SQL · For researchers

A skill your agent uses when a researcher needs to query biomedical databases for biomarker discovery, build target profiles from UniProt/Open Targets/STRING, rank biomarker candidates by evidence…

aws-samples/amazon-bedrock-agents-healthcare-lifesciences

Queries JGI Lakehouse (Dremio) for genomics metadata from GOLD, IMG, Mycocosm, Phytozome.

BioTender-max/awesome-bio-agent-skills

Searches and reads biomedical papers, FDA/PMDA/EMA documents, clinical trials, and protein records with the GXL Paperclip CLI and Python SDK.

K-Dense-AI/scientific-agent-skills

SiYuan Note API for searching, reading, creating, and managing blocks and documents in a self-hosted knowledge base via curl.

Tommy-yw/RunbookHermes

Expert guidance for implementing SQL on FHIR v2 ViewDefinitions and operations to create portable, tabular projections of FHIR data.

aehrc/pathling

SiYuan (思源笔记) CLI — manage notebooks, documents, blocks, and search your knowledge base from the terminal.

HKUDS/CLI-Anything

Comprehensive cheat sheet for using the Pathling Python API.

aehrc/pathling

思源笔记工具——搜索、阅读、编辑、组织用户的笔记。Use when user says: 搜索笔记、查找文档、打开文档、阅读笔记、编辑笔记、创建文档、修改块、思源笔记、SiYuan、整理文档、管理标签、Daily Note、反向链接、最近修改、PMF补丁、SQL查询blocks。不要用于与思源笔记无关的通用编程或问答任务。

LeoYeAI/openclaw-master-skills

Mass spectrometry (MS) data backend supporting import and export of MS/MS library spectra from MassBank record files.

bioMate-AI/biomate-bioconductor-kb