Run and monitor PapersFlow DeepScan jobs. An agent skill from hashgraph-online/awesome-codex-plugins.

Apache-2.0Auto-check passedData & Analytics

Install Deepscan Monitor

skills CLI
$ npx skills add hashgraph-online/awesome-codex-plugins --skill deepscan-monitor -a claude-code

Project install by default; add -g for ~/.claude/skills/.

GitHub CLI
$ gh skill install hashgraph-online/awesome-codex-plugins deepscan-monitor --agent claude-code

Project scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).

Manual copy
$ git clone --depth 1 https://github.com/hashgraph-online/awesome-codex-plugins.git skills-src && mkdir -p .claude/skills && cp -r skills-src/plugins/papersflow-ai/papersflow-codex-plugin/skills/deepscan-monitor .claude/skills/deepscan-monitor && rm -rf skills-src

Use ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.

Claude Code skills documentation · loads skills from .claude/skills/

Facts

Skill name
deepscan-monitor
GitHub stars
1.3k
Token cost
~601 tokens
SKILL.md length
311 words
Files
1
Skills in repo
716
Repo updated
First seen
Licence
Apache-2.0

At a glance

Run and monitor PapersFlow DeepScan jobs. An agent skill from hashgraph-online/awesome-codex-plugins.

  • Works in 7 steps: Use run_deepscan to start the job. → Immediately tell the user that the run… → Poll with get_deepscan_live_snapshot for… → …
  • The user wants long-running research progress
  • SKILL.md covers Workflow, Important Behavior, Progress Update Style and Plotting Guidance, plus 1 more section
  • Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md

What it does

Deepscan Monitor is an agent skill from hashgraph-online/awesome-codex-plugins. Run and monitor PapersFlow DeepScan jobs. Use when the user wants long-running research progress, intermediate findings, final reports, or plotting from a completed run.

Its SKILL.md is about 600 tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.

It sits in Data & Analytics, covering Data visualization. The repository describes itself as: A curated list of awesome OpenAI Codex / ChatGPT plugins, skills, and resources. The 1 Codex Marketplace. See live plugins at: https://hol.org/plugins/best-codex-plugins. The licence is Apache-2.0.

When your agent uses it

  • The user wants long-running research progress
  • Intermediate findings
  • Plotting from a completed run

Example prompts

  • “/deepscan-monitor”

Workflow steps

7 steps, taken from the first numbered list in SKILL.md.

  1. Use run_deepscan to start the job.
  2. Immediately tell the user that the run is asynchronous.
  3. Poll with get_deepscan_live_snapshot for the best live view of
  4. Fall back to get_deepscan_status if the user only wants lightweight progress checks.
  5. Once finalReportAvailable is true or the run is completed, call get_deepscan_report.
  6. Use summarize_evidence when the user wants a cross-report summary from stored DeepScan history.
  7. Use run_python_plot only after you have stable report data worth plotting.

What it can do on your machine

Read from SKILL.md and the folder at commit 3e1456a. It shows what the files ask for, not the result of running them.

  • Tool permissions

    Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.

    From allowed-tools in the SKILL.md frontmatter.

  • Runs code

    No scripts in the folder and no shell commands in SKILL.md.

    From the folder's file list and the shell code blocks in SKILL.md.

  • Network

    No URLs in SKILL.md.

    From URLs in SKILL.md, links to its own repository left out.

  • Credentials

    Names no API keys, tokens, secrets or passwords.

    From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.

Context cost

Deepscan Monitor loads about 601 tokens when it runs. Until then it costs about 47 tokens; SKILL.md has 311 words of instructions outside code blocks.

Always · name and description, kept in context so the agent knows when to use it
~47
When it runs · the whole SKILL.md, loaded when a task matches
~601

Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.

Safety

Auto-check passed

The automated check found no risky patterns in SKILL.md.

Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.

SKILL.md

The full file from hashgraph-online/awesome-codex-plugins at commit 3e1456a, republished under its Apache-2.0 licence (© hashgraph-online). 311 words, ~601 tokens.

Download SKILL.mdSave it as .claude/skills/deepscan-monitor/SKILL.md (or your agent's skills folder).
name
deepscan-monitor
description
Run and monitor PapersFlow DeepScan jobs. Use when the user wants long-running research progress, intermediate findings, final reports, or plotting from a completed run.

DeepScan Monitor

Use this skill when the user wants Claude to manage a longer-running PapersFlow research workflow instead of a single search call.

Workflow

  1. Use run_deepscan to start the job.
  2. Immediately tell the user that the run is asynchronous.
  3. Poll with get_deepscan_live_snapshot for the best live view of:
    • progress
    • status message
    • checkpoint state
    • top papers
    • partial summary
    • key findings
  4. Fall back to get_deepscan_status if the user only wants lightweight progress checks.
  5. Once finalReportAvailable is true or the run is completed, call get_deepscan_report.
  6. Use summarize_evidence when the user wants a cross-report summary from stored DeepScan history.
  7. Use run_python_plot only after you have stable report data worth plotting.

