Nature-Style Scientific Figures
Yuan1z0825/nature-skills
Creates, revises, audits and exports manuscript-ready scientific figures in Python or R, and routes AI-generated graphical abstracts to a separate workflow.
Agent skill
Bio Clinical Databases Myvariant Queries
by FreedomIntelligence in FreedomIntelligence/OpenClaw-Medical-Skills
Query myvariant.info API for aggregated variant annotations from multiple databases (ClinVar, gnomAD, dbSNP, COSMIC, etc.) in a single request.
Install Bio Clinical Databases Myvariant Queries
$ npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-clinical-databases-myvariant-queries -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install FreedomIntelligence/OpenClaw-Medical-Skills bio-clinical-databases-myvariant-queries --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/bio-clinical-databases-myvariant-queries .claude/skills/bio-clinical-databases-myvariant-queries && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "bio-clinical-databases-myvariant-queries" agent skill from https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/bio-clinical-databases-myvariant-queries into .claude/skills/bio-clinical-databases-myvariant-queries/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "bio-clinical-databases-myvariant-queries", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/bio-clinical-databases-myvariant-queriesType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-clinical-databases-myvariant-queries -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install FreedomIntelligence/OpenClaw-Medical-Skills bio-clinical-databases-myvariant-queries --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills.git skills-src && mkdir -p .agents/skills && cp -r skills-src/skills/bio-clinical-databases-myvariant-queries .agents/skills/bio-clinical-databases-myvariant-queries && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "bio-clinical-databases-myvariant-queries" agent skill from https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/bio-clinical-databases-myvariant-queries into .agents/skills/bio-clinical-databases-myvariant-queries/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "bio-clinical-databases-myvariant-queries", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-clinical-databases-myvariant-queries -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install FreedomIntelligence/OpenClaw-Medical-Skills bio-clinical-databases-myvariant-queries --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/skills/bio-clinical-databases-myvariant-queries .cursor/skills/bio-clinical-databases-myvariant-queries && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "bio-clinical-databases-myvariant-queries" agent skill from https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/bio-clinical-databases-myvariant-queries into .cursor/skills/bio-clinical-databases-myvariant-queries/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "bio-clinical-databases-myvariant-queries", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills.git --path skills/bio-clinical-databases-myvariant-queries--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-clinical-databases-myvariant-queries -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install FreedomIntelligence/OpenClaw-Medical-Skills bio-clinical-databases-myvariant-queries --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/skills/bio-clinical-databases-myvariant-queries .gemini/skills/bio-clinical-databases-myvariant-queries && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "bio-clinical-databases-myvariant-queries" agent skill from https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/bio-clinical-databases-myvariant-queries into .gemini/skills/bio-clinical-databases-myvariant-queries/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "bio-clinical-databases-myvariant-queries", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install FreedomIntelligence/OpenClaw-Medical-Skills bio-clinical-databases-myvariant-queriesInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-clinical-databases-myvariant-queries -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills.git skills-src && mkdir -p .github/skills && cp -r skills-src/skills/bio-clinical-databases-myvariant-queries .github/skills/bio-clinical-databases-myvariant-queries && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "bio-clinical-databases-myvariant-queries" agent skill from https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/bio-clinical-databases-myvariant-queries into .github/skills/bio-clinical-databases-myvariant-queries/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "bio-clinical-databases-myvariant-queries", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-clinical-databases-myvariant-queries -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install FreedomIntelligence/OpenClaw-Medical-Skills bio-clinical-databases-myvariant-queries --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/skills/bio-clinical-databases-myvariant-queries .opencode/skills/bio-clinical-databases-myvariant-queries && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "bio-clinical-databases-myvariant-queries" agent skill from https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/bio-clinical-databases-myvariant-queries into .opencode/skills/bio-clinical-databases-myvariant-queries/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "bio-clinical-databases-myvariant-queries", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
Facts
- Skill name
bio-clinical-databases-myvariant-queries- GitHub stars
- 3.1k
- Token cost
- ~1.3k tokens
- SKILL.md length
- 336 words
- Files
- 3
- Skills in repo
- 279
- Repo updated
- First seen
- Licence
- None found
At a glance
Query myvariant.info API for aggregated variant annotations from multiple databases (ClinVar, gnomAD, dbSNP, COSMIC, etc.) in a single request.
- Annotating variants with clinical and population data from multiple sources simultaneously
- SKILL.md covers Version Compatibility, Required Imports, Initialize Client and Query Single Variant, plus 7 more sections
- Runs Python scripts from its folder; calls pip
What it does
Bio Clinical Databases Myvariant Queries is an agent skill from FreedomIntelligence/OpenClaw-Medical-Skills. Query myvariant.info API for aggregated variant annotations from multiple databases (ClinVar, gnomAD, dbSNP, COSMIC, etc.) in a single request. Use when annotating variants with clinical and population data from multiple sources simultaneously.
Its SKILL.md is about 1.3k tokens, which your agent loads only when the skill is triggered. The skill folder holds 3 other files (for example `examples/query_myvariant.py` and `usage-guide.md`).
It sits in Research & Science. The repository describes itself as: The largest open-source medical AI skills library for OpenClaw🦞.
When your agent uses it
- Annotating variants with clinical and population data from multiple sources simultaneously
Example prompts
- “/bio-clinical-databases-myvariant-queries”
Requirements
- Python 3
What it can do on your machine
Read from SKILL.md and the folder at commit b1f9b6e. It shows what the files ask for, not the result of running them.
Tool permissions
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Runs code
Ships script files (Python), which the agent can run.
Shell commands in SKILL.md call:
pip
From the folder's file list and the shell code blocks in SKILL.md.
