Data & Analytics · For researchers

Queries the openFDA API from Python for drug, device, food and veterinary data: adverse events, recalls, labels, approvals, NDC and UNII lookups.

davila7/claude-code-templates

Works with genomic intervals using gtars, a Rust toolkit with Python bindings: overlap detection, coverage tracks, tokenization for ML models and reference sequences.

davila7/claude-code-templates

Processes digital pathology whole slide images with histolab: tissue detection, mask creation, tile extraction and dataset preparation for deep learning.

davila7/claude-code-templates

Processes physiological signals with NeuroKit2 in Python: ECG, PPG, EEG, EDA, respiration, EMG and EOG, including HRV, events and complexity measures.

davila7/claude-code-templates

Computational pathology toolkit for analyzing whole-slide images (WSI) and multiparametric imaging data.

davila7/claude-code-templates

Builds machine learning pipelines on clinical data with PyHealth: EHR datasets, prediction tasks, medical code mapping, healthcare models and evaluation.

davila7/claude-code-templates

Fits and evaluates survival models with scikit-survival: Cox models, Random Survival Forests, boosting, survival SVMs, concordance index, Brier score and competing risks.

davila7/claude-code-templates

Pipeline stage that turns a mathematical modeling report into runnable programs per sub-question, frozen numerical results and reviewable evidence files.

WuXinbo-bo/Math-model-skills

Runs a seven-step quality-control and exploration pipeline on scRNA-seq, CyTOF or flow cytometry data and writes a plain-language report of what it found.

LigphiDonk/Oh-my--paper

Consolidates BERTopic, LDA or NMF topic output into a theory-driven classification framework and writes the final labels back to an Excel file.

TyrealQ/q-skills

Molecular machine learning toolkit. An agent skill from davila7/claude-code-templates.

davila7/claude-code-templates

Turns raw flux balance analysis output and a COBRApy model into gene essentiality maps, phenotypic phase planes, flux sampling results, pathway summaries and secretion predictions.

aiming-lab/AutoResearchClaw

Polish, restructure, or translate academic prose into Nature-leaning English using writing-strategy principles, curated Nature/Nature Communications article patterns, and phrase-level support from…

Galaxy-Dawn/claude-scholar

Score a claim against the evidence behind it. An agent skill from OpenMinis/MinisSkills.

OpenMinis/MinisSkills

盒子原创行业研究 Skill 组合中的趋势分析专项。判断行业、技术、需求或商业化变化所处阶段、驱动机制、核心变量、时间关系、经营后果与证伪条件。用于“分析行业趋势或未来走向”“判断技术扩散阶段”“研究供需、需求演变或景气变化”等问题。

hexiaofeier/hehe-industry-research-skill-pack

Plugin shim for the mathmodel-skill competition workflow. An agent skill from handsomeZR-netizen/mathmodel-skill.

handsomeZR-netizen/mathmodel-skill

Implement a research paper as an interactive marimo notebook together with the user.

marimo-team/skills

Add new survey question codes (e.g. An agent skill from owid/etl.

owid/etl

Load when correcting batch effects in bulk expression using R sva ComBat or the legacy Python parametric approximation.

TianGzlab/OmicsClaw

Decision layer for researching social posts and trends that ranks discovery results and enforces a privacy screen before any identifying data leaves the local session.

kerpopule/hermes-jev-skills

Mine and synthesize real top-journal scenario/vignette experiment patterns for behavioral research.

Drchronx/ai-agent-research-starter-kit

This skill should be used when the user asks to "analyze trends in a research area", "what is trending in X", "research landscape for topic Y", "topic trend analysis", "emerging themes in machine…

jerry609/PaperBot

Load when discovering bulk gene co-expression modules and hub genes with R WGCNA.

TianGzlab/OmicsClaw

Fetch a regional slice of plasma pQTL summary statistics from the UK Biobank Pharma Proteomics Project (UKB-PPP; Sun 2023 Nature) for a specific (protein, ancestry) measurement.

