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NumPy · Bioinformatics
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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | Estimates reaction fluxes inside cells from steady-state carbon-13 labeling data with a bundled mfapy-based solver, and reports which fluxes the data pin down. | K-Dense-AI/ | 48k | 1 repo | ~3.2k | Automated safety check: Pass | MIT | 6 days ago |
| 2 | 2.Scvelo Performs RNA velocity analysis with scVelo from spliced and unspliced single-cell RNA counts. | K-Dense-AI/ | 48k | 1 repo | ~3.1k | Automated safety check: Pass | BSD-3-Clause | 6 days ago |
| 3 | Parse and analyze multiple sequence alignments using Biopython. | GPTomics/ | 1.2k | 3 repos | ~5.5k | Automated safety check: Pass | MIT | 1 mo ago |
| 4 | Production-ready genomics and epigenomics data processing for BixBench questions. | wu-yc/ | 1.1k | 2 repos | ~14k | Automated safety check: Pass | No licence | 6 mo ago |
| 5 | Reads, queries, and writes bigWig indexed binary signal tracks (coverage, fold-change, conservation, methylation-rate) with pyBigWig (Python) and the UCSC Kent tools (bedGraphToBigWig… | GPTomics/ | 1.2k | 1 repo | ~4.8k | Automated safety check: Pass | MIT | 1 mo ago |
| 6 | 6.Anndata Data structure for annotated matrices in single-cell analysis; use when reading/writing .h5ad (or zarr) and exchanging data with the scverse ecosystem. | aipoch/ | 1.9k | — | ~1.7k | Automated safety check: Pass | MIT | 24 days ago |