Network
No URLs in SKILL.md. Its commands use pip, which can reach the network depending on how they are called.
From URLs in SKILL.md, links to its own repository left out.
Credentials
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Context cost
Bio Clinical Databases Myvariant Queries loads about 1.3k tokens when it runs. Until then it costs about 71 tokens; SKILL.md has 336 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
Safety
Auto-check passed
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
SKILL.md
Without a licence we can't republish the file, so here is its outline and opening line. It has 336 words (~1,301 tokens).
“Reference examples tested with: SnpEff 5.2+, pandas 2.2+”
- name
- bio-clinical-databases-myvariant-queries
- tool_type
- python
- primary_tool
- myvariant
Files
SKILL.md and 2 other files in skills/bio-clinical-databases-myvariant-queries of FreedomIntelligence/OpenClaw-Medical-Skills.
- SKILL.md
- examples/query_myvariant.py
- usage-guide.md
Open the folder on GitHubat commit b1f9b6e
Compare with similar skills
Bio Clinical Databases Myvariant Queries next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Bio Clinical Databases Myvariant Queries this skillFreedomIntelligence/OpenClaw-Medical-Skills | 3.1k | — | ~1.3k | Automated safety check: Pass | None | |
| Nature-Style Scientific FiguresYuan1z0825/nature-skills | 47k | — | ~2.9k | Automated safety check: Pass | Apache-2.0 | |
| Neuropixels Data Analysisdavila7/claude-code-templates | 33k | 9 repos | ~2.8k | Automated safety check: Pass | MIT | |
| High Stakes Analytics Decision Lablimingrui679-design/high-stakes-analytics-decision-lab | 1k | — | ~2.2k | Automated safety check: Pass | MIT | |
| Manuscript Statistics AuditYuan1z0825/nature-skills | 47k | 2 repos | ~2.1k | Automated safety check: Pass | Apache-2.0 | |
| CHARLS Paper Reproduction Guidexjtulyc/MedgeClaw | 617 | 1 repos | ~1.8k | Automated safety check: Pass | None |
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Manuscript Statistics Audit
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Related
Categories
Questions about Bio Clinical Databases Myvariant Queries
What does Bio Clinical Databases Myvariant Queries do?
Query myvariant.info API for aggregated variant annotations from multiple databases (ClinVar, gnomAD, dbSNP, COSMIC, etc.) in a single request. Bio Clinical Databases Myvariant Queries is an agent skill from FreedomIntelligence/OpenClaw-Medical-Skills.) in a single request.
When should I use Bio Clinical Databases Myvariant Queries?
Bio Clinical Databases Myvariant Queries fits situations like: annotating variants with clinical and population data from multiple sources simultaneously.
How do I install Bio Clinical Databases Myvariant Queries in Claude Code?
Run `npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-clinical-databases-myvariant-queries -a claude-code`. Or copy the skill folder (skills/bio-clinical-databases-myvariant-queries in FreedomIntelligence/OpenClaw-Medical-Skills) into .claude/skills/bio-clinical-databases-myvariant-queries in your project. Claude Code loads it when a task matches its description.
How do I install Bio Clinical Databases Myvariant Queries in Codex?
Run `npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-clinical-databases-myvariant-queries -a codex`. Or copy the skill folder (skills/bio-clinical-databases-myvariant-queries in FreedomIntelligence/OpenClaw-Medical-Skills) into .agents/skills/bio-clinical-databases-myvariant-queries in your project. Codex loads it when a task matches its description.
Can I use Bio Clinical Databases Myvariant Queries in Cursor, Gemini CLI or GitHub Copilot?
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add FreedomIntelligence/OpenClaw-Medical-Skills --skill bio-clinical-databases-myvariant-queries -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/bio-clinical-databases-myvariant-queries, .gemini/skills/bio-clinical-databases-myvariant-queries, .github/skills/bio-clinical-databases-myvariant-queries and .opencode/skills/bio-clinical-databases-myvariant-queries in your project.
What does Bio Clinical Databases Myvariant Queries need to run?
Going by SKILL.md and its folder, Bio Clinical Databases Myvariant Queries needs Python for the scripts in its folder and the command-line tools its instructions call (pip). Our summary lists: Python 3.
Does Bio Clinical Databases Myvariant Queries access the network?
SKILL.md contains no URLs. Its commands use pip, which can reach the network depending on how they are called. This is read from the text; nothing was executed.
Is Bio Clinical Databases Myvariant Queries safe to install?
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
What licence does Bio Clinical Databases Myvariant Queries use?
No licence was found for Bio Clinical Databases Myvariant Queries or its repository. Without one, default copyright applies: ask the author before reusing or redistributing it.
How many tokens does Bio Clinical Databases Myvariant Queries use?
About 1.3k tokens (SKILL.md is roughly 5.2k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
What are the alternatives to Bio Clinical Databases Myvariant Queries?
Skills that share tags, products or a category with Bio Clinical Databases Myvariant Queries: Nature-Style Scientific Figures (Yuan1z0825/nature-skills, 47k stars), Neuropixels Data Analysis (davila7/claude-code-templates, 33k stars), High Stakes Analytics Decision Lab (limingrui679-design/high-stakes-analytics-decision-lab, 1k stars) and Manuscript Statistics Audit (Yuan1z0825/nature-skills, 47k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
Who maintains Bio Clinical Databases Myvariant Queries?
FreedomIntelligence (a GitHub organization) maintains it in FreedomIntelligence/OpenClaw-Medical-Skills, which has 3,053 GitHub stars. The repository holds 279 skills in this directory. The repository was last updated on July 21, 2026.
Source: FreedomIntelligence/OpenClaw-Medical-Skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.