days ago |
| 7 | Write code that calls the installed nvMolKit Python API for GPU-accelerated, batched RDKit-style operations - Morgan fingerprints, Tanimoto/cosine similarity, ETKDG conformer embedding, MMFF/UFF… | NVIDIA-BioNeMo/ | 479 | — | ~4.4k | Automated safety check: Pass | Apache-2.0 | 2 days ago |
| 8 | A skill your agent uses when creating, migrating, or debugging pixi environments, especially for scientific Python, bioinformatics, single-cell analysis, CUDA/PyTorch, Jupyter/VS Code kernels… | xuzhougeng/ | 1k | — | ~3.7k | Automated safety check: Pass | AGPL-3.0 | yesterday |
| 9 | A skill your agent uses when writing or debugging nvMolKit Python code for GPU-accelerated RDKit fingerprints, similarity, conformers, clustering, and molecular searches. | NVIDIA/ | 3.6k | 1 repo | ~4.8k | Automated safety check: Pass | Apache-2.0 | 2 days ago |
| 10 | Run predictions with a finetuned KERMT checkpoint on a SMILES-only CSV. | NVIDIA/ | 3.6k | 1 repo | ~1.5k | Automated safety check: Pass | Apache-2.0 | 2 days ago |
| 11 | A skill your agent uses when porting circuits from another framework (e.g. | NVIDIA/ | 3.6k | — | ~1.9k | Automated safety check: Pass | Apache-2.0 | 2 days ago |
| 12 | Build and run LAMMPS molecular dynamics with isolated MLIP-specific binaries (MACE, MatGL/CHGNet, FairChem) to avoid Python and Torch stack conflicts. | learningmatter-mit/ | 176 | — | ~1.2k | Automated safety check: Pass | MIT | 4 days ago |
| 13 | Generate novel crystal structures and molecules using ADiT (All-atom Diffusion Transformer), a unified latent diffusion model. | learningmatter-mit/ | 176 | — | ~1.4k | Automated safety check: Pass | MIT | 4 days ago |