Agent skill

Healthcare Emr Patterns

EMR/EHR development patterns for healthcare applications. An agent skill from affaan-m/ECC.

Install Healthcare Emr Patterns

skills CLI

$ npx skills add affaan-m/ECC --skill healthcare-emr-patterns -a claude-code

Project install by default; add -g for ~/.claude/skills/.

GitHub CLI

$ gh skill install affaan-m/ECC healthcare-emr-patterns --agent claude-code

Project scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).

Manual copy

$ git clone --depth 1 https://github.com/affaan-m/ECC.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/healthcare-emr-patterns .claude/skills/healthcare-emr-patterns && rm -rf skills-src

Use ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.

Claude Code skills documentation · loads skills from .claude/skills/

Paste into Claude Code

Install the "healthcare-emr-patterns" agent skill from https://github.com/affaan-m/ECC/tree/main/skills/healthcare-emr-patterns into .claude/skills/healthcare-emr-patterns/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "healthcare-emr-patterns", then confirm the skill loads.

Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.

$skill-installer

$skill-installer install https://github.com/affaan-m/ECC/tree/main/skills/healthcare-emr-patterns

Type this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.

skills CLI

$ npx skills add affaan-m/ECC --skill healthcare-emr-patterns -a codex

Project install goes to .agents/skills/; add -g for ~/.codex/skills/.

GitHub CLI

$ gh skill install affaan-m/ECC healthcare-emr-patterns --agent codex

Project scope by default (.agents/skills/); add --scope user for a personal install.

Manual copy

$ git clone --depth 1 https://github.com/affaan-m/ECC.git skills-src && mkdir -p .agents/skills && cp -r skills-src/skills/healthcare-emr-patterns .agents/skills/healthcare-emr-patterns && rm -rf skills-src

Use ~/.agents/skills/ instead of .agents/skills for a personal install.

Codex skills documentation · loads skills from .agents/skills/

Paste into Codex

Install the "healthcare-emr-patterns" agent skill from https://github.com/affaan-m/ECC/tree/main/skills/healthcare-emr-patterns into .agents/skills/healthcare-emr-patterns/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "healthcare-emr-patterns", then confirm the skill loads.

Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.

skills CLI

$ npx skills add affaan-m/ECC --skill healthcare-emr-patterns -a cursor

Project install goes to .agents/skills/; add -g for ~/.cursor/skills/.

GitHub CLI

$ gh skill install affaan-m/ECC healthcare-emr-patterns --agent cursor

Project scope by default (.agents/skills/); add --scope user for a personal install.

Manual copy

$ git clone --depth 1 https://github.com/affaan-m/ECC.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/skills/healthcare-emr-patterns .cursor/skills/healthcare-emr-patterns && rm -rf skills-src

Use ~/.cursor/skills/ instead of .cursor/skills for a personal install.

Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/

Paste into Cursor

Install the "healthcare-emr-patterns" agent skill from https://github.com/affaan-m/ECC/tree/main/skills/healthcare-emr-patterns into .cursor/skills/healthcare-emr-patterns/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "healthcare-emr-patterns", then confirm the skill loads.

Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.

gemini skills install

$ gemini skills install https://github.com/affaan-m/ECC.git --path skills/healthcare-emr-patterns

--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.

skills CLI

$ npx skills add affaan-m/ECC --skill healthcare-emr-patterns -a gemini-cli

Project install goes to .agents/skills/; add -g for ~/.gemini/skills/.

GitHub CLI

$ gh skill install affaan-m/ECC healthcare-emr-patterns --agent gemini-cli

Project scope by default (.agents/skills/); add --scope user for a personal install.

Manual copy

$ git clone --depth 1 https://github.com/affaan-m/ECC.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/skills/healthcare-emr-patterns .gemini/skills/healthcare-emr-patterns && rm -rf skills-src

Use ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.

Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/

Paste into Gemini CLI

Install the "healthcare-emr-patterns" agent skill from https://github.com/affaan-m/ECC/tree/main/skills/healthcare-emr-patterns into .gemini/skills/healthcare-emr-patterns/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "healthcare-emr-patterns", then confirm the skill loads.

Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.

GitHub CLI

$ gh skill install affaan-m/ECC healthcare-emr-patterns

Installs for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).

skills CLI

$ npx skills add affaan-m/ECC --skill healthcare-emr-patterns -a github-copilot

Project install goes to .agents/skills/; add -g for ~/.copilot/skills/.

Manual copy

$ git clone --depth 1 https://github.com/affaan-m/ECC.git skills-src && mkdir -p .github/skills && cp -r skills-src/skills/healthcare-emr-patterns .github/skills/healthcare-emr-patterns && rm -rf skills-src

Use ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.

GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/

Paste into GitHub Copilot

Install the "healthcare-emr-patterns" agent skill from https://github.com/affaan-m/ECC/tree/main/skills/healthcare-emr-patterns into .github/skills/healthcare-emr-patterns/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "healthcare-emr-patterns", then confirm the skill loads.

GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.

skills CLI

$ npx skills add affaan-m/ECC --skill healthcare-emr-patterns -a opencode

OpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.

GitHub CLI

$ gh skill install affaan-m/ECC healthcare-emr-patterns --agent opencode

Project scope by default (.agents/skills/); add --scope user for a personal install.

Manual copy

$ git clone --depth 1 https://github.com/affaan-m/ECC.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/skills/healthcare-emr-patterns .opencode/skills/healthcare-emr-patterns && rm -rf skills-src

Use ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.

OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/

Paste into OpenCode

Install the "healthcare-emr-patterns" agent skill from https://github.com/affaan-m/ECC/tree/main/skills/healthcare-emr-patterns into .opencode/skills/healthcare-emr-patterns/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "healthcare-emr-patterns", then confirm the skill loads.

OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.

Facts

Skill name: healthcare-emr-patterns
GitHub stars: 277k
Used in: 1 other repo
Token cost: ~1.6k tokens
SKILL.md length: 417 words
Files: 1
Skills in repo: 683
Repo updated: Oct 11, 2026
First seen: Oct 7, 2026
Licence: MIT

At a glance

EMR/EHR development patterns for healthcare applications. An agent skill from affaan-m/ECC.

EHR features such as encounter workflows
SKILL.md covers When to Use, How It Works and Examples
Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md
Prescription generation

What it does

Healthcare Emr Patterns is an agent skill from affaan-m/ECC. EMR/EHR development patterns for healthcare applications. Clinical safety, encounter workflows, prescription generation, clinical decision support integration, and accessibility-first UI for medical data entry. Use when building EMR or EHR features such as encounter workflows, prescription generation, or clinical data entry UI.

Its SKILL.md is about 1.6k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.

It sits in Research & Science, covering Clinical and healthcare research. The repository describes itself as: The agent harness performance optimization system. Skills, instincts, memory, security, and research-first development for Claude Code, Codex, Opencode, Cursor and beyond. The licence is MIT.

When your agent uses it

EHR features such as encounter workflows
Prescription generation
Clinical data entry UI

Example prompts

“/healthcare-emr-patterns”

What it can do on your machine

Read from SKILL.md and the folder at commit 2d515e4. It shows what the files ask for, not the result of running them.

Tool permissions
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Runs code
No scripts in the folder and no shell commands in SKILL.md (its code samples are typescript).
From the folder's file list and the shell code blocks in SKILL.md.
Network
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Credentials
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.

Context cost

Healthcare Emr Patterns loads about 1.6k tokens when it runs. Until then it costs about 88 tokens; SKILL.md has 417 words of instructions outside code blocks.

Always · name and description, kept in context so the agent knows when to use it: ~88
When it runs · the whole SKILL.md, loaded when a task matches: ~1.6k

Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.

Safety

Auto-check passed

The automated check found no risky patterns in SKILL.md.

Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.

SKILL.md

The full file from affaan-m/ECC at commit 2d515e4, republished under its MIT licence (© affaan-m). 417 words, ~1,648 tokens.

Download SKILL.mdSave it as .claude/skills/healthcare-emr-patterns/SKILL.md (or your agent's skills folder).

name: healthcare-emr-patterns
description: EMR/EHR development patterns for healthcare applications. Clinical safety, encounter workflows, prescription generation, clinical decision support integration, and accessibility-first UI for medical data entry. Use when building EMR or EHR features such as encounter workflows, prescription generation, or clinical data entry UI.
metadata.version: 1.0.0
metadata.origin: Health1 Super Speciality Hospitals — contributed by Dr. Keyur Patel

Healthcare EMR Development Patterns

Patterns for building Electronic Medical Record (EMR) and Electronic Health Record (EHR) systems. Prioritizes patient safety, clinical accuracy, and practitioner efficiency.

When to Use

Building patient encounter workflows (complaint, exam, diagnosis, prescription)
Implementing clinical note-taking (structured + free text + voice-to-text)
Designing prescription/medication modules with drug interaction checking
Integrating Clinical Decision Support Systems (CDSS)
Building lab result displays with reference range highlighting
Implementing audit trails for clinical data
Designing healthcare-accessible UIs for clinical data entry

How It Works

Patient Safety First

Every design decision must be evaluated against: "Could this harm a patient?"

