Clinical Trials Database
google-deepmind/science-skills
Query ClinicalTrials.gov via APIv2. An agent skill from google-deepmind/science-skills.
Clinical Decision Support System (CDSS) development patterns.
$ npx skills add affaan-m/ECC --skill healthcare-cdss-patterns -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install affaan-m/ECC healthcare-cdss-patterns --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/affaan-m/ECC.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/healthcare-cdss-patterns .claude/skills/healthcare-cdss-patterns && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "healthcare-cdss-patterns" agent skill from https://github.com/affaan-m/ECC/tree/main/skills/healthcare-cdss-patterns into .claude/skills/healthcare-cdss-patterns/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "healthcare-cdss-patterns", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/affaan-m/ECC/tree/main/skills/healthcare-cdss-patternsType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add affaan-m/ECC --skill healthcare-cdss-patterns -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install affaan-m/ECC healthcare-cdss-patterns --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/affaan-m/ECC.git skills-src && mkdir -p .agents/skills && cp -r skills-src/skills/healthcare-cdss-patterns .agents/skills/healthcare-cdss-patterns && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "healthcare-cdss-patterns" agent skill from https://github.com/affaan-m/ECC/tree/main/skills/healthcare-cdss-patterns into .agents/skills/healthcare-cdss-patterns/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "healthcare-cdss-patterns", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add affaan-m/ECC --skill healthcare-cdss-patterns -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install affaan-m/ECC healthcare-cdss-patterns --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/affaan-m/ECC.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/skills/healthcare-cdss-patterns .cursor/skills/healthcare-cdss-patterns && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "healthcare-cdss-patterns" agent skill from https://github.com/affaan-m/ECC/tree/main/skills/healthcare-cdss-patterns into .cursor/skills/healthcare-cdss-patterns/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "healthcare-cdss-patterns", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/affaan-m/ECC.git --path skills/healthcare-cdss-patterns--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add affaan-m/ECC --skill healthcare-cdss-patterns -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install affaan-m/ECC healthcare-cdss-patterns --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/affaan-m/ECC.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/skills/healthcare-cdss-patterns .gemini/skills/healthcare-cdss-patterns && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "healthcare-cdss-patterns" agent skill from https://github.com/affaan-m/ECC/tree/main/skills/healthcare-cdss-patterns into .gemini/skills/healthcare-cdss-patterns/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "healthcare-cdss-patterns", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install affaan-m/ECC healthcare-cdss-patternsInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add affaan-m/ECC --skill healthcare-cdss-patterns -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/affaan-m/ECC.git skills-src && mkdir -p .github/skills && cp -r skills-src/skills/healthcare-cdss-patterns .github/skills/healthcare-cdss-patterns && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "healthcare-cdss-patterns" agent skill from https://github.com/affaan-m/ECC/tree/main/skills/healthcare-cdss-patterns into .github/skills/healthcare-cdss-patterns/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "healthcare-cdss-patterns", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add affaan-m/ECC --skill healthcare-cdss-patterns -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install affaan-m/ECC healthcare-cdss-patterns --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/affaan-m/ECC.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/skills/healthcare-cdss-patterns .opencode/skills/healthcare-cdss-patterns && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "healthcare-cdss-patterns" agent skill from https://github.com/affaan-m/ECC/tree/main/skills/healthcare-cdss-patterns into .opencode/skills/healthcare-cdss-patterns/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "healthcare-cdss-patterns", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
healthcare-cdss-patternsClinical Decision Support System (CDSS) development patterns.
Healthcare Cdss Patterns is an agent skill from affaan-m/ECC. Clinical Decision Support System (CDSS) development patterns. Drug interaction checking, dose validation, clinical scoring (NEWS2, qSOFA), alert severity classification, and integration into EMR workflows. Use when building clinical decision support — drug interaction checks, dose validation, clinical scoring, or alert severity.
Its SKILL.md is about 2.4k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
It sits in Research & Science, covering Clinical and healthcare research. The repository describes itself as: The agent harness performance optimization system. Skills, instincts, memory, security, and research-first development for Claude Code, Codex, Opencode, Cursor and beyond. The licence is MIT.
3 steps, taken from the first numbered list in SKILL.md.
Read from SKILL.md and the folder at commit 2d515e4. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
No scripts in the folder and no shell commands in SKILL.md (its code samples are typescript).
