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Data & Analytics · Python · jaechang-hits/SciAgent-Skills
Skills
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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | 3Dmol.js WebGL molecular visualization emitted as self-contained HTML. | jaechang-hits/ | 374 | — | ~3.2k | Automated safety check: Pass | BSD-3-Clause | 12 days ago |
| 2 | Bulk RNA-seq DE with PyDESeq2: load counts, normalize, fit negative binomial models, Wald test (BH-FDR), LFC shrinkage, volcano/MA plots. | jaechang-hits/ | 374 | 1 repo | ~3.8k | Automated safety check: Pass | CC-BY-4.0 | 12 days ago |
| 3 | Python library for single-particle tracking (SPT) in video microscopy via the Crocker-Grier algorithm. | jaechang-hits/ | 374 | 1 repo | ~6.6k | Automated safety check: Pass | BSD-3-Clause | 12 days ago |
| 4 | Low-level Python plotting for scientific figures: publication-quality line, scatter, bar, heatmap, contour, 3D; multi-panel layouts; fine control of every element. | jaechang-hits/ | 374 | 1 repo | ~4k | Automated safety check: Pass | Unknown | 12 days ago |
| 5 | Python image processing for microscopy and bioimage analysis. | jaechang-hits/ | 374 | 1 repo | ~4.4k | Automated safety check: Pass | BSD-3-Clause | 12 days ago |
| 6 | Classical ML in Python: classification, regression, clustering, dim reduction, evaluation, tuning, preprocessing pipelines. | jaechang-hits/ | 374 | 1 repo | ~4k | Automated safety check: Pass | BSD-3-Clause | 12 days ago |
| 7 | Python statistical modeling: regression (OLS, WLS, GLM), discrete (Logit, Poisson, NegBin), time series (ARIMA, SARIMAX, VAR), with rigorous inference, diagnostics, and hypothesis tests. | jaechang-hits/ | 374 | 1 repo | ~4.2k | Automated safety check: Pass | BSD-3-Clause | 12 days ago |
| 8 | Python bridge to ImageJ2/Fiji for macros, plugins (Bio-Formats, TrackMate, Analyze Particles), NumPy↔ImagePlus/ImgLib2 exchange, and ImageJ Ops. | jaechang-hits/ | 374 | 1 repo | ~6.2k | Automated safety check: Pass | Apache-2.0 | 12 days ago |
| 9 | Annotate and filter VCF variants with SnpEff and SnpSift. An agent skill from jaechang-hits/SciAgent-Skills. | jaechang-hits/ | 374 | 1 repo | ~5.4k | Automated safety check: Pass | MIT | 12 days ago |
