GitHub organization

Agent skills by ClawBio, page 3

Skills #97–104 of 104, ranked by score.

Skills by ClawBio, ranked

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Skills by ClawBio, ranked
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97

Query metadata and download data from the PRIDE Archive, EMBL-EBI's proteomics identifications database, via the PRIDE Archive REST API v3.

ClawBio/ClawBio1.2k—~4.2kAutomated safety check: PassMITtoday
98

HLA allele typing from WGS/WES VCF data

ClawBio/ClawBio1.2k1 repo~1.8kAutomated safety check: PassMITtoday
99

Infers genetic super-population ancestry from a 23andMe/AncestryDNA file and computes ancestry-stratified odds ratios with an exploratory Ancestry Elevation Score (AES) showing where…

ClawBio/ClawBio1.2k—~5.8kAutomated safety check: PassMITtoday
100

16S/18S rRNA amplicon preprocessing — from raw paired-end FASTQ files through N removal and primer trimming, producing outputs ready for DADA2 quality filtering and denoising.

ClawBio/ClawBio1.2k—~6.4kAutomated safety check: PassMITtoday
101

Transcriptome-wide virtual spatial transcriptomics from H&E histology with DeepSpot-M.

ClawBio/ClawBio1.2k—~6.7kAutomated safety check: PassMITtoday
102

ClawBio wrapper around nf-core/sarek 3.8.1 covering mapping through annotation for germline, tumor-only, and somatic paired analyses.

ClawBio/ClawBio1.2k—~10kAutomated safety check: PassMITtoday
103

Wrapper skill for running nf-core/scrnaseq 4.1.0 upstream single-cell RNA-seq preprocessing from FASTQ with strict preflight, reproducibility outputs, and downstream handoff to ClawBio scRNA skills.

ClawBio/ClawBio1.2k—~13kAutomated safety check: PassMITtoday
104

Query metadata and download data from ArrayExpress, EMBL-EBI's functional genomics collection, now hosted inside BioStudies.

ClawBio/ClawBio1.2k—~5.7kAutomated safety check: PassMITtoday

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