Extract, filter, annotate, and export differential expression results from DESeq2 or edgeR.

No licenceAuto-check passedData & Analytics

Install Bio De Results

skills CLI
$ npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-de-results -a claude-code

Project install by default; add -g for ~/.claude/skills/.

GitHub CLI
$ gh skill install FreedomIntelligence/OpenClaw-Medical-Skills bio-de-results --agent claude-code

Project scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).

Manual copy
$ git clone --depth 1 https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/bio-de-results .claude/skills/bio-de-results && rm -rf skills-src

Use ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.

Claude Code skills documentation · loads skills from .claude/skills/

Facts

Skill name
bio-de-results
GitHub stars
3.1k
Used in
1 other repo
Token cost
~2.6k tokens
SKILL.md length
484 words
Files
5
Skills in repo
279
Repo updated
First seen
Licence
None found

At a glance

Extract, filter, annotate, and export differential expression results from DESeq2 or edgeR.

  • Identifying significant genes
  • SKILL.md covers Version Compatibility, Required Libraries, Extracting DESeq2 Results and Extracting edgeR Results, plus 10 more sections
  • Runs R scripts from its folder
  • Applying multiple testing corrections

What it does

Bio De Results is an agent skill from FreedomIntelligence/OpenClaw-Medical-Skills. Extract, filter, annotate, and export differential expression results from DESeq2 or edgeR. Use for identifying significant genes, applying multiple testing corrections, adding gene annotations, and preparing results for downstream analysis. Use when filtering and exporting DE analysis results.

Its SKILL.md is about 2.6k tokens, which your agent loads only when the skill is triggered. The skill folder holds 5 other files (for example `usage-guide.md`).

It sits in Data & Analytics, covering Statistics. The repository describes itself as: The largest open-source medical AI skills library for OpenClaw🦞.

When your agent uses it

  • Identifying significant genes
  • Applying multiple testing corrections
  • Adding gene annotations
  • Preparing results for downstream analysis

Example prompts

  • “/bio-de-results”

What it can do on your machine

Read from SKILL.md and the folder at commit b1f9b6e. It shows what the files ask for, not the result of running them.

  • Tool permissions

    Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.

    From allowed-tools in the SKILL.md frontmatter.

  • Runs code

    Ships script files (R), which the agent can run.

    From the folder's file list and the shell code blocks in SKILL.md.

  • Network

    No URLs in SKILL.md.

    From URLs in SKILL.md, links to its own repository left out.

  • Credentials

    Names no API keys, tokens, secrets or passwords.

    From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.

Context cost

Bio De Results loads about 2.6k tokens when it runs. Until then it costs about 78 tokens; SKILL.md has 484 words of instructions outside code blocks.

Always · name and description, kept in context so the agent knows when to use it
~78
When it runs · the whole SKILL.md, loaded when a task matches
~2.6k

Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.

Safety

Auto-check passed

The automated check found no risky patterns in SKILL.md.

Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.

SKILL.md

Without a licence we can't republish the file, so here is its outline and opening line. It has 484 words (~2,625 tokens).

“Reference examples tested with: DESeq2 1.42+, edgeR 4.0+”

— opening of SKILL.md by FreedomIntelligence
name
bio-de-results
tool_type
r
primary_tool
DESeq2

Read the full SKILL.md on GitHub

Files

SKILL.md and 4 other files in skills/bio-de-results of FreedomIntelligence/OpenClaw-Medical-Skills.

  • SKILL.md
  • examples/annotate_results.R
  • examples/export_excel.R
  • examples/filter_results.R
  • usage-guide.md

Open the folder on GitHubat commit b1f9b6e

Used in 1 other repository

We found 1 copy of this SKILL.md (exact, near-identical or edited) in other folders, from 1 other GitHub owner. This page covers the copy in FreedomIntelligence/OpenClaw-Medical-Skills, which our catalogue first saw on October 9, 2026.

Compare with similar skills

Bio De Results next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.

Bio De Results compared with similar skills
SkillStarsUsed inTokensAuto-checkLicenceRepo updated
Bio De Results this skillFreedomIntelligence/OpenClaw-Medical-Skills3.1k1 repos~2.6kAutomated safety check: PassNone
CSV Data Analysis5zjk5/prompt-engineering127—~2.6kAutomated safety check: PassNone
Category StatisticsMichaelYang-lyx/AIDABench1111 repos~1.2kAutomated safety check: PassNone
Regression Modelerzebbern/claude-code-guide4.7k—~909Automated safety check: PassMIT
Math Reasoninglingzhi227/agent-research-skills390—~639Automated safety check: PassNone
Meta Forest Model Plotaipoch/medical-research-skills1.9k—~2kAutomated safety check: PassMIT

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Questions about Bio De Results

What does Bio De Results do?

Extract, filter, annotate, and export differential expression results from DESeq2 or edgeR. Bio De Results is an agent skill from FreedomIntelligence/OpenClaw-Medical-Skills. Extract, filter, annotate, and export differential expression results from DESeq2 or edgeR.

When should I use Bio De Results?

Bio De Results fits situations like: identifying significant genes; applying multiple testing corrections; adding gene annotations; preparing results for downstream analysis.

How do I install Bio De Results in Claude Code?

Run `npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-de-results -a claude-code`. Or copy the skill folder (skills/bio-de-results in FreedomIntelligence/OpenClaw-Medical-Skills) into .claude/skills/bio-de-results in your project. Claude Code loads it when a task matches its description.

How do I install Bio De Results in Codex?

Run `npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-de-results -a codex`. Or copy the skill folder (skills/bio-de-results in FreedomIntelligence/OpenClaw-Medical-Skills) into .agents/skills/bio-de-results in your project. Codex loads it when a task matches its description.

Can I use Bio De Results in Cursor, Gemini CLI or GitHub Copilot?

Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-de-results -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/bio-de-results, .gemini/skills/bio-de-results, .github/skills/bio-de-results and .opencode/skills/bio-de-results in your project.

What does Bio De Results need to run?

Going by SKILL.md and its folder, Bio De Results needs R for the scripts in its folder.

Does Bio De Results access the network?

SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.

Is Bio De Results safe to install?

Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.

What licence does Bio De Results use?

No licence was found for Bio De Results or its repository. Without one, default copyright applies: ask the author before reusing or redistributing it.

How many tokens does Bio De Results use?

About 2.6k tokens (SKILL.md is roughly 11k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.

What are the alternatives to Bio De Results?

Skills that share tags, products or a category with Bio De Results: CSV Data Analysis (5zjk5/prompt-engineering, 127 stars), Category Statistics (MichaelYang-lyx/AIDABench, 111 stars), Regression Modeler (zebbern/claude-code-guide, 4.7k stars) and Math Reasoning (lingzhi227/agent-research-skills, 390 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.

Who maintains Bio De Results?

FreedomIntelligence (a GitHub organization) maintains it in FreedomIntelligence/OpenClaw-Medical-Skills, which has 3,053 GitHub stars. The repository holds 279 skills in this directory. The repository was last updated on July 21, 2026.

Source: FreedomIntelligence/OpenClaw-Medical-Skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.