Agent skill

Bio Ribo Seq Ribosome Stalling

by FreedomIntelligence in FreedomIntelligence/OpenClaw-Medical-Skills

Detect ribosome pausing and stalling sites from Ribo-seq data at codon resolution.

No licenceAuto-check passedWriting & Content

Install Bio Ribo Seq Ribosome Stalling

skills CLI
$ npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-ribo-seq-ribosome-stalling -a claude-code

Project install by default; add -g for ~/.claude/skills/.

GitHub CLI
$ gh skill install FreedomIntelligence/OpenClaw-Medical-Skills bio-ribo-seq-ribosome-stalling --agent claude-code

Project scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).

Manual copy
$ git clone --depth 1 https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/bio-ribo-seq-ribosome-stalling .claude/skills/bio-ribo-seq-ribosome-stalling && rm -rf skills-src

Use ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.

Claude Code skills documentation · loads skills from .claude/skills/

Facts

Skill name
bio-ribo-seq-ribosome-stalling
GitHub stars
3.1k
Used in
1 other repo
Token cost
~1.8k tokens
SKILL.md length
325 words
Files
3
Skills in repo
279
Repo updated
First seen
Licence
None found

At a glance

Detect ribosome pausing and stalling sites from Ribo-seq data at codon resolution.

  • Studying translational regulation
  • SKILL.md covers Version Compatibility, Concept, Calculate Codon-Level Occupancy and Identify Pause Sites, plus 5 more sections
  • Runs Python scripts from its folder; calls pip
  • Identifying pause sites

What it does

Bio Ribo Seq Ribosome Stalling is an agent skill from FreedomIntelligence/OpenClaw-Medical-Skills. Detect ribosome pausing and stalling sites from Ribo-seq data at codon resolution. Use when studying translational regulation, identifying pause sites, or analyzing codon-specific translation dynamics.

Its SKILL.md is about 1.8k tokens, which your agent loads only when the skill is triggered. The skill folder holds 3 other files (for example `examples/detect_stalling.py` and `usage-guide.md`).

It sits in Writing & Content, covering Translation. The repository describes itself as: The largest open-source medical AI skills library for OpenClaw🦞.

When your agent uses it

  • Studying translational regulation
  • Identifying pause sites
  • Analyzing codon-specific translation dynamics

Example prompts

  • “/bio-ribo-seq-ribosome-stalling”

Requirements

  • Python 3

What it can do on your machine

Read from SKILL.md and the folder at commit b1f9b6e. It shows what the files ask for, not the result of running them.

  • Tool permissions

    Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.

    From allowed-tools in the SKILL.md frontmatter.

  • Runs code

    Ships script files (Python), which the agent can run.

    Shell commands in SKILL.md call:

    • pip

    From the folder's file list and the shell code blocks in SKILL.md.

  • Network

    No URLs in SKILL.md. Its commands use pip, which can reach the network depending on how they are called.

    From URLs in SKILL.md, links to its own repository left out.

  • Credentials

    Names no API keys, tokens, secrets or passwords.

    From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.

Context cost

Bio Ribo Seq Ribosome Stalling loads about 1.8k tokens when it runs. Until then it costs about 58 tokens; SKILL.md has 325 words of instructions outside code blocks.

Always · name and description, kept in context so the agent knows when to use it
~58
When it runs · the whole SKILL.md, loaded when a task matches
~1.8k

Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.

Safety

Auto-check passed

The automated check found no risky patterns in SKILL.md.

Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.

SKILL.md

Without a licence we can't republish the file, so here is its outline and opening line. It has 325 words (~1,752 tokens).

“Reference examples tested with: BioPython 1.83+, numpy 1.26+, scipy 1.12+”

— opening of SKILL.md by FreedomIntelligence
name
bio-ribo-seq-ribosome-stalling
tool_type
python
primary_tool
Plastid

Read the full SKILL.md on GitHub

Files

SKILL.md and 2 other files in skills/bio-ribo-seq-ribosome-stalling of FreedomIntelligence/OpenClaw-Medical-Skills.

  • SKILL.md
  • examples/detect_stalling.py
  • usage-guide.md

Open the folder on GitHubat commit b1f9b6e

Used in 1 other repository

We found 1 copy of this SKILL.md (exact, near-identical or edited) in other folders, from 1 other GitHub owner. This page covers the copy in FreedomIntelligence/OpenClaw-Medical-Skills, which our catalogue first saw on October 7, 2026.

