Review R
brycewang-stanford/Auto-Empirical-Research-Skills
R code review for the sewage project. An agent skill from brycewang-stanford/Auto-Empirical-Research-Skills.
Read-only R code review protocol for .R scripts. An agent skill from pedrohcgs/claude-code-my-workflow.
Install Review R
$ npx skills add pedrohcgs/claude-code-my-workflow --skill review-r -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install pedrohcgs/claude-code-my-workflow review-r --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/pedrohcgs/claude-code-my-workflow.git skills-src && mkdir -p .claude/skills && cp -r skills-src/.claude/skills/review-r .claude/skills/review-r && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "review-r" agent skill from https://github.com/pedrohcgs/claude-code-my-workflow/tree/main/.claude/skills/review-r into .claude/skills/review-r/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "review-r", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/pedrohcgs/claude-code-my-workflow/tree/main/.claude/skills/review-rType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add pedrohcgs/claude-code-my-workflow --skill review-r -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install pedrohcgs/claude-code-my-workflow review-r --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/pedrohcgs/claude-code-my-workflow.git skills-src && mkdir -p .agents/skills && cp -r skills-src/.claude/skills/review-r .agents/skills/review-r && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "review-r" agent skill from https://github.com/pedrohcgs/claude-code-my-workflow/tree/main/.claude/skills/review-r into .agents/skills/review-r/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "review-r", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add pedrohcgs/claude-code-my-workflow --skill review-r -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install pedrohcgs/claude-code-my-workflow review-r --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/pedrohcgs/claude-code-my-workflow.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/.claude/skills/review-r .cursor/skills/review-r && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "review-r" agent skill from https://github.com/pedrohcgs/claude-code-my-workflow/tree/main/.claude/skills/review-r into .cursor/skills/review-r/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "review-r", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/pedrohcgs/claude-code-my-workflow.git --path .claude/skills/review-r--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add pedrohcgs/claude-code-my-workflow --skill review-r -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install pedrohcgs/claude-code-my-workflow review-r --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/pedrohcgs/claude-code-my-workflow.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/.claude/skills/review-r .gemini/skills/review-r && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "review-r" agent skill from https://github.com/pedrohcgs/claude-code-my-workflow/tree/main/.claude/skills/review-r into .gemini/skills/review-r/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "review-r", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install pedrohcgs/claude-code-my-workflow review-rInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add pedrohcgs/claude-code-my-workflow --skill review-r -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/pedrohcgs/claude-code-my-workflow.git skills-src && mkdir -p .github/skills && cp -r skills-src/.claude/skills/review-r .github/skills/review-r && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "review-r" agent skill from https://github.com/pedrohcgs/claude-code-my-workflow/tree/main/.claude/skills/review-r into .github/skills/review-r/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "review-r", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add pedrohcgs/claude-code-my-workflow --skill review-r -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install pedrohcgs/claude-code-my-workflow review-r --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/pedrohcgs/claude-code-my-workflow.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/.claude/skills/review-r .opencode/skills/review-r && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "review-r" agent skill from https://github.com/pedrohcgs/claude-code-my-workflow/tree/main/.claude/skills/review-r into .opencode/skills/review-r/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "review-r", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
Facts
- Skill name
review-r- GitHub stars
- 1.7k
- Token cost
- ~430 tokens
- SKILL.md length
- 149 words
- Files
- 1
- Skills in repo
- 59
- Repo updated
- First seen
- Licence
- MIT
At a glance
Read-only R code review protocol for .R scripts. An agent skill from pedrohcgs/claude-code-my-workflow.
- Works in 4 steps: Identify scripts to review → For each script, launch the r-reviewer… → After all reviews complete, present a… → …
- User says review this R script
- Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md
- Check the R code
What it does
Review R is an agent skill from pedrohcgs/claude-code-my-workflow. Read-only R code review protocol for .R scripts. Checks code quality, reproducibility, domain correctness, tidyverse idioms, and professional standards; produces a report without editing. Use when user says "review this R script", "check the R code", "audit the analysis code", "code review on the R", or when an R file is touched as part of a paper submission. NOT for running the code — pair with /audit-reproducibility for numeric verification.
Its SKILL.md is about 430 tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
It sits in Development, covering Reproducible research, Code quality and Code review. The repository describes itself as: A ready-to-fork Claude Code template for academics using LaTeX/Beamer + R. Multi-agent review, quality gates, adversarial QA, and replication protocols. The licence is MIT.
When your agent uses it
- User says review this R script
- Check the R code
- Audit the analysis code
- Code review on the R
Example prompts
- “review this R script”
- “check the R code”
- “audit the analysis code”
- “/review-r”
Requirements
- Pre-approved tools (allowed-tools): Read, Grep, Glob, Write, Agent, Task
Workflow steps
4 steps, taken from the first numbered list in SKILL.md.
- Identify scripts to review
- For each script, launch the r-reviewer agent with instructions to
- After all reviews complete, present a summary
- Leave the R source files unchanged — the report goes to the user, who decides what to fix.
What it can do on your machine
Read from SKILL.md and the folder at commit ae72617. It shows what the files ask for, not the result of running them.
Tool permissions
Pre-approves these tools, so the agent can use them without asking each time:
ReadGrepGlobWriteAgentTask
From allowed-tools in the SKILL.md frontmatter.
Runs code
No scripts in the folder and no shell commands in SKILL.md.