From the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Healthcare Cdss Patterns loads about 2.4k tokens when it runs. Until then it costs about 89 tokens; SKILL.md has 343 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
The full file from affaan-m/ECC at commit 2d515e4, republished under its MIT licence (© affaan-m). 343 words, ~2,355 tokens.
.claude/skills/healthcare-cdss-patterns/SKILL.md (or your agent's skills folder).Patterns for building Clinical Decision Support Systems that integrate into EMR workflows. CDSS modules are patient safety critical — zero tolerance for false negatives.
The CDSS engine is a pure function library with zero side effects. Input clinical data, output alerts. This makes it fully testable.
Three primary modules:
checkInteractions(newDrug, currentMeds, allergies) — Checks a new drug against current medications and known allergies. Returns severity-sorted InteractionAlert[]. Uses DrugInteractionPair data model.validateDose(drug, dose, route, weight, age, renalFunction) — Validates a prescribed dose against weight-based, age-adjusted, and renal-adjusted rules. Returns DoseValidationResult.calculateNEWS2(vitals) — National Early Warning Score 2 from NEWS2Input. Returns NEWS2Result with total score, risk level, and escalation guidance.EMR UI
↓ (user enters data)
CDSS Engine (pure functions, no side effects)
├── Drug Interaction Checker
├── Dose Validator
├── Clinical Scoring (NEWS2, qSOFA, etc.)
└── Alert Classifier
↓ (returns alerts)
EMR UI (displays alerts inline, blocks if critical)interface DrugInteractionPair {
drugA: string; // generic name
drugB: string; // generic name
severity: 'critical' | 'major' | 'minor';
mechanism: string;
clinicalEffect: string;
recommendation: string;
}
function checkInteractions(
newDrug: string,
currentMedications: string[],
allergyList: string[]
): InteractionAlert[] {
if (!newDrug) return [];
const alerts: InteractionAlert[] = [];
for (const current of currentMedications) {
const interaction = findInteraction(newDrug, current);
if (interaction) {
alerts.push({ severity: interaction.severity, pair: [newDrug, current],
message: interaction.clinicalEffect, recommendation: interaction.recommendation });
}
}
for (const allergy of allergyList) {
if (isCrossReactive(newDrug, allergy)) {
alerts.push({ severity: 'critical', pair: [newDrug, allergy],
message: `Cross-reactivity with documented allergy: ${allergy}`,
recommendation: 'Do not prescribe without allergy consultation' });
}
}
return alerts.sort((a, b) => severityOrder(a.severity) - severityOrder(b.severity));
}Interaction pairs must be bidirectional: if Drug A interacts with Drug B, then Drug B interacts with Drug A.
interface DoseValidationResult {
valid: boolean;
message: string;
suggestedRange: { min: number; max: number; unit: string } | null;
factors: string[];
}
function validateDose(
drug: string,
dose: number,
route: 'oral' | 'iv' | 'im' | 'sc' | 'topical',
patientWeight?: number,
patientAge?: number,
renalFunction?: number
): DoseValidationResult {
const rules = getDoseRules(drug, route);
if (!rules) return { valid: true, message: 'No validation rules available', suggestedRange: null, factors: [] };
const factors: string[] = [];
// SAFETY: if rules require weight but weight missing, BLOCK (not pass)
if (rules.weightBased) {
if (!patientWeight || patientWeight <= 0) {
return { valid: false, message: `Weight required for ${drug} (mg/kg drug)`,
suggestedRange: null, factors: ['weight_missing'] };
}
factors.push('weight');
const maxDose = rules.maxPerKg * patientWeight;
if (dose > maxDose) {
return { valid: false, message: `Dose exceeds max for ${patientWeight}kg`,
suggestedRange: { min: rules.minPerKg * patientWeight, max: maxDose, unit: rules.unit }, factors };
}
}
// Age-based adjustment (when rules define age brackets and age is provided)
if (rules.ageAdjusted && patientAge !== undefined) {
factors.push('age');
const ageMax = rules.getAgeAdjustedMax(patientAge);
if (dose > ageMax) {
return { valid: false, message: `Exceeds age-adjusted max for ${patientAge}yr`,
suggestedRange: { min: rules.typicalMin, max: ageMax, unit: rules.unit }, factors };
}
}
// Renal adjustment (when rules define eGFR brackets and eGFR is provided)
if (rules.renalAdjusted && renalFunction !== undefined) {
factors.push('renal');
const renalMax = rules.getRenalAdjustedMax(renalFunction);
if (dose > renalMax) {
return { valid: false, message: `Exceeds renal-adjusted max for eGFR ${renalFunction}`,
suggestedRange: { min: rules.typicalMin, max: renalMax, unit: rules.unit }, factors };
}
}
// Absolute max
if (dose > rules.absoluteMax) {
return { valid: false, message: `Exceeds absolute max ${rules.absoluteMax}${rules.unit}`,
suggestedRange: { min: rules.typicalMin, max: rules.absoluteMax, unit: rules.unit },
factors: [...factors, 'absolute_max'] };
}
return { valid: true, message: 'Within range',
suggestedRange: { min: rules.typicalMin, max: rules.typicalMax, unit: rules.unit }, factors };
}interface NEWS2Input {
respiratoryRate: number; oxygenSaturation: number; supplementalOxygen: boolean;
temperature: number; systolicBP: number; heartRate: number;
consciousness: 'alert' | 'voice' | 'pain' | 'unresponsive';
}
interface NEWS2Result {
total: number; // 0-20
risk: 'low' | 'low-medium' | 'medium' | 'high';
components: Record<string, number>;
escalation: string;
}Scoring tables must match the Royal College of Physicians specification exactly.
