GitHub Deep Research
bytedance/deer-flow
Researches a GitHub repository over four rounds using the GitHub API and web search, then writes a structured markdown report with timeline, metrics and Mermaid diagrams.
Validate and maintain module registry. An agent skill from htlin222/meta-pipe.
Install Module Management
$ npx skills add htlin222/meta-pipe --skill module-management -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install htlin222/meta-pipe module-management --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/htlin222/meta-pipe.git skills-src && mkdir -p .claude/skills && cp -r skills-src/.claude/skills/module-management .claude/skills/module-management && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "module-management" agent skill from https://github.com/htlin222/meta-pipe/tree/main/.claude/skills/module-management into .claude/skills/module-management/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "module-management", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/htlin222/meta-pipe/tree/main/.claude/skills/module-managementType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add htlin222/meta-pipe --skill module-management -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install htlin222/meta-pipe module-management --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/htlin222/meta-pipe.git skills-src && mkdir -p .agents/skills && cp -r skills-src/.claude/skills/module-management .agents/skills/module-management && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "module-management" agent skill from https://github.com/htlin222/meta-pipe/tree/main/.claude/skills/module-management into .agents/skills/module-management/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "module-management", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add htlin222/meta-pipe --skill module-management -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install htlin222/meta-pipe module-management --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/htlin222/meta-pipe.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/.claude/skills/module-management .cursor/skills/module-management && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "module-management" agent skill from https://github.com/htlin222/meta-pipe/tree/main/.claude/skills/module-management into .cursor/skills/module-management/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "module-management", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/htlin222/meta-pipe.git --path .claude/skills/module-management--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add htlin222/meta-pipe --skill module-management -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install htlin222/meta-pipe module-management --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/htlin222/meta-pipe.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/.claude/skills/module-management .gemini/skills/module-management && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "module-management" agent skill from https://github.com/htlin222/meta-pipe/tree/main/.claude/skills/module-management into .gemini/skills/module-management/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "module-management", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install htlin222/meta-pipe module-managementInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add htlin222/meta-pipe --skill module-management -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/htlin222/meta-pipe.git skills-src && mkdir -p .github/skills && cp -r skills-src/.claude/skills/module-management .github/skills/module-management && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "module-management" agent skill from https://github.com/htlin222/meta-pipe/tree/main/.claude/skills/module-management into .github/skills/module-management/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "module-management", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add htlin222/meta-pipe --skill module-management -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install htlin222/meta-pipe module-management --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/htlin222/meta-pipe.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/.claude/skills/module-management .opencode/skills/module-management && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "module-management" agent skill from https://github.com/htlin222/meta-pipe/tree/main/.claude/skills/module-management into .opencode/skills/module-management/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "module-management", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
Facts
- Skill name
module-management- GitHub stars
- 134
- Token cost
- ~1.1k tokens
- SKILL.md length
- 406 words
- Files
- 1
- Skills in repo
- 15
- Repo updated
- First seen
- Licence
- Custom licence
At a glance
Validate and maintain module registry. An agent skill from htlin222/meta-pipe.
- Works in 7 steps: Create the script → Update Module SKILL.md → Update CLAUDE.md → …
- Research & Science work in your project
- SKILL.md covers Purpose, When to Use, Validation Layers and Workflow: Adding a New Script, plus 4 more sections
- Calls uv
What it does
Module Management is an agent skill from htlin222/meta-pipe. Validate and maintain module registry. Use after adding new scripts, features, or modules to ensure proper documentation and integration.
Its SKILL.md is about 1.1k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
It sits in Research & Science. It works with Python. The repository describes itself as: Claude Code-powered end-to-end meta-analysis automation: AI-assisted literature review, screening, extraction, analysis, and manuscript generation for systematic reviews and….
When your agent uses it
- Research & Science work in your project
Example prompts
- “/module-management”
Requirements
- Python 3
Workflow steps
7 steps, taken from the step headings in SKILL.md.
- Create the script
- Update Module SKILL.md
- Update CLAUDE.md
- Update GETTING_STARTED.md
- Update tests/README.md
- Run validation
- Smoke test
What it can do on your machine
Read from SKILL.md and the folder at commit 5c5c3f0. It shows what the files ask for, not the result of running them.
Tool permissions
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Runs code
Shell commands in SKILL.md call:
uv
From the folder's file list and the shell code blocks in SKILL.md.
Network
No URLs in SKILL.md. Its commands use uv, which can reach the network depending on how they are called.
From URLs in SKILL.md, links to its own repository left out.
Credentials
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Context cost
Module Management loads about 1.1k tokens when it runs. Until then it costs about 39 tokens; SKILL.md has 406 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
Safety
Auto-check passed
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
SKILL.md
Its licence (Custom licence) doesn't allow us to republish the file, so here is its outline and opening line. It has 406 words (~1,104 tokens).
“Ensure every new script, template, or feature is properly registered across all documentation layers. Prevents "orphan scripts" (undocumented code) and "ghost references" (docs pointing to non-existent files).”
- name
- module-management
Files
Just SKILL.md in .claude/skills/module-management of htlin222/meta-pipe.