ClawBio/ClawBio

Systematic experimental results analysis workflow for ML/AI research papers.

catlog22/maestro-flow

Route HugeGraph MCP regression testing tasks to the current public tool surface, including inspection, read-only queries, Gremlin generation, extraction, controlled import, schema validate/dry-run…

apache/hugegraph-ai

Comprehensive open data directory (100+ datasets across 14 categories) with auto-fetch capability, plus data collection instrument design, variable dictionaries, data management, IRB materials, and…

joshzyj/open-scholar-skill

A skill your agent uses for PhD-level expertise in data science, statistics, and machine learning: rigorous statistical analysis, experimental design, causal inference, advanced modeling, research…

magnus919/agent-skills

Finds usable public datasets, judges whether the data can support a research idea, and checks train and test splits for leakage before results are trusted.

Light0305/Light-skills

Follow the bundled ecology hypervolume workflow. Use this skill only when the user explicitly invokes `$hypervolume-workflow`. Do not auto-select…

Jinze-Lee/codex-skills-workbench

Build and train variational quantum algorithms (VQE, QAOA, QML, QNN) with MindQuantum.

mindspore-ai/mindquantum

Builds and checks Bayesian models with PyMC, including hierarchical models, NUTS MCMC, variational inference, mutable-data predictions, posterior predictive checks, diagnostics, and PSIS-LOO model…

K-Dense-AI/scientific-agent-skills

Computes RDKit physicochemical descriptors and molecular fingerprints from SMILES through a uv-run CLI script that skips and logs invalid molecules.

jinzhezenggroup/computational-chemistry-agent-skills

Infers candidate gene regulatory networks from bulk or single-cell expression data using AertsLab Arboreto GRNBoost2 and GENIE3.

K-Dense-AI/scientific-agent-skills

Performs Particle Image Velocimetry (PIV) analysis with OpenPIV.

K-Dense-AI/scientific-agent-skills

Conduct exploratory data analysis (EDA) before hypothesis testing.

joshzyj/open-scholar-skill

Builds the code for a frozen research experiment test-first, with leakage controls, seed handling and saved evidence so results can be rerun and audited.

Light0305/Light-skills

Turn a refined GIScience / remote sensing / spatial data science proposal into a detailed, claim-driven experiment roadmap.

GRIND-Lab-Core/night_owl_research_agent

Builds and validates PyHealth clinical machine-learning pipelines for EHR, signals, imaging, and medical codes.

K-Dense-AI/scientific-agent-skills

查询全球任意城市的实时天气和未来天气预报。当用户提到天气、气温、降雨、湿度、风力、穿衣建议、出行建议等天气相关话题时使用此技能。支持中英文城市名。例如：'北京天气怎么样'、'明天上海会下雨吗'、'Tokyo weather forecast'、'这周末适合户外活动吗'。

AgentTeam-TaichuAI/ScienceClaw

Calculates sample sizes and statistical power for study planning.

K-Dense-AI/scientific-agent-skills

Calculate Wilson Score confidence intervals for ranking items by positive proportion with sample size correction.

asgard-ai-platform/skills

Publication-quality checks and enhancements for high-impact journal submissions, including PRISMA/MOOSE reporting, robust meta-analysis diagnostics (Hartung-Knapp, prediction intervals, influence)…

htlin222/meta-pipe

Clean and transform messy data in Stata with reproducible workflows

meleantonio/awesome-econ-ai-stuff

Build sourced JSON dossiers on people, companies, or topics with DeepAPI.

davidondrej/skills

Design and analyze studies in sociolinguistics, language variation, acoustic phonetics, discourse analysis, language contact, and computational linguistics.

joshzyj/open-scholar-skill

Load when converting Ensembl, Entrez or symbol IDs in a bulk RNA count matrix using an explicit mapping or a small human demo reference.

TianGzlab/OmicsClaw

Performs constraint-based metabolic modeling with COBRApy, including FBA, pFBA, FVA, gene knockouts, flux sampling, growth media, production envelopes, gap filling, and SBML model validation for…

K-Dense-AI/scientific-agent-skills