Research & Science · By K-Dense-AI

Finds papers in OpenAlex, PubMed and Google Scholar, turns DOIs, PMIDs and arXiv IDs into clean BibTeX, and validates citations for a manuscript or thesis.

K-Dense-AI/claude-scientific-writer

Formulate evidence-bounded scientific questions, candidate hypotheses, rival explanations, causal or associational claims, discriminating predictions, measurements, and preregistration-ready…

K-Dense-AI/claude-scientific-writer

Prepare evidence-bounded, constructive peer-review drafts and structured manuscript assessments.

K-Dense-AI/claude-scientific-writer

Estimates reaction fluxes inside cells from steady-state carbon-13 labeling data with a bundled mfapy-based solver, and reports which fluxes the data pin down.

K-Dense-AI/scientific-agent-skills

Provide qualitative-first, evidence-traceable developmental review of scholarly works and audit low-stakes research-assessment rubrics with optional local quality controls.

K-Dense-AI/claude-scientific-writer

Plans, runs, and documents analytical method validation, verification, or transfer studies under ICH Q2(R2)/Q14, USP, ICH M10, CLSI EP, or ISO/IEC 17025.

K-Dense-AI/scientific-agent-skills

Draft, revise, and audit scientific manuscripts or reports with explicit evidence provenance, reporting-guideline coverage, authorship accountability, confidentiality controls, and local consistency…

K-Dense-AI/claude-scientific-writer

Runs Cantera constant-volume or constant-pressure ignition simulations and reports temperature-based ignition delay with mechanism provenance and checks.

K-Dense-AI/scientific-agent-skills

Prepare journal manuscripts, conference papers, research posters, and grant documents using venue-specific formatting guidance and bundled LaTeX scaffolds.

K-Dense-AI/claude-scientific-writer

Predicts how small molecules bind to a protein with DiffDock, covering batch docking, pose ranking by confidence and checks on the results; not for binding affinity.

K-Dense-AI/scientific-agent-skills

Plans and audits runs of the HypoGeniC and HypoRefine packages, which propose hypotheses from labeled text datasets, with local checks before any model call.

K-Dense-AI/scientific-agent-skills

Builds conference-size scientific posters in LaTeX with beamerposter, tikzposter or baposter, including figure preparation, compilation and print preflight checks.

K-Dense-AI/claude-scientific-writer

Write competitive research proposals for NSF, NIH, DOE, DARPA, and Taiwan NSTC.

K-Dense-AI/claude-scientific-writer

A skill your agent uses when you have an approved research question and need a concrete analysis plan, before touching outcome data or fitting any model

K-Dense-AI/science-superpowers

Format and structurally validate local treatment-plan documentation after clinical decisions have already been supplied and verified by authorized licensed professionals.

K-Dense-AI/claude-scientific-writer

Runs systematic, scoping or narrative literature reviews across PubMed, arXiv, bioRxiv and Semantic Scholar, with citation checks and Markdown or PDF output.

K-Dense-AI/scientific-agent-skills

A skill your agent uses when your human partner has explicitly opted into exploratory or feasibility mode - a compute-heavy simulation, an unproven pipeline, an unbenchmarked solver, an untested…

K-Dense-AI/science-superpowers

Builds, reviews, migrates, and plans MATLAB or GNU Octave numerical workflows.

K-Dense-AI/scientific-agent-skills

You MUST use this before any data analysis or investigation - before exploring a dataset, loading or profiling data, running a model, computing a statistic, or testing an idea, and before any…

K-Dense-AI/science-superpowers

Applies the epidemiological reasoning and population-health frameworks of Albert Hofman (Harvard epidemiologist, Rotterdam Study).

K-Dense-AI/mimeographs

Analyzes Neuropixels extracellular recordings end-to-end with SpikeInterface.

K-Dense-AI/scientific-agent-skills

Prepare and validate research-only clinical decision-support evaluation, evidence-profile, cohort, survival, biomarker/model, privacy, and governance artifacts.

K-Dense-AI/claude-scientific-writer

Compile current scholarly evidence for a scientific manuscript or research brief.

K-Dense-AI/claude-scientific-writer

A skill your agent uses when a result is surprising, impossible, contradicts a sanity check, a pipeline fails, a model won't converge, or a replication fails - before adjusting anything

K-Dense-AI/science-superpowers

Processes calibrated one-dimensional complex NMR free-induction decays with nmrglue into phased spectra, peak candidates, and signed integration regions.

K-Dense-AI/scientific-agent-skills

Create safety-bounded draft structures and run local deterministic checks for clinical case, diagnostic, trial, safety, and aggregate research reports.