Open the folder on GitHubat commit 5c5c3f0
Compare with similar skills
Module Management next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Module Management this skillhtlin222/meta-pipe | 134 | — | ~1.1k | Automated safety check: Pass | Custom licence | |
| GitHub Deep Researchbytedance/deer-flow | 83k | 5 repos | ~1.3k | Automated safety check: Pass | MIT | |
| NetworkxzLanqing/codex-claude-academic-skills | 4.6k | 16 repos | ~3.2k | Automated safety check: Pass | BSD-3-Clause | |
| Nature-Style Scientific FiguresYuan1z0825/nature-skills | 46k | — | ~2.9k | Automated safety check: Pass | Apache-2.0 | |
| Preprint Search on bioRxivLigphiDonk/Oh-my--paper | 738 | 13 repos | ~3.7k | Automated safety check: Pass | MIT | |
| Neuropixels Data Analysisdavila7/claude-code-templates | 32k | 10 repos | ~2.8k | Automated safety check: Pass | MIT |
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zLanqing/codex-claude-academic-skills
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Nature-Style Scientific Figures
Yuan1z0825/nature-skills
Creates, revises, audits and exports manuscript-ready scientific figures in Python or R, and routes AI-generated graphical abstracts to a separate workflow.
Preprint Search on bioRxiv
LigphiDonk/Oh-my--paper
Searches bioRxiv life sciences preprints by keyword, author, date range or category with a Python script, returning JSON metadata and optional PDF downloads.
Neuropixels Data Analysis
davila7/claude-code-templates
Analyzes Neuropixels recordings from SpikeGLX or Open Ephys through preprocessing, drift correction, Kilosort4 spike sorting, quality metrics and curation.
Citation Management
K-Dense-AI/claude-scientific-writer
Finds papers in OpenAlex, PubMed and Google Scholar, turns DOIs, PMIDs and arXiv IDs into clean BibTeX, and validates citations for a manuscript or thesis.
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All 15 skills in this repoMa Data Extraction
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Define extraction schema, extract study data from full texts, and store it in a structured database for meta-analysis.
Ma End To End
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End-to-end AI-assisted meta-analysis pipeline orchestration from TOPIC.txt to final manuscript and reviewer responses.
Ma Fulltext Management
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Collect and manage full-text PDFs for included studies, track provenance, and prepare documents for extraction.
Ma Screening Quality
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Perform title and abstract screening, apply inclusion and exclusion criteria, and assess study quality or risk of bias.
Ma Search Bibliography
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Conduct literature searches for meta-analysis using Python with uv, query PubMed and other databases, deduplicate results, and store round-based bibliographies with notes.
Ma Manuscript Quarto
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Draft and render a meta-analysis manuscript with Quarto using an IMRaD structure and embedded figures/tables.
Related
Works with
Categories
Questions about Module Management
What does Module Management do?
Validate and maintain module registry. An agent skill from htlin222/meta-pipe. Module Management is an agent skill from htlin222/meta-pipe. Validate and maintain module registry.
When should I use Module Management?
Module Management fits situations like: research & Science work in your project.
How do I install Module Management in Claude Code?
Run `npx skills add htlin222/meta-pipe --skill module-management -a claude-code`. Or copy the skill folder (.claude/skills/module-management in htlin222/meta-pipe) into .claude/skills/module-management in your project. Claude Code loads it when a task matches its description.
How do I install Module Management in Codex?
Run `npx skills add htlin222/meta-pipe --skill module-management -a codex`. Or copy the skill folder (.claude/skills/module-management in htlin222/meta-pipe) into .agents/skills/module-management in your project. Codex loads it when a task matches its description.
Can I use Module Management in Cursor, Gemini CLI or GitHub Copilot?
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add htlin222/meta-pipe --skill module-management -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/module-management, .gemini/skills/module-management, .github/skills/module-management and .opencode/skills/module-management in your project.
What does Module Management need to run?
Going by SKILL.md and its folder, Module Management needs the command-line tools its instructions call (uv). Our summary lists: Python 3.
Does Module Management access the network?
SKILL.md contains no URLs. Its commands use uv, which can reach the network depending on how they are called. This is read from the text; nothing was executed.
Is Module Management safe to install?
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
What licence does Module Management use?
Module Management has a licence file (the repository's licence) that doesn't match a standard licence. Read it on GitHub before reusing the skill.
How many tokens does Module Management use?
About 1.1k tokens (SKILL.md is roughly 4.4k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
What are the alternatives to Module Management?
Skills that share tags, products or a category with Module Management: GitHub Deep Research (bytedance/deer-flow, 83k stars), Networkx (zLanqing/codex-claude-academic-skills, 4.6k stars), Nature-Style Scientific Figures (Yuan1z0825/nature-skills, 46k stars) and Preprint Search on bioRxiv (LigphiDonk/Oh-my--paper, 738 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
Who maintains Module Management?
htlin222 (a GitHub user) maintains it in htlin222/meta-pipe, which has 134 GitHub stars. The repository holds 15 skills in this directory. The repository was last updated on September 23, 2026.
Source: htlin222/meta-pipe on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.