Compare with similar skills

Bio Ribo Seq Ribosome Stalling next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.

Bio Ribo Seq Ribosome Stalling compared with similar skills
SkillStarsUsed inTokensAuto-checkLicenceRepo updated
Bio Ribo Seq Ribosome Stalling this skillFreedomIntelligence/OpenClaw-Medical-Skills3.1k1 repos~1.8kAutomated safety check: PassNone
Translation Diff ExportDevolutions/UniGetUI26k—~1.1kAutomated safety check: PassMIT
Sync Translationssymfony/symfony31k—~1.9kAutomated safety check: PassMIT
Translation Diff ImportDevolutions/UniGetUI26k—~750Automated safety check: PassMIT
Translation Diff TranslateDevolutions/UniGetUI26k—~934Automated safety check: PassMIT
Generate Translationspayloadcms/payload45k—~1.1kAutomated safety check: PassMIT

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Questions about Bio Ribo Seq Ribosome Stalling

What does Bio Ribo Seq Ribosome Stalling do?

Detect ribosome pausing and stalling sites from Ribo-seq data at codon resolution. Bio Ribo Seq Ribosome Stalling is an agent skill from FreedomIntelligence/OpenClaw-Medical-Skills. Detect ribosome pausing and stalling sites from Ribo-seq data at codon resolution.

When should I use Bio Ribo Seq Ribosome Stalling?

Bio Ribo Seq Ribosome Stalling fits situations like: studying translational regulation; identifying pause sites; analyzing codon-specific translation dynamics.

How do I install Bio Ribo Seq Ribosome Stalling in Claude Code?

Run `npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-ribo-seq-ribosome-stalling -a claude-code`. Or copy the skill folder (skills/bio-ribo-seq-ribosome-stalling in FreedomIntelligence/OpenClaw-Medical-Skills) into .claude/skills/bio-ribo-seq-ribosome-stalling in your project. Claude Code loads it when a task matches its description.

How do I install Bio Ribo Seq Ribosome Stalling in Codex?

Run `npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-ribo-seq-ribosome-stalling -a codex`. Or copy the skill folder (skills/bio-ribo-seq-ribosome-stalling in FreedomIntelligence/OpenClaw-Medical-Skills) into .agents/skills/bio-ribo-seq-ribosome-stalling in your project. Codex loads it when a task matches its description.

Can I use Bio Ribo Seq Ribosome Stalling in Cursor, Gemini CLI or GitHub Copilot?

Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-ribo-seq-ribosome-stalling -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/bio-ribo-seq-ribosome-stalling, .gemini/skills/bio-ribo-seq-ribosome-stalling, .github/skills/bio-ribo-seq-ribosome-stalling and .opencode/skills/bio-ribo-seq-ribosome-stalling in your project.

What does Bio Ribo Seq Ribosome Stalling need to run?

Going by SKILL.md and its folder, Bio Ribo Seq Ribosome Stalling needs Python for the scripts in its folder and the command-line tools its instructions call (pip). Our summary lists: Python 3.

Does Bio Ribo Seq Ribosome Stalling access the network?

SKILL.md contains no URLs. Its commands use pip, which can reach the network depending on how they are called. This is read from the text; nothing was executed.

Is Bio Ribo Seq Ribosome Stalling safe to install?

Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.

What licence does Bio Ribo Seq Ribosome Stalling use?

No licence was found for Bio Ribo Seq Ribosome Stalling or its repository. Without one, default copyright applies: ask the author before reusing or redistributing it.

How many tokens does Bio Ribo Seq Ribosome Stalling use?

About 1.8k tokens (SKILL.md is roughly 7k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.

What are the alternatives to Bio Ribo Seq Ribosome Stalling?

Skills that share tags, products or a category with Bio Ribo Seq Ribosome Stalling: Translation Diff Export (Devolutions/UniGetUI, 26k stars), Sync Translations (symfony/symfony, 31k stars), Translation Diff Import (Devolutions/UniGetUI, 26k stars) and Translation Diff Translate (Devolutions/UniGetUI, 26k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.

Who maintains Bio Ribo Seq Ribosome Stalling?

FreedomIntelligence (a GitHub organization) maintains it in FreedomIntelligence/OpenClaw-Medical-Skills, which has 3,052 GitHub stars. The repository holds 279 skills in this directory. The repository was last updated on July 21, 2026.

Source: FreedomIntelligence/OpenClaw-Medical-Skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.