K-Dense-AI/claude-scientific-writer

Converts neuroscience acquisition data to Neurodata Without Borders files with NeuroConv and PyNWB, preserves metadata and timebases, checks evidence-based clock alignment, and produces schema…

K-Dense-AI/scientific-agent-skills

A skill your agent uses when an analysis is complete and verified, and you need to decide how to report it and archive the work for reproducibility

K-Dense-AI/science-superpowers

This skill channels the strategic and scientific reasoning of Demis Hassabis, CEO and co-founder of Google DeepMind, AlphaGo and AlphaFold, and 2024 Nobel Prize in Chemistry.

K-Dense-AI/mimeo

Pharmacokinetic and pharmacodynamic modelling and simulation - non-compartmental analysis, compartmental and population PK, PK/PD and exposure-response, TMDD, PBPK orientation, bioequivalence…

K-Dense-AI/scientific-agent-skills

Designs and audits PCR and RT-qPCR primers with Primer3, explicit thermodynamic conditions, reference-based off-target amplification searches, and traceable sequence coordinates.

K-Dense-AI/scientific-agent-skills

Simulates lithium-ion battery charge, discharge and rest experiments with PyBaMM, records parameter-set provenance, checks mesh and solver sensitivity, and compares predicted voltage curves with…

K-Dense-AI/scientific-agent-skills

Computes finite-temperature CALPHAD equilibria, phase fractions, and phase compositions from thermodynamic TDB databases using pycalphad.

K-Dense-AI/scientific-agent-skills

Builds and checks Bayesian models with PyMC, including hierarchical models, NUTS MCMC, variational inference, mutable-data predictions, posterior predictive checks, diagnostics, and PSIS-LOO model…

K-Dense-AI/scientific-agent-skills

Simulates biochemical kinetic models from SBML or Antimony with Tellurium and libRoadRunner, checks model units, compares deterministic parameter perturbations, and exports and replays SBML plus…

K-Dense-AI/scientific-agent-skills

Think and work like an expert Biomedical Imaging Scientist. An agent skill from K-Dense-AI/scientific-agents.

K-Dense-AI/scientific-agents

Rowan is a cloud-native molecular modeling and medicinal-chemistry workflow platform with a Python API.

K-Dense-AI/scientific-agent-skills

Looks up precomputed AlphaGenome Atlas effects for any GRCh38 single-nucleotide variant (AVI score with Phred and 18 SHAP feature attributions, plus raw and quantile scores for RNA-seq, DNase, ATAC…

K-Dense-AI/scientific-agent-skills

Infers candidate gene regulatory networks from bulk or single-cell expression data using AertsLab Arboreto GRNBoost2 and GENIE3.

K-Dense-AI/scientific-agent-skills

Prepares bulk RNA-seq FASTQ, Salmon, STAR or featureCounts output for gene-level differential expression.

K-Dense-AI/scientific-agent-skills

Operates Fictiv (app.fictiv.com), the on-demand manufacturing platform, end to end in the user's browser.

K-Dense-AI/scientific-agent-skills

Reads, inspects, and writes Flow Cytometry Standard (FCS) 2.0, 3.0, and 3.1 files with FlowIO.

K-Dense-AI/scientific-agent-skills

Analyzes flow cytometry data with FlowKit, including spillover compensation, logicle and biexponential transforms, hierarchical gating, GatingML strategies, and supported FlowJo 10 workspaces.

K-Dense-AI/scientific-agent-skills

Plans, configures, inspects, restarts, and analyzes bounded FluidSim computational-fluid-dynamics simulations with explicit numerical-validity and HPC safety checks.

K-Dense-AI/scientific-agent-skills

Converts genomic intervals between coordinate conventions, normalises and compares variant representations, and detects assembly or contig-naming mismatches before they corrupt an analysis.

K-Dense-AI/scientific-agent-skills

Analyzes and engineers protein glycosylation by scanning canonical N-glycosylation sequons, describing S/T-rich regions, checking curated glycan evidence, and preparing NetNGlyc, NetOGlyc and…

K-Dense-AI/scientific-agent-skills

Builds, registers, debugs, and operates bioinformatics workflows on Latch using the Python SDK, CLI, Latch Data and Registry, Nextflow, Snakemake, programmatic execution, and Latch MCP.

K-Dense-AI/scientific-agent-skills

Analyzes pooled CRISPR screen FASTQ reads and guide-count matrices with MAGeCK, validates guide libraries and contrasts, measures replicate and library QC, and produces gene hit rankings with effect…

K-Dense-AI/scientific-agent-skills