Drug interactions MUST alert, not silently pass
Abnormal lab values MUST be visually flagged
Critical vitals MUST trigger escalation workflows
No clinical data modification without audit trail

Single-Page Encounter Flow

Clinical encounters should flow vertically on a single page — no tab switching:

Patient Header (sticky — always visible)
├── Demographics, allergies, active medications
│
Encounter Flow (vertical scroll)
├── 1. Chief Complaint (structured templates + free text)
├── 2. History of Present Illness
├── 3. Physical Examination (system-wise)
├── 4. Vitals (auto-trigger clinical scoring)
├── 5. Diagnosis (ICD-10/SNOMED search)
├── 6. Medications (drug DB + interaction check)
├── 7. Investigations (lab/radiology orders)
├── 8. Plan & Follow-up
└── 9. Sign / Lock / Print

Smart Template System

typescript

interface ClinicalTemplate {
  id: string;
  name: string;             // e.g., "Chest Pain"
  chips: string[];          // clickable symptom chips
  requiredFields: string[]; // mandatory data points
  redFlags: string[];       // triggers non-dismissable alert
  icdSuggestions: string[]; // pre-mapped diagnosis codes
}

Red flags in any template must trigger a visible, non-dismissable alert — NOT a toast notification.

Medication Safety Pattern

User selects drug
  → Check current medications for interactions
  → Check encounter medications for interactions
  → Check patient allergies
  → Validate dose against weight/age/renal function
  → If CRITICAL interaction: BLOCK prescribing entirely
  → Clinician must document override reason to proceed past a block
  → If MAJOR interaction: display warning, require acknowledgment
  → Log all alerts and override reasons in audit trail

Critical interactions block prescribing by default. The clinician must explicitly override with a documented reason stored in the audit trail. The system never silently allows a critical interaction.

Locked Encounter Pattern

Once a clinical encounter is signed:

No edits allowed — only an addendum (a separate linked record)
Both original and addendum appear in the patient timeline
Audit trail captures who signed, when, and any addendum records

Show full SKILL.md (193 more words)Show less

UI Patterns for Clinical Data

Vitals Display: Current values with normal range highlighting (green/yellow/red), trend arrows vs previous, clinical scoring auto-calculated (NEWS2, qSOFA), escalation guidance inline.

Lab Results Display: Normal range highlighting, previous value comparison, critical values with non-dismissable alert, collection/analysis timestamps, pending orders with expected turnaround.

Prescription PDF: One-click generation with patient demographics, allergies, diagnosis, drug details (generic + brand, dose, route, frequency, duration), clinician signature block.

Accessibility for Healthcare

Healthcare UIs have stricter requirements than typical web apps:

4.5:1 minimum contrast (WCAG AA) — clinicians work in varied lighting
Large touch targets (44x44px minimum) — for gloved/rushed interaction
Keyboard navigation — for power users entering data rapidly
No color-only indicators — always pair color with text/icon (colorblind clinicians)
Screen reader labels on all form fields
No auto-dismissing toasts for clinical alerts — clinician must actively acknowledge

Anti-Patterns

Storing clinical data in browser localStorage
Silent failures in drug interaction checking
Dismissable toasts for critical clinical alerts
Tab-based encounter UIs that fragment the clinical workflow
Allowing edits to signed/locked encounters
Displaying clinical data without audit trail
Using any type for clinical data structures

Examples

Example 1: Patient Encounter Flow

Doctor opens encounter for Patient #4521
  → Sticky header shows: "Rajesh M, 58M, Allergies: Penicillin, Active Meds: Metformin 500mg"
  → Chief Complaint: selects "Chest Pain" template
    → Clicks chips: "substernal", "radiating to left arm", "crushing"
    → Red flag "crushing substernal chest pain" triggers non-dismissable alert
  → Examination: CVS system — "S1 S2 normal, no murmur"
  → Vitals: HR 110, BP 90/60, SpO2 94%
    → NEWS2 auto-calculates: score 8, risk HIGH, escalation alert shown
  → Diagnosis: searches "ACS" → selects ICD-10 I21.9
  → Medications: selects Aspirin 300mg
    → CDSS checks against Metformin: no interaction
  → Signs encounter → locked, addendum-only from this point

Example 2: Medication Safety Workflow

Doctor prescribes Warfarin for Patient #4521
  → CDSS detects: Warfarin + Aspirin = CRITICAL interaction
  → UI: red non-dismissable modal blocks prescribing
  → Doctor clicks "Override with reason"
  → Types: "Benefits outweigh risks — monitored INR protocol"
  → Override reason + alert stored in audit trail
  → Prescription proceeds with documented override

Example 3: Locked Encounter + Addendum

Encounter #E-2024-0891 signed by Dr. Shah at 14:30
  → All fields locked — no edit buttons visible
  → "Add Addendum" button available
  → Dr. Shah clicks addendum, adds: "Lab results received — Troponin elevated"
  → New record E-2024-0891-A1 linked to original
  → Timeline shows both: original encounter + addendum with timestamps

Files

Just SKILL.md in skills/healthcare-emr-patterns of affaan-m/ECC.