| Severity | UI Behavior | Clinician Action Required |
|---|---|---|
| Critical | Block action. Non-dismissable modal. Red. | Must document override reason to proceed |
| Major | Warning banner inline. Orange. | Must acknowledge before proceeding |
| Minor | Info note inline. Yellow. | Awareness only, no action required |
Critical alerts must NEVER be auto-dismissed or implemented as toast notifications. Override reasons must be stored in the audit trail.
describe('CDSS — Patient Safety', () => {
INTERACTION_PAIRS.forEach(({ drugA, drugB, severity }) => {
it(`detects ${drugA} + ${drugB} (${severity})`, () => {
const alerts = checkInteractions(drugA, [drugB], []);
expect(alerts.length).toBeGreaterThan(0);
expect(alerts[0].severity).toBe(severity);
});
it(`detects ${drugB} + ${drugA} (reverse)`, () => {
const alerts = checkInteractions(drugB, [drugA], []);
expect(alerts.length).toBeGreaterThan(0);
});
});
it('blocks mg/kg drug when weight is missing', () => {
const result = validateDose('gentamicin', 300, 'iv');
expect(result.valid).toBe(false);
expect(result.factors).toContain('weight_missing');
});
it('handles malformed drug data gracefully', () => {
expect(() => checkInteractions('', [], [])).not.toThrow();
});
});Pass criteria: 100%. A single missed interaction is a patient safety event.
any types for drug or clinical dataconst alerts = checkInteractions('warfarin', ['aspirin', 'metformin'], ['penicillin']);
// [{ severity: 'critical', pair: ['warfarin', 'aspirin'],
// message: 'Increased bleeding risk', recommendation: 'Avoid combination' }]const ok = validateDose('paracetamol', 1000, 'oral', 70, 45);
// { valid: true, suggestedRange: { min: 500, max: 4000, unit: 'mg' } }
const bad = validateDose('paracetamol', 5000, 'oral', 70, 45);
// { valid: false, message: 'Exceeds absolute max 4000mg' }
const noWeight = validateDose('gentamicin', 300, 'iv');
// { valid: false, factors: ['weight_missing'] }const result = calculateNEWS2({
respiratoryRate: 24, oxygenSaturation: 93, supplementalOxygen: true,
temperature: 38.5, systolicBP: 100, heartRate: 110, consciousness: 'voice'
});
// { total: 13, risk: 'high', escalation: 'Urgent clinical review. Consider ICU.' }© affaan-m, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
Just SKILL.md in skills/healthcare-cdss-patterns of affaan-m/ECC.
Open the folder on GitHubat commit 2d515e4
We found 2 copies of this SKILL.md (exact, near-identical or edited) in other folders, from 1 other GitHub owner. This page covers the copy in affaan-m/ECC, which our catalogue first saw on October 7, 2026.