From the folder's file list and the shell code blocks in SKILL.md.
Network
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Credentials
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Context cost
Review R loads about 430 tokens when it runs. Until then it costs about 115 tokens; SKILL.md has 149 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
Safety
Auto-check passed
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
SKILL.md
The full file from pedrohcgs/claude-code-my-workflow at commit ae72617, republished under its MIT licence (© pedrohcgs). 149 words, ~430 tokens.
Download SKILL.mdSave it as
.claude/skills/review-r/SKILL.md (or your agent's skills folder).- name
- review-r
- description
- Read-only R code review protocol for `.R` scripts. Checks code quality, reproducibility, domain correctness, tidyverse idioms, and professional standards; produces a report without editing. Use when user says "review this R script", "check the R code", "audit the analysis code", "code review on the R", or when an R file is touched as part of a paper submission. NOT for running the code — pair with `/audit-reproducibility` for numeric verification.
- allowed-tools
- Read, Grep, Glob, Write, Agent, Task
- argument-hint
- [filename or 'all' or 'LectureN']
- disallowed-tools
- Edit, MultiEdit
Review R Scripts
Run the comprehensive R code review protocol.
Steps
Identify scripts to review:
- If
$ARGUMENTSis a specific.Rfilename: review that file only - If
$ARGUMENTSisLectureN: review all R scripts matching that lecture - If
$ARGUMENTSisall: review all R scripts inscripts/R/andFigures/*/
- If
For each script, launch the
r-revieweragent with instructions to:- Follow the full protocol in the agent instructions
- Read
.claude/rules/r-code-conventions.mdfor current standards - Return its report as its final response (ending with the findings
jsonblock); this skill saves it toquality_reports/[script_name]_r_review.md— the agent is read-only
After all reviews complete, present a summary:
- Total issues found per script
- Breakdown by severity (Critical / High / Medium / Low)
- Top 3 most critical issues
Leave the R source files unchanged — the report goes to the user, who decides what to fix. Only produce reports. Fixes are applied after user review.
© pedrohcgs, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
Files
Just SKILL.md in .claude/skills/review-r of pedrohcgs/claude-code-my-workflow.
Open the folder on GitHubat commit ae72617
Compare with similar skills
Review R next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Review R this skillpedrohcgs/claude-code-my-workflow | 1.7k | — | ~430 | Automated safety check: Pass | MIT | |
| Review Rbrycewang-stanford/Auto-Empirical-Research-Skills | 4.6k | — | ~1.3k | Automated safety check: Pass | Custom licence | |
| WooCommerce Code Reviewwoocommerce/woocommerce | 11k | 3 repos | ~1.1k | Automated safety check: Pass | Custom licence | |
| Skill Doli Code ReviewDolibarr/dolibarr | 7.7k | 1 repos | ~1.1k | Automated safety check: Pass | MIT | |
| Dignified Python Standardsdocling-project/docling | 69k | — | ~1.5k | Automated safety check: Pass | Apache-2.0 | |
| Clean Code GuardamElnagdy/guard-skills | 1.3k | 2 repos | ~4.3k | Automated safety check: Pass | MIT |
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Related
Categories
Questions about Review R
What does Review R do?
Read-only R code review protocol for .R scripts. An agent skill from pedrohcgs/claude-code-my-workflow. Review R is an agent skill from pedrohcgs/claude-code-my-workflow.R scripts.
When should I use Review R?
Review R fits situations like: user says review this R script; check the R code; audit the analysis code; code review on the R.
How do I install Review R in Claude Code?
Run `npx skills add pedrohcgs/claude-code-my-workflow --skill review-r -a claude-code`. Or copy the skill folder (.claude/skills/review-r in pedrohcgs/claude-code-my-workflow) into .claude/skills/review-r in your project. Claude Code loads it when a task matches its description.
How do I install Review R in Codex?
Run `npx skills add pedrohcgs/claude-code-my-workflow --skill review-r -a codex`. Or copy the skill folder (.claude/skills/review-r in pedrohcgs/claude-code-my-workflow) into .agents/skills/review-r in your project. Codex loads it when a task matches its description.
Can I use Review R in Cursor, Gemini CLI or GitHub Copilot?
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add pedrohcgs/claude-code-my-workflow --skill review-r -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/review-r, .gemini/skills/review-r, .github/skills/review-r and .opencode/skills/review-r in your project.
What does Review R need to run?
SKILL.md names no scripts, command-line tools or credentials: Review R is instructions for the agent only. Its frontmatter pre-approves these tools: Read, Grep, Glob, Write, Agent, Task.
Does Review R access the network?
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Is Review R safe to install?
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
What licence does Review R use?
Review R is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
How many tokens does Review R use?
About 430 tokens (SKILL.md is roughly 1.7k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
What are the alternatives to Review R?
Skills that share tags, products or a category with Review R: Review R (brycewang-stanford/Auto-Empirical-Research-Skills, 4.6k stars), WooCommerce Code Review (woocommerce/woocommerce, 11k stars), Skill Doli Code Review (Dolibarr/dolibarr, 7.7k stars) and Dignified Python Standards (docling-project/docling, 69k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
Who maintains Review R?
pedrohcgs (a GitHub user) maintains it in pedrohcgs/claude-code-my-workflow, which has 1,655 GitHub stars. The repository holds 59 skills in this directory. The repository was last updated on September 27, 2026.
Source: pedrohcgs/claude-code-my-workflow on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.