Important Behavior

  • Do not imply the MCP server will push completion notifications into Claude automatically.
  • Poll deliberately and explain that the run is being checked.
  • Prefer get_deepscan_live_snapshot over get_deepscan_status when the user wants richer live information.
  • If a report is not ready yet, say that clearly and keep the next action obvious.

Progress Update Style

When a run is still active, summarize:

  • current status
  • progress percentage
  • current stage or status message
  • any checkpoint question
  • notable live papers
  • key findings if available

Keep updates brief unless the user asks for more detail.

Plotting Guidance

Use run_python_plot only for meaningful visualizations after you have stable report outputs, for example:

  • papers by year
  • citation distribution
  • venue distribution
  • grouped comparison across a small number of finished runs

Do not generate plots for sparse or obviously low-quality data without saying so.

Examples

  • User asks: "Run a DeepScan on evaluation benchmarks for agentic retrieval systems and keep me posted."
  • User asks: "Check how my DeepScan is progressing and tell me the key findings so far."
  • User asks: "The run is finished, summarize the final report and plot papers by year."
  • User asks: "Summarize the evidence from my recent DeepScan reports on protein structure prediction."

© hashgraph-online, Apache-2.0. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file

Files

Just SKILL.md in plugins/papersflow-ai/papersflow-codex-plugin/skills/deepscan-monitor of hashgraph-online/awesome-codex-plugins.

Open the folder on GitHubat commit 3e1456a

Compare with similar skills

Deepscan Monitor next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.

Deepscan Monitor compared with similar skills
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Deepscan Monitor this skillhashgraph-online/awesome-codex-plugins1.3k—~601Automated safety check: PassApache-2.0
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Chart Visualizationbytedance/deer-flow84k1 repos~840Automated safety check: PassMIT
Scientific Visualizationmims-harvard/OptimusKG14719 repos~6.3kAutomated safety check: PassMIT
SeabornzLanqing/codex-claude-academic-skills4.7k15 repos~4.9kAutomated safety check: PassBSD-3-Clause
Plot From DataTrae1ounG/paper-plot-skills8721 repos~583Automated safety check: PassNone

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Questions about Deepscan Monitor

What does Deepscan Monitor do?

Run and monitor PapersFlow DeepScan jobs. An agent skill from hashgraph-online/awesome-codex-plugins. Deepscan Monitor is an agent skill from hashgraph-online/awesome-codex-plugins. Run and monitor PapersFlow DeepScan jobs.

When should I use Deepscan Monitor?

Deepscan Monitor fits situations like: the user wants long-running research progress; intermediate findings; plotting from a completed run.

How do I install Deepscan Monitor in Claude Code?

Run `npx skills add hashgraph-online/awesome-codex-plugins --skill deepscan-monitor -a claude-code`. Or copy the skill folder (plugins/papersflow-ai/papersflow-codex-plugin/skills/deepscan-monitor in hashgraph-online/awesome-codex-plugins) into .claude/skills/deepscan-monitor in your project. Claude Code loads it when a task matches its description.

How do I install Deepscan Monitor in Codex?

Run `npx skills add hashgraph-online/awesome-codex-plugins --skill deepscan-monitor -a codex`. Or copy the skill folder (plugins/papersflow-ai/papersflow-codex-plugin/skills/deepscan-monitor in hashgraph-online/awesome-codex-plugins) into .agents/skills/deepscan-monitor in your project. Codex loads it when a task matches its description.

Can I use Deepscan Monitor in Cursor, Gemini CLI or GitHub Copilot?

Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add hashgraph-online/awesome-codex-plugins --skill deepscan-monitor -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/deepscan-monitor, .gemini/skills/deepscan-monitor, .github/skills/deepscan-monitor and .opencode/skills/deepscan-monitor in your project.

What does Deepscan Monitor need to run?

SKILL.md names no scripts, command-line tools or credentials: Deepscan Monitor is instructions for the agent only.

Does Deepscan Monitor access the network?

SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.

Is Deepscan Monitor safe to install?

Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.

What licence does Deepscan Monitor use?

Deepscan Monitor is published under the Apache-2.0 licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.

How many tokens does Deepscan Monitor use?

About 601 tokens (SKILL.md is roughly 2.4k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.

What are the alternatives to Deepscan Monitor?

Skills that share tags, products or a category with Deepscan Monitor: Matplotlib (zLanqing/codex-claude-academic-skills, 4.7k stars), Chart Visualization (bytedance/deer-flow, 84k stars), Scientific Visualization (mims-harvard/OptimusKG, 147 stars) and Seaborn (zLanqing/codex-claude-academic-skills, 4.7k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.

Who maintains Deepscan Monitor?

hashgraph-online (a GitHub organization) maintains it in hashgraph-online/awesome-codex-plugins, which has 1,267 GitHub stars. The repository holds 716 skills in this directory. The repository was last updated on October 10, 2026.

Source: hashgraph-online/awesome-codex-plugins on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.