Healthcare Cdss Patterns next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Healthcare Cdss Patterns this skillaffaan-m/ECC | 277k | 1 repos | ~2.4k | Automated safety check: Pass | MIT | |
| Clinical Trials Databasegoogle-deepmind/science-skills | 3.2k | 2 repos | ~3.2k | Automated safety check: Pass | Apache-2.0 | |
| CHARLS Paper Reproduction Guidexjtulyc/MedgeClaw | 617 | 1 repos | ~1.8k | Automated safety check: Pass | None | |
| Biomedical Analysis Dispatchxjtulyc/MedgeClaw | 617 | 1 repos | ~2k | Automated safety check: Pass | None | |
| Research Paperluwill/research-skills | 862 | — | ~1.9k | Automated safety check: Pass | None | |
| Research Proposalluwill/research-skills | 862 | — | ~4.5k | Automated safety check: Notes | None |
google-deepmind/science-skills
Query ClinicalTrials.gov via APIv2. An agent skill from google-deepmind/science-skills.
xjtulyc/MedgeClaw
Guides an agent through reproducing papers built on the CHARLS health and retirement survey, from variable mapping to cognition, depression and isolation scores.
xjtulyc/MedgeClaw
Routes bioinformatics, drug discovery, clinical and multi-omics tasks from a chat interface to Claude Code sessions running K-Dense scientific skills, with a live dashboard per task.
luwill/research-skills
A skill your agent uses when the user asks to write or draft an ORIGINAL RESEARCH ARTICLE — IMRaD paper, conference paper, short/workshop paper, 研究论文/期刊论文/会议论文 — reporting their own completed…
luwill/research-skills
A skill your agent uses when the user asks to write or draft a PhD / doctoral research proposal, research plan, 研究计划书, or 开题报告 — a forward-looking plan of background, gap, research questions…
LeonChaoX/qinyan-academic-skills
Write comprehensive literature reviews for medical imaging AI research.
affaan-m/ECC
Audits your installed Claude skills and commands for quality, with a quick mode for recently changed skills and a full mode that evaluates all of them through subagents.
affaan-m/ECC
Ingests, indexes, searches, edits and monitors video, audio and live streams through the VideoDB Python SDK, returning stream links, clips and timestamps.
affaan-m/ECC
Route broad documentation-governance requests to existing ECC skills and run an opt-in, read-only audit of mapped documentation roles, links, ADR indexes, and evidence references.
affaan-m/ECC
Scans installed skills for principles that recur across them and proposes rule-file changes: append, revise, add a section, create a file or leave as covered.
affaan-m/ECC
Builds DRAFT counterparty agreements from one markdown template and a small JSON spec per party, with clauses picked by the party's role.
affaan-m/ECC
Set an ECC-specific frontend design direction for production UI work.
Categories
Clinical Decision Support System (CDSS) development patterns. Healthcare Cdss Patterns is an agent skill from affaan-m/ECC. Clinical Decision Support System (CDSS) development patterns.
Healthcare Cdss Patterns fits situations like: building clinical decision support — drug interaction checks; dose validation; clinical scoring.
Run `npx skills add affaan-m/ECC --skill healthcare-cdss-patterns -a claude-code`. Or copy the skill folder (skills/healthcare-cdss-patterns in affaan-m/ECC) into .claude/skills/healthcare-cdss-patterns in your project. Claude Code loads it when a task matches its description.
Run `npx skills add affaan-m/ECC --skill healthcare-cdss-patterns -a codex`. Or copy the skill folder (skills/healthcare-cdss-patterns in affaan-m/ECC) into .agents/skills/healthcare-cdss-patterns in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add affaan-m/ECC --skill healthcare-cdss-patterns -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/healthcare-cdss-patterns, .gemini/skills/healthcare-cdss-patterns, .github/skills/healthcare-cdss-patterns and .opencode/skills/healthcare-cdss-patterns in your project.
SKILL.md names no scripts, command-line tools or credentials: Healthcare Cdss Patterns is instructions for the agent only.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
Healthcare Cdss Patterns is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
About 2.4k tokens (SKILL.md is roughly 9.4k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
Skills that share tags, products or a category with Healthcare Cdss Patterns: Clinical Trials Database (google-deepmind/science-skills, 3.2k stars), CHARLS Paper Reproduction Guide (xjtulyc/MedgeClaw, 617 stars), Biomedical Analysis Dispatch (xjtulyc/MedgeClaw, 617 stars) and Research Paper (luwill/research-skills, 862 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
affaan-m (a GitHub user) maintains it in affaan-m/ECC, which has 276,673 GitHub stars. The repository holds 683 skills in this directory. The repository was last updated on October 11, 2026.
Source: affaan-m/ECC on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.