Open the folder on GitHubat commit 2d515e4

Used in 1 other repository

We found 2 copies of this SKILL.md (exact, near-identical or edited) in other folders, from 1 other GitHub owner. This page covers the copy in affaan-m/ECC, which our catalogue first saw on October 7, 2026.

templetongroup/radiantskills/healthcare-emr-patterns

Compare with similar skills

Healthcare Emr Patterns next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.

Healthcare Emr Patterns compared with similar skills
Skill	Stars	Used in	Tokens	Auto-check	Licence	Repo updated
Healthcare Emr Patterns this skillaffaan-m/ECC	277k	1 repos	~1.6k	Automated safety check: Pass	MIT	today
Clinical Trials Databasegoogle-deepmind/science-skills	3.2k	2 repos	~3.2k	Automated safety check: Pass	Apache-2.0	yesterday
CHARLS Paper Reproduction Guidexjtulyc/MedgeClaw	617	1 repos	~1.8k	Automated safety check: Pass	None	7 mo ago
Biomedical Analysis Dispatchxjtulyc/MedgeClaw	617	1 repos	~2k	Automated safety check: Pass	None	7 mo ago
Research Paperluwill/research-skills	862	—	~1.9k	Automated safety check: Pass	None	yesterday
Research Proposalluwill/research-skills	862	—	~4.5k	Automated safety check: Notes	None	yesterday

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Questions about Healthcare Emr Patterns

What does Healthcare Emr Patterns do?

EMR/EHR development patterns for healthcare applications. An agent skill from affaan-m/ECC. Healthcare Emr Patterns is an agent skill from affaan-m/ECC. EMR/EHR development patterns for healthcare applications.

When should I use Healthcare Emr Patterns?

Healthcare Emr Patterns fits situations like: EHR features such as encounter workflows; prescription generation; clinical data entry UI.

How do I install Healthcare Emr Patterns in Claude Code?

Run `npx skills add affaan-m/ECC --skill healthcare-emr-patterns -a claude-code`. Or copy the skill folder (skills/healthcare-emr-patterns in affaan-m/ECC) into .claude/skills/healthcare-emr-patterns in your project. Claude Code loads it when a task matches its description.

How do I install Healthcare Emr Patterns in Codex?

Run `npx skills add affaan-m/ECC --skill healthcare-emr-patterns -a codex`. Or copy the skill folder (skills/healthcare-emr-patterns in affaan-m/ECC) into .agents/skills/healthcare-emr-patterns in your project. Codex loads it when a task matches its description.

Can I use Healthcare Emr Patterns in Cursor, Gemini CLI or GitHub Copilot?

Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add affaan-m/ECC --skill healthcare-emr-patterns -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/healthcare-emr-patterns, .gemini/skills/healthcare-emr-patterns, .github/skills/healthcare-emr-patterns and .opencode/skills/healthcare-emr-patterns in your project.

What does Healthcare Emr Patterns need to run?

SKILL.md names no scripts, command-line tools or credentials: Healthcare Emr Patterns is instructions for the agent only.

Does Healthcare Emr Patterns access the network?

SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.

Is Healthcare Emr Patterns safe to install?

Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.

What licence does Healthcare Emr Patterns use?

Healthcare Emr Patterns is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.

How many tokens does Healthcare Emr Patterns use?

About 1.6k tokens (SKILL.md is roughly 6.6k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.

What are the alternatives to Healthcare Emr Patterns?

Skills that share tags, products or a category with Healthcare Emr Patterns: Clinical Trials Database (google-deepmind/science-skills, 3.2k stars), CHARLS Paper Reproduction Guide (xjtulyc/MedgeClaw, 617 stars), Biomedical Analysis Dispatch (xjtulyc/MedgeClaw, 617 stars) and Research Paper (luwill/research-skills, 862 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.

Who maintains Healthcare Emr Patterns?

affaan-m (a GitHub user) maintains it in affaan-m/ECC, which has 276,673 GitHub stars. The repository holds 683 skills in this directory. The repository was last updated on October 11, 2026.

Source: affaan-m/ECC on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.

Install Healthcare Emr Patterns

Facts

At a glance

What it does

When your agent uses it

Example prompts

What it can do on your machine

Tool permissions

Runs code

Network

Credentials

Context cost

Safety

SKILL.md

Healthcare EMR Development Patterns

When to Use

How It Works

Patient Safety First

Single-Page Encounter Flow

Smart Template System

Medication Safety Pattern

Locked Encounter Pattern

UI Patterns for Clinical Data

Accessibility for Healthcare

Anti-Patterns

Examples

Example 1: Patient Encounter Flow

Example 2: Medication Safety Workflow

Example 3: Locked Encounter + Addendum

Files

Used in 1 other repository

Compare with similar skills

Similar skills

More from affaan-m/ECC

Related

Questions about Healthcare Emr Patterns